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Warm nights disrupt global transcriptional rhythms in field-grown rice panicles

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/9781118308240.ch6openalex-snapshot
Temperature and the circadian clock
inferredcites →https://doi.org/10.1002/j.1537-2197.1944.tb12172.xopenalex-snapshot
PLANT GROWTH UNDER CONTROLLED CONDITIONS. III. CORRELATION BETWEEN VARIOUS PHYSIOLOGICAL PROCESSES AND GROWTH IN THE TOMATO PLANT
inferredcites →https://doi.org/10.1002/j.1537-2197.1956.tb10469.xopenalex-snapshot
INJURY OF TOMATO PLANTS BY CONTINUOUS LIGHT AND UNFAVORABLE PHOTOPERIODIC CYCLES
inferredcites →https://doi.org/10.1002/joc.4688openalex-snapshot
Diurnal asymmetry to the observed global warming
inferredcites →https://doi.org/10.1007/s00299-011-1074-2openalex-snapshot
Different effects of night versus day high temperature on rice quality and accumulation profiling of rice grain proteins during grain filling
inferredcites →https://doi.org/10.1007/s00425-012-1647-5openalex-snapshot
Damage to photosystem II due to heat stress without light-driven electron flow: involvement of enhanced introduction of reducing power into thylakoid membranes
inferredcites →https://doi.org/10.1007/s11099-015-0115-4openalex-snapshot
Daily temperature drop prevents inhibition of photosynthesis in tomato plants under continuous light
inferredcites →https://doi.org/10.1007/s11103-019-00873-3openalex-snapshot
Novel transcriptional responses to heat revealed by turning up the heat at night
inferredcites →https://doi.org/10.1016/j.agee.2010.05.012openalex-snapshot
Local climate affects growth, yield and grain quality of aromatic and non-aromatic rice in northwestern India
inferredcites →https://doi.org/10.1016/j.agee.2013.11.024openalex-snapshot
Seasonal assessment of greenhouse gas emissions from irrigated lowland rice fields under infrared warming
inferredcites →https://doi.org/10.1016/j.agrformet.2008.07.006openalex-snapshot
Interactions of elevated [CO2] and night temperature on rice growth and yield
inferredcites →https://doi.org/10.1016/j.cell.2012.10.048openalex-snapshot
Deciphering and Prediction of Transcriptome Dynamics under Fluctuating Field Conditions
inferredcites →https://doi.org/10.1016/j.cell.2012.11.031openalex-snapshot
Modeling Transcriptome Dynamics in a Complex World
inferredcites →https://doi.org/10.1016/j.cub.2009.01.046openalex-snapshot
High Temperature-Mediated Adaptations in Plant Architecture Require the bHLH Transcription Factor PIF4
inferredcites →https://doi.org/10.1016/j.eja.2009.11.006openalex-snapshot
Effects of high night temperature and spikelet position on yield-related parameters of rice (Oryza sativa L.) plants
inferredcites →https://doi.org/10.1016/j.eja.2013.03.006openalex-snapshot
Predicting temperature induced sterility of rice spikelets requires simulation of crop-generated microclimate
inferredcites →https://doi.org/10.1016/j.envexpbot.2010.01.006openalex-snapshot
Effect of high night temperatures on cotton respiration, ATP levels and carbohydrate content
inferredcites →https://doi.org/10.1016/j.envexpbot.2014.10.007openalex-snapshot
Temperature regulation of plant phenological development
inferredcites →https://doi.org/10.1016/j.envexpbot.2016.04.007openalex-snapshot
Diurnal temperature amplitude alters physiological and growth response of maize (Zea mays L.) during the vegetative stage
inferredcites →https://doi.org/10.1016/j.fcr.2011.03.012openalex-snapshot
Impact of field-scale nighttime air temperatures during kernel development on rice milling quality
inferredcites →https://doi.org/10.1016/j.fcr.2011.06.012openalex-snapshot
Extreme nighttime air temperatures in 2010 impact rice chalkiness and milling quality
inferredcites →https://doi.org/10.1016/j.fcr.2013.12.014openalex-snapshot
Rice grain yield and component responses to near 2°C of warming
inferredcites →https://doi.org/10.1016/j.fcr.2014.11.004openalex-snapshot
Increase in night temperature in rice enhances respiration rate without significant impact on biomass accumulation
inferredcites →https://doi.org/10.1016/j.fcr.2015.10.006openalex-snapshot
Grain yield and quality responses of tropical hybrid rice to high night-time temperature
inferredcites →https://doi.org/10.1016/j.fcr.2017.02.018openalex-snapshot
Elevated CO2 and heat stress interactions affect grain yield, quality and mineral nutrient composition in rice under field conditions
inferredcites →https://doi.org/10.1016/j.fcr.2018.09.009openalex-snapshot
Combined drought and heat stress impact during flowering and grain filling in contrasting rice cultivars grown under field conditions
inferredcites →https://doi.org/10.1016/j.molcel.2010.05.004openalex-snapshot
Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities
inferredcites →https://doi.org/10.1016/j.molp.2017.07.002openalex-snapshot
Expanding Roles of PIFs in Signal Integration from Multiple Processes
inferredcites →https://doi.org/10.1016/j.pbi.2015.01.004openalex-snapshot
Transcriptional networks—crops, clocks, and abiotic stress
inferredcites →https://doi.org/10.1016/j.scienta.2014.03.014openalex-snapshot
Leaf photosynthesis, plant growth, and carbohydrate accumulation of tomato under different photoperiods and diurnal temperature differences
