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Is mechanical receptor ligand dissociation driven by unfolding or unbinding?

https://doi.org/10.1101/593335
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/ange.201605284openalex-snapshot
Direct Identification of Protein–Protein Interactions by Single‐Molecule Force Spectroscopy
inferredcites →https://doi.org/10.1002/anie.201605284openalex-snapshot
Direct Identification of Protein–Protein Interactions by Single‐Molecule Force Spectroscopy
inferredcites →https://doi.org/10.1002/j.1460-2075.1996.tb00960.xopenalex-snapshot
Crystal structure of a bacterial family‐III cellulose‐binding domain: a general mechanism for attachment to cellulose.
inferredcites →https://doi.org/10.1002/jmr.926openalex-snapshot
Engineering a reversible, high‐affinity system for efficient protein purification based on the cohesin–dockerin interaction
inferredcites →https://doi.org/10.1002/tcr.20160openalex-snapshot
From cellulosomes to cellulosomics
inferredcites →https://doi.org/10.1006/jmbi.1999.3046openalex-snapshot
Molecular architecture of the rod domain of the Dictyostelium gelation factor (ABP120)
inferredcites →https://doi.org/10.1006/jmbi.2000.3945openalex-snapshot
Specificity in protein-protein interactions: the structural basis for dual recognition in endonuclease colicin-immunity protein complexes
inferredcites →https://doi.org/10.1016/0167-2789(92)90242-fopenalex-snapshot
Nonlinear total variation based noise removal algorithms
inferredcites →https://doi.org/10.1016/j.cpc.2010.04.018openalex-snapshot
NWChem: A comprehensive and scalable open-source solution for large scale molecular simulations
inferredcites →https://doi.org/10.1016/j.jsb.2016.02.011openalex-snapshot
Single-molecule force spectroscopy on polyproteins and receptor–ligand complexes: The current toolbox
inferredcites →https://doi.org/10.1016/j.pep.2005.01.016openalex-snapshot
Protein production by auto-induction in high-density shaking cultures
inferredcites →https://doi.org/10.1016/s0006-3495(97)78802-7openalex-snapshot
Dynamic strength of molecular adhesion bonds
inferredcites →https://doi.org/10.1016/s0006-3495(97)78804-0openalex-snapshot
Molecular dynamics study of unbinding of the avidin-biotin complex
inferredcites →https://doi.org/10.1016/s0092-8674(03)00809-2openalex-snapshot
A “dock, lock, and latch” Structural Model for a Staphylococcal Adhesin Binding to Fibrinogen
inferredcites →https://doi.org/10.1021/bi00042a005openalex-snapshot
Protein-Protein Interactions in Colicin E9 DNase-Immunity Protein Complexes. 2. Cognate and Noncognate Interactions That Span the Millilmolar to Femptomolar Affinity Range
inferredcites →https://doi.org/10.1021/jacs.7b02958openalex-snapshot
Rapid Characterization of a Mechanically Labile α-Helical Protein Enabled by Efficient Site-Specific Bioconjugation
inferredcites →https://doi.org/10.1021/jacs.7b07574openalex-snapshot
Combining in Vitro and in Silico Single-Molecule Force Spectroscopy to Characterize and Tune Cellulosomal Scaffoldin Mechanics
inferredcites →https://doi.org/10.1021/ma020751gopenalex-snapshot
Stretching Response of Discrete Semiflexible Polymers
inferredcites →https://doi.org/10.1038/nature09295openalex-snapshot
A mechanically stabilized receptor–ligand flex-bond important in the vasculature
inferredcites →https://doi.org/10.1038/ncomms6635openalex-snapshot
Ultrastable cellulosome-adhesion complex tightens under load
inferredcites →https://doi.org/10.1038/nmeth.1318openalex-snapshot
Enzymatic assembly of DNA molecules up to several hundred kilobases
inferredcites →https://doi.org/10.1038/nsmb705openalex-snapshot
A mechanical unfolding intermediate in an actin-crosslinking protein
inferredcites →https://doi.org/10.1038/s42254-018-0001-7openalex-snapshot
Atomic force microscopy-based mechanobiology
inferredcites →https://doi.org/10.1063/1.1143970openalex-snapshot
Calibration of atomic-force microscope tips
inferredcites →https://doi.org/10.1073/pnas.0507705102openalex-snapshot
Genetically encoded short peptide tag for versatile protein labeling by Sfp phosphopantetheinyl transferase
inferredcites →https://doi.org/10.1073/pnas.0813093106openalex-snapshot
On the remarkable mechanostability of scaffoldins and the mechanical clamp motif
inferredcites →https://doi.org/10.1073/pnas.0902312106openalex-snapshot
The titin-telethonin complex is a directed, superstable molecular bond in the muscle Z-disk
inferredcites →https://doi.org/10.1073/pnas.0910756107openalex-snapshot
The structural and energetic basis for high selectivity in a high-affinity protein-protein interaction
inferredcites →https://doi.org/10.1073/pnas.0913736107openalex-snapshot
Structural insight into M-band assembly and mechanics from the titin-obscurin-like-1 complex
inferredcites →https://doi.org/10.1073/pnas.1105734108openalex-snapshot
Fast-folding α-helices as reversible strain absorbers in the muscle protein myomesin
