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The small noncoding RNA sr8384 determines solvent synthesis and cell growth in industrial solventogenic clostridia

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/biof.5520170110openalex-snapshot

Is there a role of glutathione peroxidases in signaling and differentiation?

inferredcites →https://doi.org/10.1002/bit.26077openalex-snapshot

Efficient gene knockdown in Clostridium acetobutylicum by synthetic small regulatory RNAs

inferredcites →https://doi.org/10.1007/978-1-61779-197-0_23openalex-snapshot

ClosTron-Mediated Engineering of Clostridium

inferredcites →https://doi.org/10.1007/s00253-014-5569-yopenalex-snapshot

Small RNA regulators in bacteria: powerful tools for metabolic engineering and synthetic biology

inferredcites →https://doi.org/10.1007/s00253-016-7638-xopenalex-snapshot

Roles of three AbrBs in regulating two-phase Clostridium acetobutylicum fermentation

inferredcites →https://doi.org/10.1016/j.abb.2011.10.005openalex-snapshot

Contrasting catalytic and allosteric mechanisms for phosphoglycerate dehydrogenases

inferredcites →https://doi.org/10.1016/j.biotechadv.2018.02.012openalex-snapshot

Metabolic regulation in solventogenic clostridia: regulators, mechanisms and engineering

inferredcites →https://doi.org/10.1016/j.copbio.2011.10.008openalex-snapshot

Clostridia: the importance of their exceptional substrate and metabolite diversity for biofuel and biorefinery applications

inferredcites →https://doi.org/10.1016/j.mib.2011.12.001openalex-snapshot

Rewiring two-component signal transduction with small RNAs

inferredcites →https://doi.org/10.1016/j.ymben.2009.12.004openalex-snapshot

A genomic-library based discovery of a novel, possibly synthetic, acid-tolerance mechanism in Clostridium acetobutylicum involving non-coding RNAs and ribosomal RNA processing

inferredcites →https://doi.org/10.1021/acssynbio.7b00155openalex-snapshot

Rapid Generation of Universal Synthetic Promoters for Controlled Gene Expression in Both Gas-Fermenting and Saccharolytic Clostridium Species

inferredcites →https://doi.org/10.1038/cr.2007.91openalex-snapshot

Targeted gene disruption by use of a group II intron (targetron) vector in Clostridium acetobutylicum

inferredcites →https://doi.org/10.1038/nprot.2013.105openalex-snapshot

Design and use of synthetic regulatory small RNAs to control gene expression in Escherichia coli

inferredcites →https://doi.org/10.1039/c4mb00600copenalex-snapshot

Comparative transcriptome analysis between csrA -disruption Clostridium acetobutylicum and its parent strain

inferredcites →https://doi.org/10.1042/bst20120042openalex-snapshot

Non-coding RNAs in Saccharomyces cerevisiae: what is the function?

inferredcites →https://doi.org/10.1093/bioinformatics/btn544openalex-snapshot

IntaRNA: efficient prediction of bacterial sRNA targets incorporating target site accessibility and seed regions

inferredcites →https://doi.org/10.1093/bioinformatics/btp252openalex-snapshot

PseudoViewer3: generating planar drawings of large-scale RNA structures with pseudoknots

inferredcites →https://doi.org/10.1093/femsle/fnw063openalex-snapshot

Overexpression of two stress-responsive, small, non-coding RNAs, 6S and tmRNA, imparts butanol tolerance inClostridium acetobutylicum

inferredcites →https://doi.org/10.1093/femsle/fnw065openalex-snapshot

Development of an inducible transposon system for efficient random mutagenesis inClostridium acetobutylicum

inferredcites →https://doi.org/10.1093/nar/gkg297openalex-snapshot

A survey of small RNA-encoding genes in Escherichia coli

inferredcites →https://doi.org/10.1093/nar/gkt651openalex-snapshot

Synthetic tolerance: three noncoding small RNAs, DsrA, ArcZ and RprA, acting supra-additively against acid stress

inferredcites →https://doi.org/10.1093/nar/gkx922openalex-snapshot

20 years of the SMART protein domain annotation resource

inferredcites →https://doi.org/10.1101/cshperspect.a003798openalex-snapshot

Bacterial Small RNA Regulators: Versatile Roles and Rapidly Evolving Variations

inferredcites →https://doi.org/10.1101/gad.901001openalex-snapshot

Identification of novel small RNAs using comparative genomics and microarrays

inferredcites →https://doi.org/10.1111/j.1365-2958.2006.05384.xopenalex-snapshot

The small untranslated RNA SR1 from the Bacillus subtilis genome is involved in the regulation of arginine catabolism

