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Genomic dissection of maternal, additive and non-additive genetic effects for growth and carcass traits in Nile tilapia

https://doi.org/10.1101/579334
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/ece3.1038openalex-snapshot
Genomic heritability estimation for the early life‐history transition related to propensity to migrate in wild rainbow and steelhead trout populations
inferredcites →https://doi.org/10.1007/bf00224533openalex-snapshot
Effective sizes of livestock populations to prevent a decline in fitness
inferredcites →https://doi.org/10.1016/0168-9525(96)81458-2openalex-snapshot
Introduction to quantitative genetics (4th edn)
inferredcites →https://doi.org/10.1016/j.ajhg.2010.11.011openalex-snapshot
GCTA: A Tool for Genome-wide Complex Trait Analysis
inferredcites →https://doi.org/10.1016/j.aquaculture.2006.03.002openalex-snapshot
Genetic improvement in Coho salmon (Oncorhynchus kisutch). I: Selection response and inbreeding depression on harvest weight
inferredcites →https://doi.org/10.1016/j.aquaculture.2009.06.001openalex-snapshot
Effects of relatedness and inbreeding on reproductive success of Nile tilapia (Oreochromis niloticus)
inferredcites →https://doi.org/10.1016/j.plantsci.2017.11.011openalex-snapshot
Genomic relationships reveal significant dominance effects for growth in hybrid Eucalyptus
inferredcites →https://doi.org/10.1016/j.tpb.2015.08.005openalex-snapshot
Comparing estimates of genetic variance across different relationship models
inferredcites →https://doi.org/10.1016/s0044-8486(00)00467-1openalex-snapshot
Effect of inbreeding on body weight at harvest in rainbow trout, Oncorhynchus mykiss
inferredcites →https://doi.org/10.1016/s0301-6226(98)00165-1openalex-snapshot
Nonadditive genetic effects and inbreeding depression for body weight in Atlantic salmon (Salmo salar L.)
inferredcites →https://doi.org/10.1017/s1357729800042636openalex-snapshot
A note on effect of inbreeding on production traits in pigs
inferredcites →https://doi.org/10.1038/ng.3865openalex-snapshot
Reevaluation of SNP heritability in complex human traits
inferredcites →https://doi.org/10.1038/ng.608openalex-snapshot
Common SNPs explain a large proportion of the heritability for human height
inferredcites →https://doi.org/10.1038/ng1761openalex-snapshot
Epistasis and the release of genetic variation during long-term selection
inferredcites →https://doi.org/10.1038/nrg3821openalex-snapshot
Relatedness in the post-genomic era: is it still useful?
inferredcites →https://doi.org/10.1038/s41437-017-0046-xopenalex-snapshot
Maternal, dominance and additive genetic effects in Nile tilapia; influence on growth, fillet yield and body size traits
inferredcites →https://doi.org/10.1042/bst0071149openalex-snapshot
Molecular Democracy: Who Shares the Controls?
inferredcites →https://doi.org/10.1071/an13016openalex-snapshot
Genomic selection for female reproduction in Australian tropically adapted beef cattle
inferredcites →https://doi.org/10.1079/asc41960121openalex-snapshot
Inbreeding – lessons from animal breeding, evolutionary biology and conservation genetics
inferredcites →https://doi.org/10.1093/jas/sky275openalex-snapshot
Evaluation of nonadditive effects in yearling weight of tropical beef cattle1
inferredcites →https://doi.org/10.1111/j.1439-0388.2012.01001.xopenalex-snapshot
Comparison of heritabilities of dairy traits in Australian Holstein-Friesian cattle from genomic and pedigree data and implications for genomic evaluations
inferredcites →https://doi.org/10.1111/j.1439-0388.2013.01001.xopenalex-snapshot
Comparison of heritabilities of dairy traits in Australian Holstein-Friesian cattle from genomic and pedigree data and implications for genomic evaluations
inferredcites →https://doi.org/10.1111/jbg.12270openalex-snapshot
“Conversion” of epistatic into additive genetic variance in finite populations and possible impact on long‐term selection response
inferredcites →https://doi.org/10.1111/jbg.12332openalex-snapshot
Some intriguing questions on Fisher's ideas about dominance
inferredcites →https://doi.org/10.1111/mec.12827openalex-snapshot
Estimating quantitative genetic parameters in wild populations: a comparison of pedigree and genomic approaches
