On the public citation graph

Microarray Gene Expression Dataset Re-Analysis Reveals Variability in Influenza Infection and Vaccination

https://doi.org/10.1101/702068

0 signed · 68 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

Is this your work? Sign in with ORCID and put your name on the claims that are yours.

Claim with ORCID

Reference health. See whether every reference in this work resolves to a known work and none has been retracted — and get a dated CiteStamped badge you can embed.

See reference health

What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/cpbi.5openalex-snapshot

The GeneCards Suite: From Gene Data Mining to Disease Genome Sequence Analyses

inferredcites →https://doi.org/10.1007/978-3-319-72377-8openalex-snapshot

Mathematica for Bioinformatics: A Wolfram Language Approach to Omics

inferredcites →https://doi.org/10.1007/978-3-319-72377-8_4openalex-snapshot

Databases: E-Utilities and UCSC Genome Browser

inferredcites →https://doi.org/10.1007/s13365-013-0231-5openalex-snapshot

Gene expression analysis in children with complex seizures due to influenza A(H1N1)pdm09 or rotavirus gastroenteritis

inferredcites →https://doi.org/10.1016/j.cell.2014.03.031openalex-snapshot

Global Analyses of Human Immune Variation Reveal Baseline Predictors of Postvaccination Responses

inferredcites →https://doi.org/10.1016/j.coi.2011.07.016openalex-snapshot

The pathogenesis of influenza virus infections: the contributions of virus and host factors

inferredcites →https://doi.org/10.1016/j.coviro.2015.01.007openalex-snapshot

Functions of the influenza A virus NS1 protein in antiviral defense

inferredcites →https://doi.org/10.1016/j.ejpb.2015.05.023openalex-snapshot

Current and next generation influenza vaccines: Formulation and production strategies

inferredcites →https://doi.org/10.1016/j.immuni.2011.05.003openalex-snapshot

Immune Signaling by RIG-I-like Receptors

inferredcites →https://doi.org/10.1016/j.immuni.2012.12.008openalex-snapshot

Systems Scale Interactive Exploration Reveals Quantitative and Qualitative Differences in Response to Influenza and Pneumococcal Vaccines

inferredcites →https://doi.org/10.1016/j.immuni.2015.11.012openalex-snapshot

Systems Analysis of Immunity to Influenza Vaccination across Multiple Years and in Diverse Populations Reveals Shared Molecular Signatures

inferredcites →https://doi.org/10.1016/j.jinf.2011.07.004openalex-snapshot

Excessive innate immune response and mutant D222G/N in severe A (H1N1) pandemic influenza

inferredcites →https://doi.org/10.1016/j.yhbeh.2010.12.002openalex-snapshot

Sex differences in the response to influenza virus infection: Modulation by stress

inferredcites →https://doi.org/10.1037/e548312006-001openalex-snapshot

Prevention and Control of Influenza: Recommendations of the Advisory Committee on Immunization Practices (ACIP)

inferredcites →https://doi.org/10.1038/msb.2013.15openalex-snapshot

Apoptosis and other immune biomarkers predict influenza vaccine responsiveness

inferredcites →https://doi.org/10.1038/nbt.2777openalex-snapshot

Computational resources for high-dimensional immune analysis from the Human Immunology Project Consortium

inferredcites →https://doi.org/10.1038/ni.2067openalex-snapshot

Systems biology of vaccination for seasonal influenza in humans

inferredcites →https://doi.org/10.1038/s41590-018-0111-5openalex-snapshot

Progression of whole-blood transcriptional signatures from interferon-induced to neutrophil-associated patterns in severe influenza

inferredcites →https://doi.org/10.1038/s41598-018-31999-xopenalex-snapshot

Sex-specific patterns of gene expression following influenza vaccination

inferredcites →https://doi.org/10.1038/sdata.2018.15openalex-snapshot

ImmPort, toward repurposing of open access immunological assay data for translational and clinical research

inferredcites →https://doi.org/10.1038/srep37237openalex-snapshot

MathIOmica: An Integrative Platform for Dynamic Omics

inferredcites →https://doi.org/10.1039/c5mb00663eopenalex-snapshot

ReactomePA: an R/Bioconductor package for reactome pathway analysis and visualization