inferredcites →https://doi.org/10.1111/mmi.12894openalex-snapshot

A novel three‐component system‐based regulatory model for d ‐xylose sensing and transport in C lostridium beijerinckii

inferredcites →https://doi.org/10.1128/aem.00597-18openalex-snapshot

Small and Low but Potent: the Complex Regulatory Role of the Small RNA SolB in Solventogenesis in Clostridium acetobutylicum

inferredcites →https://doi.org/10.1128/aem.00644-11openalex-snapshot

Confirmation and Elimination of Xylose Metabolism Bottlenecks in Glucose Phosphoenolpyruvate-Dependent Phosphotransferase System-Deficient Clostridium acetobutylicum for Simultaneous Utilization of Glucose, Xylose, and Arabinose

inferredcites →https://doi.org/10.1128/aem.53.12.2854-2861.1987openalex-snapshot

Effect of Butanol Challenge and Temperature on Lipid Composition and Membrane Fluidity of Butanol-Tolerant Clostridium acetobutylicum

inferredcites →https://doi.org/10.1128/aem.54.11.2717-2722.1988openalex-snapshot

Thiolase from Clostridium acetobutylicum ATCC 824 and Its Role in the Synthesis of Acids and Solvents

inferredcites →https://doi.org/10.1128/aem.71.12.8442-8450.2005openalex-snapshot

Adaptive Responses to Oxygen Stress in Obligatory Anaerobes Clostridium acetobutylicum and Clostridium aminovalericum

inferredcites →https://doi.org/10.1128/jb.183.16.4823-4838.2001openalex-snapshot

Genome Sequence and Comparative Analysis of the Solvent-Producing Bacterium Clostridium acetobutylicum

inferredcites →https://doi.org/10.1128/jb.184.13.3586-3597.2002openalex-snapshot

Northern, Morphological, and Fermentation Analysis of spo0A Inactivation and Overexpression in Clostridium acetobutylicum ATCC 824

inferredcites →https://doi.org/10.1128/jb.186.7.1959-1971.2004openalex-snapshot

Transcriptional Analysis of spo0A Overexpression in Clostridium acetobutylicum and Its Effect on the Cell's Response to Butanol Stress

inferredcites →https://doi.org/10.1128/mbio.00340-10openalex-snapshot

Small RNAs in the GenusClostridium

inferredcites →https://doi.org/10.1128/mbio.02004-16openalex-snapshot

A Flexible Binding Site Architecture Provides New Insights into CcpA Global Regulation in Gram-Positive Bacteria

inferredcites →https://doi.org/10.1128/mr.50.4.484-524.1986openalex-snapshot

Acetone-butanol fermentation revisited

inferredcites →https://doi.org/10.1186/1471-2164-13-349openalex-snapshot

Pleiotropic functions of catabolite control protein CcpA in Butanol-producing Clostridium acetobutylicum

inferredcites →https://doi.org/10.1186/1471-2164-14-849openalex-snapshot

The Clostridium small RNome that responds to stress: the paradigm and importance of toxic metabolite stress in C. acetobutylicum

inferredcites →https://doi.org/10.1186/s13068-017-0743-yopenalex-snapshot

Systematic and functional identification of small non-coding RNAs associated with exogenous biofuel stress in cyanobacterium Synechocystis sp. PCC 6803

inferredcites →https://doi.org/10.1196/annals.1419.009openalex-snapshot

Fermentative Butanol Production

inferredcites →https://doi.org/10.1261/rna.061564.117openalex-snapshot

A resource for functional profiling of noncoding RNA in the yeast Saccharomyces cerevisiae

inferredcites →https://doi.org/10.1371/journal.pone.0016693openalex-snapshot

Group II Intron-Anchored Gene Deletion in Clostridium

inferredcites →https://doi.org/10.4161/rna.28036openalex-snapshot

Small regulatory RNAs from low-GC Gram-positive bacteria

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.3390/fermentation10060297openalex-snapshot

Molecular Markers and Regulatory Networks in Solventogenic Clostridium Species: Metabolic Engineering Conundrum

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