inferredcites →https://doi.org/10.1186/1297-9686-31-1-43openalex-snapshot
Variance component analysis of skin and weight data for sheep subjected to rapid inbreeding
inferredcites →https://doi.org/10.1186/1297-9686-42-39openalex-snapshot
Epistatic QTL pairs associated with meat quality and carcass composition traits in a porcine Duroc × Pietrain population
inferredcites →https://doi.org/10.1186/1297-9686-45-32openalex-snapshot
On estimation of genetic variance within families using genome-wide identity-by-descent sharing
inferredcites →https://doi.org/10.1186/s12711-016-0185-1openalex-snapshot
Genomic BLUP including additive and dominant variation in purebreds and F1 crossbreds, with an application in pigs
inferredcites →https://doi.org/10.1186/s12711-016-0271-4openalex-snapshot
Genomic evaluation by including dominance effects and inbreeding depression for purebred and crossbred performance with an application in pigs
inferredcites →https://doi.org/10.1186/s12863-018-0609-8openalex-snapshot
Genomic heritability estimates in sweet cherry reveal non-additive genetic variance is relevant for industry-prioritized traits
inferredcites →https://doi.org/10.1186/s12864-015-2117-9openalex-snapshot
Genome wide association and genomic prediction for growth traits in juvenile farmed Atlantic salmon using a high density SNP array
inferredcites →https://doi.org/10.1186/s12864-017-3487-yopenalex-snapshot
Genomic predictions can accelerate selection for resistance against Piscirickettsia salmonis in Atlantic salmon (Salmo salar)
inferredcites →https://doi.org/10.1371/journal.pgen.1000008openalex-snapshot
Data and Theory Point to Mainly Additive Genetic Variance for Complex Traits
inferredcites →https://doi.org/10.1375/183242706778024928openalex-snapshot
A Note on the Asymptotic Distribution of Likelihood Ratio Tests to Test Variance Components
inferredcites →https://doi.org/10.1534/genetics.105.049510openalex-snapshot
Genomic-Assisted Prediction of Genetic Value With Semiparametric Procedures
inferredcites →https://doi.org/10.1534/genetics.113.155176openalex-snapshot
On the Additive and Dominant Variance and Covariance of Individuals Within the Genomic Selection Scope
inferredcites →https://doi.org/10.1534/genetics.116.199406openalex-snapshot
Orthogonal Estimates of Variances for Additive, Dominance, and Epistatic Effects in Populations
inferredcites →https://doi.org/10.2527/af.2016-0002openalex-snapshot
Genomic selection: A paradigm shift in animal breeding
inferredcites →https://doi.org/10.3168/jds.2007-0980openalex-snapshot
Efficient Methods to Compute Genomic Predictions
inferredcites →https://doi.org/10.3168/jds.2011-4223openalex-snapshot
Genomic and pedigree-based genetic parameters for scarcely recorded traits when some animals are genotyped
inferredcites →https://doi.org/10.3168/jds.2012-6435openalex-snapshot
Evaluation of inbreeding depression in Holstein cattle using whole-genome SNP markers and alternative measures of genomic inbreeding
inferredcites →https://doi.org/10.3168/jds.s0022-0302(98)75830-8openalex-snapshot
The Effects of Inbreeding on the Lifetime Performance of Dairy Cattle
inferredcites →https://doi.org/10.3389/fgene.2018.00472openalex-snapshot
Development and Validation of 58K SNP-Array and High-Density Linkage Map in Nile Tilapia (O. niloticus)

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1016/j.aquaculture.2019.734641openalex-snapshot
Genomic prediction for commercial traits using univariate and multivariate approaches in Nile tilapia (Oreochromis niloticus)
inferred← citeshttps://doi.org/10.1111/mec.17299openalex-snapshot
Dissecting the genetic architecture of quantitative traits using genome‐wide identity‐by‐descent sharing
inferred← citeshttps://doi.org/10.1186/s12711-021-00629-yopenalex-snapshot
Bayesian genomic models boost prediction accuracy for survival to Streptococcus agalactiae infection in Nile tilapia (Oreochromus nilioticus)
inferred← citeshttps://doi.org/10.21203/rs.3.rs-1182452/v1openalex-snapshot
The Addition of Epistatic Genetic Effects Increases Genomic Prediction Accuracy for Reproduction and Production Traits in Duroc Pigs Using Genomic Models
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