inferredcites →https://doi.org/10.1056/nejmp1714916openalex-snapshot

Chasing Seasonal Influenza — The Need for a Universal Influenza Vaccine

inferredcites →https://doi.org/10.1080/21645515.2017.1338547openalex-snapshot

Factors affecting immune responses to the influenza vaccine

inferredcites →https://doi.org/10.1084/jem.20142318openalex-snapshot

The transcription factor Bcl11b is specifically expressed in group 2 innate lymphoid cells and is essential for their development

inferredcites →https://doi.org/10.1089/cmb.2017.0025openalex-snapshot

Evolution and Vaccination of Influenza Virus

inferredcites →https://doi.org/10.1093/bioinformatics/btg405openalex-snapshot

affy—analysis of Affymetrix GeneChip data at the probe level

inferredcites →https://doi.org/10.1093/bioinformatics/bti551openalex-snapshot

BiNGO: a Cytoscape plugin to assess overrepresentation of Gene Ontology categories in Biological Networks

inferredcites →https://doi.org/10.1093/bioinformatics/btq431openalex-snapshot

A framework for oligonucleotide microarray preprocessing

inferredcites →https://doi.org/10.1093/infdis/jiq156openalex-snapshot

Early Patterns of Gene Expression Correlate With the Humoral Immune Response to Influenza Vaccination in Humans

inferredcites →https://doi.org/10.1093/infdis/jiu079openalex-snapshot

Differences in Antibody Responses Between Trivalent Inactivated Influenza Vaccine and Live Attenuated Influenza Vaccine Correlate With the Kinetics and Magnitude of Interferon Signaling in Children

inferredcites →https://doi.org/10.1093/infdis/jix632openalex-snapshot

Duration of Influenza Vaccine Effectiveness: A Systematic Review, Meta-analysis, and Meta-regression of Test-Negative Design Case-Control Studies

inferredcites →https://doi.org/10.1093/nar/27.1.29openalex-snapshot

KEGG: Kyoto Encyclopedia of Genes and Genomes

inferredcites →https://doi.org/10.1093/nar/28.1.27openalex-snapshot

KEGG: Kyoto Encyclopedia of Genes and Genomes

inferredcites →https://doi.org/10.1093/nar/30.1.207openalex-snapshot

Gene Expression Omnibus: NCBI gene expression and hybridization array data repository

inferredcites →https://doi.org/10.1093/nar/gkg091openalex-snapshot

ArrayExpress--a public repository for microarray gene expression data at the EBI

inferredcites →https://doi.org/10.1093/nar/gki056openalex-snapshot

ArrayExpress--a public repository for microarray gene expression data at the EBI

inferredcites →https://doi.org/10.1093/nar/gkv007openalex-snapshot

limma powers differential expression analyses for RNA-sequencing and microarray studies

inferredcites →https://doi.org/10.1093/nar/gkv1070openalex-snapshot

KEGG as a reference resource for gene and protein annotation

inferredcites →https://doi.org/10.1093/nar/gkw1092openalex-snapshot

KEGG: new perspectives on genomes, pathways, diseases and drugs

inferredcites →https://doi.org/10.1101/gr.1239303openalex-snapshot

Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks

inferredcites →https://doi.org/10.1111/j.1365-2567.2007.02617.xopenalex-snapshot

CD40‐mediated enhancement of immune responses against three forms of influenza vaccine

inferredcites →https://doi.org/10.1128/cvi.00414-16openalex-snapshot

Comparisons of the Humoral and Cellular Immune Responses Induced by Live Attenuated Influenza Vaccine and Inactivated Influenza Vaccine in Adults

inferredcites →https://doi.org/10.1128/jvi.00789-12openalex-snapshot

HMGB1 Protein Binds to Influenza Virus Nucleoprotein and Promotes Viral Replication

inferredcites →https://doi.org/10.1128/jvi.00909-08openalex-snapshot

NF-κB Signaling Differentially Regulates Influenza Virus RNA Synthesis

inferredcites →https://doi.org/10.1128/jvi.06757-11openalex-snapshot

Plasticity and Virus Specificity of the Airway Epithelial Cell Immune Response during Respiratory Virus Infection

inferredcites →https://doi.org/10.1146/annurev.pathmechdis.3.121806.154316openalex-snapshot

