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ASFVdb: An integrative resource for genomics and proteomics analyses of African swine fever

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/0471250953.bi0104s17openalex-snapshot
The UCSC Genome Browser
inferredcites →https://doi.org/10.1006/jmbi.2000.4315openalex-snapshot
Predicting transmembrane protein topology with a hidden markov model: application to complete genomes11Edited by F. Cohen
inferredcites →https://doi.org/10.1006/viro.1996.0193openalex-snapshot
Functional and Immunological Properties of the Baculovirus-Expressed Hemagglutinin of African Swine Fever Virus
inferredcites →https://doi.org/10.1007/s11262-014-1156-7openalex-snapshot
Comparative analysis of the complete genome sequences of Kenyan African swine fever virus isolates within p72 genotypes IX and X
inferredcites →https://doi.org/10.1016/0040-5809(75)90020-9openalex-snapshot
On the number of segregating sites in genetical models without recombination
inferredcites →https://doi.org/10.1016/j.jviromet.2018.07.015openalex-snapshot
Complete genome sequence of an African swine fever virus (ASFV POL/2015/Podlaskie) determined directly from pig erythrocyte-associated nucleic acid
inferredcites →https://doi.org/10.1016/j.vaccine.2014.05.051openalex-snapshot
Modern adjuvants do not enhance the efficacy of an inactivated African swine fever virus vaccine preparation
inferredcites →https://doi.org/10.1016/j.virol.2010.01.019openalex-snapshot
Phylogenomic analysis of 11 complete African swine fever virus genome sequences
inferredcites →https://doi.org/10.1016/j.virusres.2012.10.012openalex-snapshot
Antibody-mediated neutralization of African swine fever virus: Myths and facts
inferredcites →https://doi.org/10.1016/j.virusres.2019.03.022openalex-snapshot
Development of vaccines against African swine fever virus
inferredcites →https://doi.org/10.1016/s0065-3527(08)60714-9openalex-snapshot
African Swine Fever
inferredcites →https://doi.org/10.1016/s0368-1742(21)80031-4openalex-snapshot
On A Form of Swine Fever Occurring in British East Africa (Kenya Colony)
inferredcites →https://doi.org/10.1016/s0378-1135(98)00187-4openalex-snapshot
African swine fever virus infection of the bushpig (Potamochoerus porcus) and its significance in the epidemiology of the disease
inferredcites →https://doi.org/10.1017/s0016672300014634openalex-snapshot
The hitch-hiking effect of a favourable gene
inferredcites →https://doi.org/10.1038/360232a0openalex-snapshot
Crystal structure at 2.8 Å resolution of a soluble form of the cell adhesion molecule CD2
inferredcites →https://doi.org/10.1038/s41598-018-24740-1openalex-snapshot
Deletion at the 5’-end of Estonian ASFV strains associated with an attenuated phenotype
inferredcites →https://doi.org/10.1039/c6mb00241bopenalex-snapshot
MSLVP: prediction of multiple subcellular localization of viral proteins using a support vector machine
inferredcites →https://doi.org/10.1093/bioinformatics/bti403openalex-snapshot
VariScan: Analysis of evolutionary patterns from large-scale DNA sequence polymorphism data
inferredcites →https://doi.org/10.1093/bioinformatics/btl158openalex-snapshot
Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences
inferredcites →https://doi.org/10.1093/bioinformatics/btn122openalex-snapshot
UniProtJAPI: a remote API for accessing UniProt data
inferredcites →https://doi.org/10.1093/bioinformatics/btq665openalex-snapshot
Mugsy: fast multiple alignment of closely related whole genomes
inferredcites →https://doi.org/10.1093/bioinformatics/btw051openalex-snapshot
S weep F inder 2: increased sensitivity, robustness and flexibility
inferredcites →https://doi.org/10.1093/bioinformatics/btw474openalex-snapshot
MSAViewer: interactive JavaScript visualization of multiple sequence alignments
inferredcites →https://doi.org/10.1093/nar/28.1.235openalex-snapshot
The Protein Data Bank
inferredcites →https://doi.org/10.1093/nar/gkh131openalex-snapshot
UniProt: the Universal Protein knowledgebase
inferredcites →https://doi.org/10.1093/nar/gkh340openalex-snapshot
MUSCLE: multiple sequence alignment with high accuracy and high throughput
inferredcites →https://doi.org/10.1093/nar/gkl031openalex-snapshot
WEGO: a web tool for plotting GO annotations
inferredcites →https://doi.org/10.1093/nar/gkn201openalex-snapshot
NCBI BLAST: a better web interface
inferredcites →https://doi.org/10.1093/nar/gkq901openalex-snapshot
ViralZone: a knowledge resource to understand virus diversity
inferredcites →https://doi.org/10.1093/nar/gky1004openalex-snapshot
RCSB Protein Data Bank: biological macromolecular structures enabling research and education in fundamental biology, biomedicine, biotechnology and energy
inferredcites →https://doi.org/10.1098/rstb.2009.0098openalex-snapshot
African swine fever: how can global spread be prevented?
