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De novo Transcriptome Characterization of Iris atropurpurea (the Royal Iris, Iris section Oncocyclus ) and Phylogenetic Analysis of MADS-box and R2R3-MYB Gene Families
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Outgoing claims: the papers this work cites, builds on, or argues with.
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Subgeneric classification in Iris re‐examined using chloroplast sequence data
inferredcites →https://doi.org/10.1007/pl00006285openalex-snapshot
Molecular Evolution of the Myb Family of Transcription Factors: Evidence for Polyphyletic Origin
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Exploiting EST databases for the development and characterization of gene-derived SSR-markers in barley (Hordeum vulgare L.)
inferredcites →https://doi.org/10.1007/s00239-002-2426-xopenalex-snapshot
Genomewide Structural Annotation and Evolutionary Analysis of the Type I MADS-Box Genes in Plants
inferredcites →https://doi.org/10.1007/s00438-006-0147-3openalex-snapshot
Characterization and expression of 42 MADS-box genes in wheat (Triticum aestivum L.)
inferredcites →https://doi.org/10.1007/s00442-005-0246-6openalex-snapshot
Morning floral heat as a reward to the pollinators of the Oncocyclus irises
inferredcites →https://doi.org/10.1007/s10531-010-9883-0openalex-snapshot
Application of complex conservation strategy to Iris atrofusca of the Northern Negev, Israel
inferredcites →https://doi.org/10.1007/s11103-005-2910-yopenalex-snapshot
The MYB Transcription Factor Superfamily of Arabidopsis: Expression Analysis and Phylogenetic Comparison with the Rice MYB Family
inferredcites →https://doi.org/10.1007/s11103-013-0125-1openalex-snapshot
De novo transcriptome analysis of an imminent biofuel crop, Camelina sativa L. using Illumina GAIIX sequencing platform and identification of SSR markers
inferredcites →https://doi.org/10.1007/s12298-013-0179-1openalex-snapshot
MYB transcription factor genes as regulators for plant responses: an overview
inferredcites →https://doi.org/10.1016/j.devcel.2015.10.022openalex-snapshot
A bHLH-Based Feedback Loop Restricts Vascular Cell Proliferation in Plants
inferredcites →https://doi.org/10.1016/j.ecoenv.2017.06.071openalex-snapshot
De novo characterization of the Iris lactea var. chinensis transcriptome and an analysis of genes under cadmium or lead exposure
inferredcites →https://doi.org/10.1016/j.gene.2003.09.049openalex-snapshot
Ordered origin of the typical two- and three-repeat Myb genes
inferredcites →https://doi.org/10.1016/j.gene.2013.08.067openalex-snapshot
Transcriptome sequencing and phylogenetic analysis of floral and leaf MIKCC MADS-box and R2R3 MYB transcription factors from the monocot Iris fulva
inferredcites →https://doi.org/10.1016/j.plaphy.2016.01.009openalex-snapshot
Transcriptome analysis of the Taxodium ‘Zhongshanshan 405’ roots in response to salinity stress
inferredcites →https://doi.org/10.1016/j.plaphy.2018.01.019openalex-snapshot
De novo sequencing, assembly, and analysis of Iris lactea var. chinensis roots’ transcriptome in response to salt stress
inferredcites →https://doi.org/10.1016/j.tibtech.2004.11.005openalex-snapshot
Genic microsatellite markers in plants: features and applications
inferredcites →https://doi.org/10.1016/j.tig.2010.01.004openalex-snapshot
On the origin of MADS-domain transcription factors
inferredcites →https://doi.org/10.1016/j.tplants.2003.09.006openalex-snapshot
And then there were many: MADS goes genomic
inferredcites →https://doi.org/10.1016/j.tplants.2004.12.005openalex-snapshot
bHLH class transcription factors take centre stage in phytochrome signalling
inferredcites →https://doi.org/10.1016/j.tplants.2004.12.011openalex-snapshot
MYB–bHLH–WD40 protein complex and the evolution of cellular diversity
inferredcites →https://doi.org/10.1016/j.tplants.2010.06.005openalex-snapshot
MYB transcription factors in Arabidopsis
inferredcites →https://doi.org/10.1016/s0022-2836(05)80360-2openalex-snapshot
Basic Local Alignment Search Tool
inferredcites →https://doi.org/10.1016/s1055-7903(03)00207-0openalex-snapshot
The major clades of MADS-box genes and their role in the development and evolution of flowering plants
inferredcites →https://doi.org/10.1016/s1369-5266(00)00199-0openalex-snapshot
The R2R3-MYB gene family in Arabidopsis thaliana
inferredcites →https://doi.org/10.1038/35054083openalex-snapshot
Complexes of MADS-box proteins are sufficient to convert leaves into floral organs
inferredcites →https://doi.org/10.1038/353031a0openalex-snapshot
The war of the whorls: genetic interactions controlling flower development
inferredcites →https://doi.org/10.1038/nbt.1883openalex-snapshot
Full-length transcriptome assembly from RNA-Seq data without a reference genome
inferredcites →https://doi.org/10.1038/srep11037openalex-snapshot
The Evolutionary History of R2R3-MYB Proteins Across 50 Eukaryotes: New Insights Into Subfamily Classification and Expansion