inferredcites →https://doi.org/10.1073/pnas.1211929109openalex-snapshot
Single-molecule dissection of the high-affinity cohesin–dockerin complex
inferredcites →https://doi.org/10.1073/pnas.1936124100openalex-snapshot
Cellulosome assembly revealed by the crystal structure of the cohesin–dockerin complex
inferredcites →https://doi.org/10.1074/jbc.m009237200openalex-snapshot
Cohesin-Dockerin Interaction in Cellulosome Assembly
inferredcites →https://doi.org/10.1074/jbc.m113.466672openalex-snapshot
Atypical Cohesin-Dockerin Complex Responsible for Cell Surface Attachment of Cellulosomal Components
inferredcites →https://doi.org/10.1088/0957-4484/22/49/494005openalex-snapshot
Nanoengineering a single-molecule mechanical switch using DNA self-assembly
inferredcites →https://doi.org/10.1088/1361-6501/28/3/034010openalex-snapshot
Comparing AFM cantilever stiffness measured using the thermal vibration and the improved thermal vibration methods with that of an SI traceable method based on MEMS
inferredcites →https://doi.org/10.1088/1478-3975/12/5/056009openalex-snapshot
Energy profile of nanobody–GFP complex under force
inferredcites →https://doi.org/10.1109/lsp.2013.2278339openalex-snapshot
A Direct Algorithm for 1-D Total Variation Denoising
inferredcites →https://doi.org/10.1109/mcse.2007.55openalex-snapshot
Matplotlib: A 2D Graphics Environment
inferredcites →https://doi.org/10.1109/mcse.2010.145openalex-snapshot
Automatic Lip-Contour Extraction and Mouth-Structure Segmentation in Images
inferredcites →https://doi.org/10.1109/mcse.2011.37openalex-snapshot
The NumPy Array: A Structure for Efficient Numerical Computation
inferredcites →https://doi.org/10.1111/mmi.12663openalex-snapshot
The binding force of the staphylococcal adhesin SdrG is remarkably strong
inferredcites →https://doi.org/10.1126/science.1239764openalex-snapshot
High-Speed Force Spectroscopy Unfolds Titin at the Velocity of Molecular Dynamics Simulations
inferredcites →https://doi.org/10.1126/science.1254211openalex-snapshot
The minimal cadherin-catenin complex binds to actin filaments under force
inferredcites →https://doi.org/10.1126/science.aah7124openalex-snapshot
Hidden dynamics in the unfolding of individual bacteriorhodopsin proteins
inferredcites →https://doi.org/10.1126/science.aar2094openalex-snapshot
Molecular mechanism of extreme mechanostability in a pathogen adhesin
inferredcites →https://doi.org/10.1201/9781315140919openalex-snapshot
Density Estimation for Statistics and Data Analysis
inferredcites →https://doi.org/10.1371/journal.pbio.1001489openalex-snapshot
A Force-Activated Trip Switch Triggers Rapid Dissociation of a Colicin from Its Immunity Protein
inferredcites →https://doi.org/10.1529/biophysj.107.114397openalex-snapshot
Direct Observation of Active Protein Folding Using Lock-in Force Spectroscopy
inferredcites →https://doi.org/10.1529/biophysj.108.129999openalex-snapshot
Comparing Proteins by Their Unfolding Pattern
inferredcites →https://doi.org/10.3791/50950openalex-snapshot
Investigating Receptor-ligand Systems of the Cellulosome with AFM-based Single-molecule Force Spectroscopy
inferredcites →https://doi.org/10.7554/elife.06633openalex-snapshot
Ventromedial hypothalamic neurons control a defensive emotion state
inferredcites →https://doi.org/10.7554/elife.10319openalex-snapshot
Resolving dual binding conformations of cellulosome cohesin-dockerin complexes using single-molecule force spectroscopy

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1016/j.sbi.2019.11.012openalex-snapshot
Extreme mechanical stability in protein complexes
inferred← citeshttps://doi.org/10.1021/acs.jpclett.0c03852openalex-snapshot
Pioglitazone Inhibits Metal Cluster Transfer of mitoNEET by Stabilizing the Labile Fe–N Bond Revealed at Single-Bond Level
inferred← citeshttps://doi.org/10.1021/acs.nanolett.9b00639openalex-snapshot
Dronpa: A Light-Switchable Fluorescent Protein for Opto-Biomechanics
inferred← citeshttps://doi.org/10.1021/acs.nanolett.9b02062openalex-snapshot
Removal of a Conserved Disulfide Bond Does Not Compromise Mechanical Stability of a VHH Antibody Complex
inferred← citeshttps://doi.org/10.1038/s41565-023-01536-7openalex-snapshot
Single-molecule force stability of the SARS-CoV-2–ACE2 interface in variants-of-concern
inferred← citeshttps://doi.org/10.1101/2020.09.27.315796openalex-snapshot
A Tethered Ligand Assay to Probe the SARS-CoV-2 ACE2 Interaction under Constant Force
inferred← citeshttps://doi.org/10.1111/febs.15155openalex-snapshot
Catalytic subunit exchanges in the cellulosomes produced by Ruminiclostridium cellulolyticum suggest unexpected dynamics and adaptability of their enzymatic composition
inferred← citeshttps://doi.org/10.3390/biomimetics9040192openalex-snapshot
Identification of Individual Target Molecules Using Antibody-Decorated DeepTipTM Atomic-Force Microscopy Probes
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