The Pathology of Influenza Virus Infections

inferredcites →https://doi.org/10.1155/2013/495848openalex-snapshot

IL-1βand IL-6 Upregulation in Children with H1N1 Influenza Virus Infection

inferredcites →https://doi.org/10.1155/2019/8512363openalex-snapshot

Poly-ADP Ribosyl Polymerase 1 (PARP1) Regulates Influenza A Virus Polymerase

inferredcites →https://doi.org/10.1186/s12916-018-1239-8openalex-snapshot

The impact of repeated vaccination on influenza vaccine effectiveness: a systematic review and meta-analysis

inferredcites →https://doi.org/10.1186/s12967-017-1252-2openalex-snapshot

Impaired B cell immunity in acute myeloid leukemia patients after chemotherapy

inferredcites →https://doi.org/10.12688/f1000research.14140.1openalex-snapshot

Using electronic biology based platform to predict flu vaccine efficacy for 2018/2019

inferredcites →https://doi.org/10.1371/journal.pmed.1001549openalex-snapshot

Whole Blood Gene Expression Profiles to Assess Pathogenesis and Disease Severity in Infants with Respiratory Syncytial Virus Infection

inferredcites →https://doi.org/10.1371/journal.ppat.1004869openalex-snapshot

Host Transcriptional Response to Influenza and Other Acute Respiratory Viral Infections – A Prospective Cohort Study

inferredcites →https://doi.org/10.1378/chest.12-1711openalex-snapshot

Immunobiology of Influenza Vaccines

inferredcites →https://doi.org/10.1515/bc.2008.148openalex-snapshot

Influenza viruses and the NF-κB signaling pathway – towards a novel concept of antiviral therapy

inferredcites →https://doi.org/10.15585/mmwr.rr6703a1openalex-snapshot

Prevention and Control of Seasonal Influenza with Vaccines: Recommendations of the Advisory Committee on Immunization Practices—United States, 2018–19 Influenza Season

inferredcites →https://doi.org/10.18632/aging.100720openalex-snapshot

Aging-dependent alterations in gene expression and a mitochondrial signature of responsiveness to human influenza vaccination

inferredcites →https://doi.org/10.2307/2348250openalex-snapshot

The Box-Cox Transformation Technique: A Review

inferredcites →https://doi.org/10.3389/fimmu.2018.01366openalex-snapshot

Streptococcus pneumoniae’s Virulence and Host Immunity: Aging, Diagnostics, and Prevention

inferredcites →https://doi.org/10.3389/fimmu.2018.02465openalex-snapshot

Influenza Vaccine-Induced Antibody Responses Are Not Impaired by Frailty in the Community-Dwelling Elderly With Natural Influenza Exposure

inferredcites →https://doi.org/10.3389/fmicb.2016.01841openalex-snapshot

Immune Responses to Influenza Virus and Its Correlation to Age and Inherited Factors

inferredcites →https://doi.org/10.3389/fnins.2019.00392openalex-snapshot

Data-Driven Analysis of Age, Sex, and Tissue Effects on Gene Expression Variability in Alzheimer's Disease

inferredcites →https://doi.org/10.3390/v8040102openalex-snapshot

Shutoff of Host Gene Expression in Influenza A Virus and Herpesviruses: Similar Mechanisms and Common Themes

inferredcites →https://doi.org/10.4049/jimmunol.1300093openalex-snapshot

CD40 Ligand Preferentially Modulates Immune Response and Enhances Protection against Influenza Virus

inferredcites →https://doi.org/10.4049/jimmunol.190.supp.43.9openalex-snapshot

CD177 participates in a novel mechanism for regulating neutrophil recruitment (P3093)

inferredcites →https://doi.org/10.7554/elife.00299openalex-snapshot

Integrative genomic analysis of the human immune response to influenza vaccination

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1016/j.compbiolchem.2026.109147openalex-snapshot

Predicting respiratory infection and symptoms development using gene set enrichment scores and machine learning

Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.