inferredcites →https://doi.org/10.1046/j.0962-1083.2001.01417.xopenalex-snapshot
Patterns of genetic and phenotypic variation in Iris haynei and I. atrofusca ( Iris sect. Oncocyclus = the royal irises) along an ecogeographical gradient in Israel and the West Bank
inferredcites →https://doi.org/10.1055/s-2005-837709openalex-snapshot
Pollination of Oncocyclus irises (Iris: Iridaceae) by Night‐Sheltering Male Bees
inferredcites →https://doi.org/10.1078/1617-1381-00041openalex-snapshot
Constructing Red Numbers for setting conservation priorities of endangered plant species: Israeli flora as a test case
inferredcites →https://doi.org/10.1086/337130openalex-snapshot
Genetic Affinities among the Oncocyclus irises
inferredcites →https://doi.org/10.1086/346160openalex-snapshot
Phylogenetic Relationships of the Siberian Iris Species Inferred from Noncoding Chloroplast DNA Sequences
inferredcites →https://doi.org/10.1093/acprof:oso/9780199661596.001.0001openalex-snapshot
Understanding Flowers and Flowering, Second Edition
inferredcites →https://doi.org/10.1093/aob/mcs292openalex-snapshot
The endangered Iris atropurpurea (Iridaceae) in Israel: honey-bees, night-sheltering male bees and female solitary bees as pollinators
inferredcites →https://doi.org/10.1093/aob/mcw139openalex-snapshot
Reproductive isolation between populations ofIris atropurpureais associated with ecological differentiation
inferredcites →https://doi.org/10.1093/bioinformatics/8.3.275openalex-snapshot
The rapid generation of mutation data matrices from protein sequences
inferredcites →https://doi.org/10.1093/bioinformatics/btp348openalex-snapshot
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
inferredcites →https://doi.org/10.1093/bioinformatics/btt086openalex-snapshot
QUAST: quality assessment tool for genome assemblies
inferredcites →https://doi.org/10.1093/genetics/164.2.685openalex-snapshot
Characterization of High-Copy-Number Retrotransposons From the Large Genomes of the Louisiana Iris Species and Their Use as Molecular Markers
inferredcites →https://doi.org/10.1093/jxb/ers233openalex-snapshot
MADS-box Genes and Floral Development: the Dark Side
inferredcites →https://doi.org/10.1093/molbev/msy096openalex-snapshot
MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms
inferredcites →https://doi.org/10.1093/nar/22.22.4673openalex-snapshot
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
inferredcites →https://doi.org/10.1093/nar/gkl252openalex-snapshot
Virtual Ribosome--a comprehensive DNA translation tool with support for integration of sequence feature annotation
inferredcites →https://doi.org/10.1093/nar/gkz1020openalex-snapshot
PlantRegMap: charting functional regulatory maps in plants
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a004137openalex-snapshot
Two Ancient Classes of MIKC-type MADS-box Genes are Present in the Moss Physcomitrella patens
inferredcites →https://doi.org/10.1093/pcp/pct085openalex-snapshot
Novel Insights Into the Function of Arabidopsis R2R3-MYB Transcription Factors Regulating Aliphatic Glucosinolate Biosynthesis
inferredcites →https://doi.org/10.1098/rstb.2012.0003openalex-snapshot
Diversity, classification and function of the plant protein kinase superfamily
inferredcites →https://doi.org/10.1101/gad.6.5.864openalex-snapshot
Functional analysis of the transcriptional activator encoded by the maize B gene: evidence for a direct functional interaction between two classes of regulatory proteins.
inferredcites →https://doi.org/10.1104/pp.107.104521openalex-snapshot
Participation of the Arabidopsis bHLH Factor GL3 in Trichome Initiation Regulatory Events
inferredcites →https://doi.org/10.1104/pp.107.108647openalex-snapshot
An AGAMOUS -Related MADS-Box Gene, XAL1 ( AGL12 ), Regulates Root Meristem Cell Proliferation and Flowering Transition in Arabidopsis
inferredcites →https://doi.org/10.1104/pp.108.132795openalex-snapshot
Expansion and Diversification of thePopulusR2R3-MYB Family of Transcription Factors
inferredcites →https://doi.org/10.1105/tpc.011544openalex-snapshot
Molecular and Phylogenetic Analyses of the Complete MADS-Box Transcription Factor Family in Arabidopsis
inferredcites →https://doi.org/10.1105/tpc.104.022236openalex-snapshot
Genome-Wide Analysis of Arabidopsis Pentatricopeptide Repeat Proteins Reveals Their Essential Role in Organelle Biogenesis[W]
inferredcites →https://doi.org/10.1111/j.1095-8312.2009.01265.xopenalex-snapshot
Local adaptation in four Iris species tested in a common-garden experiment
inferredcites →https://doi.org/10.1111/j.1365-313x.2004.02183.xopenalex-snapshot
Comprehensive identification of Arabidopsis thaliana MYB transcription factors interacting with R/B‐like BHLH proteins
inferredcites →https://doi.org/10.1111/nph.12982openalex-snapshot
Are pollinators the agents of selection for the extreme large size and dark color in O ncocyclus irises?
