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Nuclear pores as versatile reference standards for quantitative superresolution microscopy
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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Probes and Tags to Study Biomolecular Function
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AGT/SNAP‐Tag: A Versatile Tag for Covalent Protein Labeling
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Subdiffraction‐Resolution Fluorescence Imaging with Conventional Fluorescent Probes
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DNA Origami as a Nanoscopic Ruler for Super‐Resolution Microscopy
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A Set of Homo‐Oligomeric Standards Allows Accurate Protein Counting
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Development of SNAP‐Tag Fluorogenic Probes for Wash‐Free Fluorescence Imaging
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Increasing the Brightness of Cyanine Fluorophores for Single‐Molecule and Superresolution Imaging
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Measuring expansion from macro‐ to nanoscale using NPC as intrinsic reporter
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Localization microscopy in yeast
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DNA Origami as a Nanoscopic Ruler For Super-Resolution Microscopy
inferredcites →https://doi.org/10.1016/j.cell.2018.06.032openalex-snapshot
Systematic Nanoscale Analysis of Endocytosis Links Efficient Vesicle Formation to Patterned Actin Nucleation
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Labeling Strategies Matter for Super-Resolution Microscopy: A Comparison between HaloTags and SNAP-tags
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Assessing resolution in super-resolution imaging
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HaloTag: A Novel Protein Labeling Technology for Cell Imaging and Protein Analysis
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Carbocyanine Dyes as Efficient Reversible Single-Molecule Optical Switch
inferredcites →https://doi.org/10.1038/msb.2013.4openalex-snapshot
Cell type‐specific nuclear pores: a case in point for context‐dependent stoichiometry of molecular machines
inferredcites →https://doi.org/10.1038/nature06170openalex-snapshot
Snapshots of nuclear pore complexes in action captured by cryo-electron tomography
inferredcites →https://doi.org/10.1038/nature15381openalex-snapshot
In situ structural analysis of the human nuclear pore complex
inferredcites →https://doi.org/10.1038/nature26003openalex-snapshot
Integrative structure and functional anatomy of a nuclear pore complex
inferredcites →https://doi.org/10.1038/nbt.3625openalex-snapshot
Protein-retention expansion microscopy of cells and tissues labeled using standard fluorescent proteins and antibodies
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Fast live-cell conventional fluorophore nanoscopy with ImageJ through super-resolution radial fluctuations
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Whole-cell 3D STORM reveals interactions between cellular structures with nanometer-scale resolution
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Optimized localization analysis for single-molecule tracking and super-resolution microscopy
inferredcites →https://doi.org/10.1038/nmeth.1768openalex-snapshot
Evaluation of fluorophores for optimal performance in localization-based super-resolution imaging
inferredcites →https://doi.org/10.1038/nmeth.1991openalex-snapshot
A simple, versatile method for GFP-based super-resolution microscopy via nanobodies
inferredcites →https://doi.org/10.1038/nmeth.2448openalex-snapshot
Measuring image resolution in optical nanoscopy
inferredcites →https://doi.org/10.1038/nmeth.2784openalex-snapshot
Single-molecule evaluation of fluorescent protein photoactivation efficiency using an in vivo nanotemplate
inferredcites →https://doi.org/10.1038/nmeth.4034openalex-snapshot
Bright photoactivatable fluorophores for single-molecule imaging
inferredcites →https://doi.org/10.1038/nmeth.4342openalex-snapshot
A DNA origami platform for quantifying protein copy number in super-resolution
inferredcites →https://doi.org/10.1038/nmeth.4605openalex-snapshot
Quantitative mapping and minimization of super-resolution optical imaging artifacts