inferredcites →https://doi.org/10.1099/vir.0.070508-0openalex-snapshot
Related strains of African swine fever virus with different virulence: genome comparison and analysis
inferredcites →https://doi.org/10.1099/vir.0.83343-0openalex-snapshot
Comparison of the genome sequences of non-pathogenic and pathogenic African swine fever virus isolates
inferredcites →https://doi.org/10.1101/gr.082081.108openalex-snapshot
genBlastA: Enabling BLAST to identify homologous gene sequences
inferredcites →https://doi.org/10.1101/gr.4252305openalex-snapshot
Genomic scans for selective sweeps using SNP data
inferredcites →https://doi.org/10.1111/tbed.13124openalex-snapshot
Genome comparison of African swine fever virus China/2018/Anhui XCGQ strain and related European p72 Genotype II strains
inferredcites →https://doi.org/10.1128/jvi.01058-17openalex-snapshot
BA71ΔCD2: a New Recombinant Live Attenuated African Swine Fever Virus with Cross-Protective Capabilities
inferredcites →https://doi.org/10.1128/jvi.67.9.5312-5320.1993openalex-snapshot
African swine fever virus encodes a CD2 homolog responsible for the adhesion of erythrocytes to infected cells
inferredcites →https://doi.org/10.1186/1471-2105-5-113openalex-snapshot
MUSCLE: a multiple sequence alignment method with reduced time and space complexity
inferredcites →https://doi.org/10.1186/1471-2105-7-409openalex-snapshot
Genome-wide DNA polymorphism analyses using VariScan
inferredcites →https://doi.org/10.1186/s12859-017-1479-1openalex-snapshot
Visualizing phylogenetic tree landscapes
inferredcites →https://doi.org/10.1186/s12859-018-2283-2openalex-snapshot
phylotree.js - a JavaScript library for application development and interactive data visualization in phylogenetics
inferredcites →https://doi.org/10.1371/journal.pone.0009490openalex-snapshot
FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments
inferredcites →https://doi.org/10.1534/genetics.104.035097openalex-snapshot
A Composite-Likelihood Approach for Detecting Directional Selection From DNA Sequence Data
inferredcites →https://doi.org/10.3201/eid1412.080591openalex-snapshot
African Swine Fever Virus Isolate, Georgia, 2007
inferredcites →https://doi.org/10.3201/eid1704.101283openalex-snapshot
Genomic Analysis of Highly Virulent Georgia 2007/1 Isolate of African Swine Fever Virus
inferredcites →https://doi.org/10.3390/genes9020070openalex-snapshot
Genome-Wide Identification and Expression Analysis of the HD-Zip Gene Family in Wheat (Triticum aestivum L.)
inferredcites →https://doi.org/10.3390/v9050103openalex-snapshot
African Swine Fever Virus: A Review
inferredcites →https://doi.org/10.3390/vaccines7010012openalex-snapshot
DNA-Protein Vaccination Strategy Does Not Protect from Challenge with African Swine Fever Virus Armenia 2007 Strain

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1038/s41598-021-92593-2openalex-snapshot
The first genotype II African swine fever virus isolated in Africa provides insight into the current Eurasian pandemic
inferred← citeshttps://doi.org/10.1128/jvi.00119-20openalex-snapshot
The African Swine Fever Virus Transcriptome
inferred← citeshttps://doi.org/10.1128/mra.00185-20openalex-snapshot
Coding-Complete Genome Sequence of an African Swine Fever Virus Strain Liv13/33 Isolate from Experimental Transmission between Pigs and Ornithodoros moubata Ticks
inferred← citeshttps://doi.org/10.3389/fvets.2020.00084openalex-snapshot
Progress Toward Development of Effective and Safe African Swine Fever Virus Vaccines
inferred← citeshttps://doi.org/10.70675/ca486be7zdd6dz43dbz8237z6917b547a431openalex-snapshot
Mechanisms and drivers of African swine fever virus vectorial transmission : examination of various tick-virus associations
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