inferredcites →https://doi.org/10.1111/nph.13191openalex-snapshot
The Chromosome Counts Database ( CCDB ) – a community resource of plant chromosome numbers
inferredcites →https://doi.org/10.1126/science.250.4983.931openalex-snapshot
Genetic Control of Flower Development by Homeotic Genes in Antirrhinum majus
inferredcites →https://doi.org/10.1126/science.279.5349.407openalex-snapshot
An Arabidopsis MADS Box Gene That Controls Nutrient-Induced Changes in Root Architecture
inferredcites →https://doi.org/10.1134/s0006297909010015openalex-snapshot
Biochemical and molecular characterization of plant MYB transcription factor family
inferredcites →https://doi.org/10.1146/annurev-arplant-050213-040159openalex-snapshot
Pentatricopeptide Repeat Proteins in Plants
inferredcites →https://doi.org/10.1186/1471-2105-12-323openalex-snapshot
RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome
inferredcites →https://doi.org/10.1186/1471-2164-10-219openalex-snapshot
Sequencing and de novo analysis of a coral larval transcriptome using 454 GSFlx
inferredcites →https://doi.org/10.1186/1471-2164-13-192openalex-snapshot
De novo assembly and characterization of bark transcriptome using Illumina sequencing and development of EST-SSR markers in rubber tree (Hevea brasiliensis Muell. Arg.)
inferredcites →https://doi.org/10.1186/1471-2164-13-90openalex-snapshot
De novo assembly and Characterisation of the Transcriptome during seed development, and generation of genic-SSR markers in Peanut (Arachis hypogaea L.)
inferredcites →https://doi.org/10.1186/1471-2164-8-242openalex-snapshot
MADS-box gene family in rice: genome-wide identification, organization and expression profiling during reproductive development and stress
inferredcites →https://doi.org/10.1186/1471-2229-10-45openalex-snapshot
The first set of EST resource for gene discovery and marker development in pigeonpea (Cajanus cajanL.)
inferredcites →https://doi.org/10.1186/1471-2229-9-72openalex-snapshot
EST and EST-SSR marker resources for Iris
inferredcites →https://doi.org/10.1186/gb-2010-11-6-214openalex-snapshot
A hitchhiker's guide to the MADS world of plants
inferredcites →https://doi.org/10.1186/s12864-015-1212-2openalex-snapshot
Integrated transcriptome catalogue and organ-specific profiling of gene expression in fertile garlic (Allium sativum L.)
inferredcites →https://doi.org/10.1242/dev.016873openalex-snapshot
The TTG1-bHLH-MYB complex controls trichome cell fate and patterning through direct targeting of regulatory loci
inferredcites →https://doi.org/10.12705/651.3openalex-snapshot
The royal irises ( Iris subg. Iris sect. Oncocyclus ): Plastid and low‐copy nuclea data contribute to an understanding of their phylogenetic relationships
inferredcites →https://doi.org/10.1560/djxh-qx0m-5p0h-dlmwopenalex-snapshot
Species concepts and ecogeographical divergence of Oncocyclus irises
inferredcites →https://doi.org/10.2135/cropsci2005.0346openalex-snapshot
Generation of Expressed Sequence Tags (ESTs) for Gene Discovery and Marker Development in Cultivated Peanut
inferredcites →https://doi.org/10.2307/2419577openalex-snapshot
A Guide to Species Irises: Their Identification and Cultivation.
inferredcites →https://doi.org/10.3390/ijms161226084openalex-snapshot
Transcriptome Profiling of Louisiana iris Root and Identification of Genes Involved in Lead-Stress Response
inferredcites →https://doi.org/10.3732/ajb.1100608openalex-snapshot
Genomic and EST‐derived microsatellite markers for Iris laevigata (Iridaceae) and other congeneric species
inferredcites →https://doi.org/10.4137/ebo.s5861openalex-snapshot
EvoPipes.net: Bioinformatic Tools for Ecological and Evolutionary Genomics
inferredcites →https://doi.org/10.5642/aliso.20143201.03openalex-snapshot
The Complete Plastid Genome Sequence of Iris gatesii (Section Oncocyclus), a Bearded Species from Southeastern Turkey
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