inferredcites →https://doi.org/10.1038/nmeth.4661openalex-snapshot
Real-time 3D single-molecule localization using experimental point spread functions
inferredcites →https://doi.org/10.1038/nmeth929openalex-snapshot
Sub-diffraction-limit imaging by stochastic optical reconstruction microscopy (STORM)
inferredcites →https://doi.org/10.1038/nprot.2011.336openalex-snapshot
Direct stochastic optical reconstruction microscopy with standard fluorescent probes
inferredcites →https://doi.org/10.1038/nprot.2018.042openalex-snapshot
Generation and validation of homozygous fluorescent knock-in cells using CRISPR–Cas9 genome editing
inferredcites →https://doi.org/10.1038/s41592-019-0364-4openalex-snapshot
Super-resolution fight club: assessment of 2D and 3D single-molecule localization microscopy software
inferredcites →https://doi.org/10.1038/srep14072openalex-snapshot
One, two or three? Probing the stoichiometry of membrane proteins by single-molecule localization microscopy
inferredcites →https://doi.org/10.1038/srep15915openalex-snapshot
SIMcheck: a Toolbox for Successful Super-resolution Structured Illumination Microscopy
inferredcites →https://doi.org/10.1039/c5cc04575dopenalex-snapshot
Heavy water: a simple solution to increasing the brightness of fluorescent proteins in super-resolution imaging
inferredcites →https://doi.org/10.1046/j.1365-2818.2000.00710.xopenalex-snapshot
Surpassing the lateral resolution limit by a factor of two using structured illumination microscopy
inferredcites →https://doi.org/10.1073/pnas.0401923101openalex-snapshot
Labeling of fusion proteins with synthetic fluorophores in live cells
inferredcites →https://doi.org/10.1073/pnas.1309676110openalex-snapshot
Counting molecules in single organelles with superresolution microscopy allows tracking of the endosome maturation trajectory
inferredcites →https://doi.org/10.1073/pnas.1406593111openalex-snapshot
Characterization and development of photoactivatable fluorescent proteins for single-molecule–based superresolution imaging
inferredcites →https://doi.org/10.1073/pnas.1408071112openalex-snapshot
Stochastic approach to the molecular counting problem in superresolution microscopy
inferredcites →https://doi.org/10.1073/pnas.1621495114openalex-snapshot
Strong signal increase in STED fluorescence microscopy by imaging regions of subdiffraction extent
inferredcites →https://doi.org/10.1073/pnas.1719398115openalex-snapshot
Stoichiometry and compositional plasticity of the yeast nuclear pore complex revealed by quantitative fluorescence microscopy
inferredcites →https://doi.org/10.1073/pnas.97.15.8206openalex-snapshot
Fluorescence microscopy with diffraction resolution barrier broken by stimulated emission
inferredcites →https://doi.org/10.1101/465492openalex-snapshot
A stable, high refractive index, switching buffer for super-resolution imaging
inferredcites →https://doi.org/10.1103/physrevlett.94.108101openalex-snapshot
Short-Range Spectroscopic Ruler Based on a Single-Molecule Optical Switch
inferredcites →https://doi.org/10.1126/science.1127344openalex-snapshot
Imaging Intracellular Fluorescent Proteins at Nanometer Resolution
inferredcites →https://doi.org/10.1126/science.1153529openalex-snapshot
Three-Dimensional Super-Resolution Imaging by Stochastic Optical Reconstruction Microscopy
inferredcites →https://doi.org/10.1126/science.1232251openalex-snapshot
Actin, Spectrin, and Associated Proteins Form a Periodic Cytoskeletal Structure in Axons
inferredcites →https://doi.org/10.1126/science.1240672openalex-snapshot
Nuclear Pore Scaffold Structure Analyzed by Super-Resolution Microscopy and Particle Averaging
inferredcites →https://doi.org/10.1126/science.1250944openalex-snapshot
Polyhedra Self-Assembled from DNA Tripods and Characterized with 3D DNA-PAINT
inferredcites →https://doi.org/10.1242/jcs.098822openalex-snapshot
Super-resolution imaging visualizes the eightfold symmetry of gp210 proteins around the nuclear pore complex and resolves the central channel with nanometer resolution
inferredcites →https://doi.org/10.1242/jcs.156620openalex-snapshot
Correlative super-resolution fluorescence and electron microscopy of the nuclear pore complex with molecular resolution
inferredcites →https://doi.org/10.1364/boe.10.002708openalex-snapshot
Depth-dependent PSF calibration and aberration correction for 3D single-molecule localization
inferredcites →https://doi.org/10.1364/oe.22.029081openalex-snapshot
3D superresolution microscopy by supercritical angle detection
inferredcites →https://doi.org/10.1364/oe.24.028080openalex-snapshot
Efficient homogeneous illumination and optical sectioning for quantitative single-molecule localization microscopy
inferredcites →https://doi.org/10.1371/journal.pone.0022678openalex-snapshot
Quantitative Photo Activated Localization Microscopy: Unraveling the Effects of Photoblinking
inferredcites →https://doi.org/10.1371/journal.pone.0023794openalex-snapshot
Seamless Gene Tagging by Endonuclease-Driven Homologous Recombination
inferredcites →https://doi.org/10.1371/journal.pone.0051314openalex-snapshot
mMaple: A Photoconvertible Fluorescent Protein for Use in Multiple Imaging Modalities
inferredcites →https://doi.org/10.1529/biophysj.106.091116openalex-snapshot
Ultra-High Resolution Imaging by Fluorescence Photoactivation Localization Microscopy
inferredcites →https://doi.org/10.48550/arxiv.1501.05807openalex-snapshot
Away from resolution, assessing the information content of super-resolution images
inferredcites →https://doi.org/10.7554/elife.11349openalex-snapshot
Nanobodies: site-specific labeling for super-resolution imaging, rapid epitope-mapping and native protein complex isolation
inferredcites →https://doi.org/10.7554/elife.19071openalex-snapshot
Nuclear pore assembly proceeds by an inside-out extrusion of the nuclear envelope
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1002/ange.201905685openalex-snapshot
Direct Visualization of Single Nuclear Pore Complex Proteins Using Genetically‐Encoded Probes for DNA‐PAINT
inferred← citeshttps://doi.org/10.1002/anie.201905685openalex-snapshot
Direct Visualization of Single Nuclear Pore Complex Proteins Using Genetically‐Encoded Probes for DNA‐PAINT
inferred← citeshttps://doi.org/10.1016/bs.abl.2020.02.004openalex-snapshot
Quantitative single-molecule imaging of protein assembly in membranes
inferred← citeshttps://doi.org/10.1017/s1431927621003354openalex-snapshot
Visualization of nanostructural dislocations in microcrystalline cellulose fibrils through super-resolution fluorescence microscopy
inferred← citeshttps://doi.org/10.1038/s41556-021-00815-6openalex-snapshot
Super-resolved 3D tracking of cargo transport through nuclear pore complexes
inferred← citeshttps://doi.org/10.1038/s41556-024-01595-5openalex-snapshot
The nuclear matrix stabilizes primed-specific genes in human pluripotent stem cells
inferred← citeshttps://doi.org/10.1038/s41581-020-00337-8openalex-snapshot
Advances in fluorescence microscopy techniques to study kidney function
inferred← citeshttps://doi.org/10.1038/s41583-021-00441-zopenalex-snapshot
Advanced imaging and labelling methods to decipher brain cell organization and function
inferred← citeshttps://doi.org/10.1038/s41586-025-08738-0openalex-snapshot
Overlapping nuclear import and export paths unveiled by two-colour MINFLUX
inferred← citeshttps://doi.org/10.1038/s41587-022-01519-4openalex-snapshot
MINSTED nanoscopy enters the Ångström localization range
inferred← citeshttps://doi.org/10.1038/s41592-019-0688-0openalex-snapshot
MINFLUX nanoscopy delivers 3D multicolor nanometer resolution in cells
inferred← citeshttps://doi.org/10.1038/s41592-020-01005-2openalex-snapshot
Click-ExM enables expansion microscopy for all biomolecules
inferred← citeshttps://doi.org/10.1038/s41592-020-0869-xopenalex-snapshot
Up to 100-fold speed-up and multiplexing in optimized DNA-PAINT
inferred← citeshttps://doi.org/10.1038/s41592-020-0918-5openalex-snapshot
Optimizing imaging speed and excitation intensity for single-molecule localization microscopy
inferred← citeshttps://doi.org/10.1038/s41592-021-01154-yopenalex-snapshot
A pairwise distance distribution correction (DDC) algorithm to eliminate blinking-caused artifacts in SMLM
inferred← citeshttps://doi.org/10.1038/s41592-021-01236-xopenalex-snapshot
Deep learning enables fast and dense single-molecule localization with high accuracy
inferred← citeshttps://doi.org/10.1038/s41592-021-01338-6openalex-snapshot
Caveat fluorophore: an insiders’ guide to small-molecule fluorescent labels
inferred← citeshttps://doi.org/10.1038/s41592-022-01465-8openalex-snapshot
Optimal precision and accuracy in 4Pi-STORM using dynamic spline PSF models
inferred← citeshttps://doi.org/10.1038/s41592-022-01577-1openalex-snapshot
DNA-PAINT MINFLUX nanoscopy
inferred← citeshttps://doi.org/10.1038/s41592-022-01676-zopenalex-snapshot
Maximum-likelihood model fitting for quantitative analysis of SMLM data
inferred← citeshttps://doi.org/10.1038/s41592-022-01694-xopenalex-snapshot
Assessment of 3D MINFLUX data for quantitative structural biology in cells
inferred← citeshttps://doi.org/10.1038/s41592-022-01695-wopenalex-snapshot
Reply to: Assessment of 3D MINFLUX data for quantitative structural biology in cells
inferred← citeshttps://doi.org/10.1038/s41592-023-01775-5openalex-snapshot
Field-dependent deep learning enables high-throughput whole-cell 3D super-resolution imaging
inferred← citeshttps://doi.org/10.1038/s41592-023-02053-0openalex-snapshot
Genetically encoded multimeric tags for subcellular protein localization in cryo-EM
inferred← citeshttps://doi.org/10.1038/s41592-024-02376-6openalex-snapshot
ProDOL: a general method to determine the degree of labeling for staining optimization and molecular counting
inferred← citeshttps://doi.org/10.1038/s41592-024-02498-xopenalex-snapshot
Single-molecule dynamic structural biology with vertically arranged DNA on a fluorescence microscope
inferred← citeshttps://doi.org/10.1038/s41592-025-02731-1openalex-snapshot
Super-resolution microscopy for structural biology
inferred← citeshttps://doi.org/10.1038/s41596-020-00428-7openalex-snapshot
Implementation of a 4Pi-SMS super-resolution microscope
inferred← citeshttps://doi.org/10.1038/s41596-022-00730-6openalex-snapshot
Constructing a cost-efficient, high-throughput and high-quality single-molecule localization microscope for super-resolution imaging
inferred← citeshttps://doi.org/10.1038/s41596-024-00989-xopenalex-snapshot
Build and operation of a custom 3D, multicolor, single-molecule localization microscope
inferred← citeshttps://doi.org/10.1038/s42003-025-07967-3openalex-snapshot
Microtubules as a versatile reference standard for expansion microscopy
inferred← citeshttps://doi.org/10.1093/bioinformatics/btad587openalex-snapshot
Simulating structurally variable nuclear pore complexes for microscopy
inferred← citeshttps://doi.org/10.1101/579961openalex-snapshot
Direct visualization of single nuclear pore complex proteins using genetically-encoded probes for DNA-PAINT
inferred← citeshttps://doi.org/10.1101/626853openalex-snapshot
Photoactivation of silicon rhodamines via a light-induced protonation
inferred← citeshttps://doi.org/10.1111/jmi.13236openalex-snapshot
Modelling 3D supramolecular structure from sparse single‐molecule localisation microscopy data
inferred← citeshttps://doi.org/10.1186/s12915-023-01685-0openalex-snapshot
Quantitative determination of fluorescence labeling implemented in cell cultures
inferred← citeshttps://doi.org/10.1364/ol.397754openalex-snapshot
Accurate 4Pi single-molecule localization using an experimental PSF model
inferred← citeshttps://doi.org/10.1371/journal.pcbi.1008479openalex-snapshot
FOCAL3D: A 3-dimensional clustering package for single-molecule localization microscopy
inferred← citeshttps://doi.org/10.18174/529415openalex-snapshot
Pinpointing macromolecular motion : Single-particle tracking fluorescence microscopy advances and applications
inferred← citeshttps://doi.org/10.18687/laccei2023.1.1.1595openalex-snapshot
Improving the resolution of STED microscopy using the SUPPOSe algorithm
inferred← citeshttps://doi.org/10.20944/preprints201908.0319.v1openalex-snapshot
Between Life and Death: Reducing Phototoxicity in Super-Resolution Microscopy
inferred← citeshttps://doi.org/10.20944/preprints202102.0173.v1openalex-snapshot
At the molecular resolution with MINFLUX?
inferred← citeshttps://doi.org/10.21203/rs.3.pex-1710/v1openalex-snapshot
Super-resolved 3D Tracking of Cargo Transport Through Nuclear Pore Complexes by Astigmatism Imaging
inferred← citeshttps://doi.org/10.3389/fnsyn.2019.00023openalex-snapshot
Interrogating Synaptic Architecture: Approaches for Labeling Organelles and Cytoskeleton Components
inferred← citeshttps://doi.org/10.70675/5ea3123bzae80z4126z9c92zc258750a4effopenalex-snapshot
Approches tri-dimensionnelles et multicolores en microscopie de fluorescence super-résolue pour la biologie
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