inferredcites →https://doi.org/10.1016/j.tplants.2010.12.003openalex-snapshot
Starch and the clock: the dark side of plant productivity
inferredcites →https://doi.org/10.1016/j.tplants.2011.02.003openalex-snapshot
Plants under continuous light
inferredcites →https://doi.org/10.1016/j.tplants.2014.01.010openalex-snapshot
The BBX family of plant transcription factors
inferredcites →https://doi.org/10.1016/j.tplants.2015.01.001openalex-snapshot
STRESSing the role of the plant circadian clock
inferredcites →https://doi.org/10.1029/2005gl024379openalex-snapshot
Maximum and minimum temperature trends for the globe: An update through 2004
inferredcites →https://doi.org/10.1038/nature10182openalex-snapshot
The ELF4–ELF3–LUX complex links the circadian clock to diurnal control of hypocotyl growth
inferredcites →https://doi.org/10.1038/nature11704openalex-snapshot
Circadian topology of metabolism
inferredcites →https://doi.org/10.1038/ncb2545openalex-snapshot
Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses
inferredcites →https://doi.org/10.1038/ncomms13692openalex-snapshot
TOC1–PIF4 interaction mediates the circadian gating of thermoresponsive growth in Arabidopsis
inferredcites →https://doi.org/10.1038/ncomms7202openalex-snapshot
The transcriptional regulator BBX24 impairs DELLA activity to promote shade avoidance in Arabidopsis thaliana
inferredcites →https://doi.org/10.1038/nplants.2017.87openalex-snapshot
The evening complex coordinates environmental and endogenous signals in Arabidopsis
inferredcites →https://doi.org/10.1038/s41467-018-07885-5openalex-snapshot
Selective single molecule sequencing and assembly of a human Y chromosome of African origin
inferredcites →https://doi.org/10.1038/s41467-018-08059-zopenalex-snapshot
Daytime temperature is sensed by phytochrome B in Arabidopsis through a transcriptional activator HEMERA
inferredcites →https://doi.org/10.1038/s41467-019-08398-5openalex-snapshot
Continuous dynamic adjustment of the plant circadian oscillator
inferredcites →https://doi.org/10.1038/s41598-017-17143-1openalex-snapshot
Improving Gene Regulatory Network Inference by Incorporating Rates of Transcriptional Changes
inferredcites →https://doi.org/10.1046/j.1365-3040.2002.00947.xopenalex-snapshot
The relative impacts of daytime and night‐time warming on photosynthetic capacity inPopulus deltoides
inferredcites →https://doi.org/10.1071/fp11035openalex-snapshot
High night temperature decreases leaf photosynthesis and pollen function in grain sorghum
inferredcites →https://doi.org/10.1071/fp14104openalex-snapshot
High night temperature induces contrasting responses for spikelet fertility, spikelet tissue temperature, flowering characteristics and grain quality in rice
inferredcites →https://doi.org/10.1073/pnas.0403720101openalex-snapshot
Rice yields decline with higher night temperature from global warming
inferredcites →https://doi.org/10.1073/pnas.0914299107openalex-snapshot
Circadian control of carbohydrate availability for growth in Arabidopsis plants at night
inferredcites →https://doi.org/10.1073/pnas.1001222107openalex-snapshot
Rice yields in tropical/subtropical Asia exhibit large but opposing sensitivities to minimum and maximum temperatures
inferredcites →https://doi.org/10.1073/pnas.1103741108openalex-snapshot
CIRCADIAN CLOCK-ASSOCIATED 1 and LATE ELONGATED HYPOCOTYL regulate expression of the C-REPEAT BINDING FACTOR (CBF) pathway in Arabidopsis
inferredcites →https://doi.org/10.1073/pnas.1131995100openalex-snapshot
Two Arabidopsis circadian oscillators can be distinguished by differential temperature sensitivity
inferredcites →https://doi.org/10.1073/pnas.1209148109openalex-snapshot
CIRCADIAN CLOCK-ASSOCIATED 1 regulates ROS homeostasis and oxidative stress responses
inferredcites →https://doi.org/10.1073/pnas.1513609112openalex-snapshot
Genome-wide identification of CCA1 targets uncovers an expanded clock network in Arabidopsis
inferredcites →https://doi.org/10.1073/pnas.1601309113openalex-snapshot
Photoreceptor effects on plant biomass, resource allocation, and metabolic state
inferredcites →https://doi.org/10.1073/pnas.1611012113openalex-snapshot
Extensive sequence divergence between the reference genomes of two elite indica rice varieties Zhenshan 97 and Minghui 63
inferredcites →https://doi.org/10.1073/pnas.1701762114openalex-snapshot
Temperature increase reduces global yields of major crops in four independent estimates
inferredcites →https://doi.org/10.1073/pnas.95.12.7197openalex-snapshot
High temperature promotes auxin-mediated hypocotyl elongation in Arabidopsis
inferredcites →https://doi.org/10.1080/15592324.2014.1000164openalex-snapshot
The regulation of UV-B responses by the circadian clock
inferredcites →https://doi.org/10.1080/15592324.2014.1000167openalex-snapshot
Next-generation sequencing as a tool to quickly identify causative EMS-generated mutations
inferredcites →https://doi.org/10.1093/aob/mch122openalex-snapshot
Night Temperature has a Minimal Effect on Respiration and Growth in Rapidly Growing Plants
inferredcites →https://doi.org/10.1093/bioinformatics/btp616openalex-snapshot
edgeR : a Bioconductor package for differential expression analysis of digital gene expression data
inferredcites →https://doi.org/10.1093/database/bat027openalex-snapshot
RiceSRTFDB: A database of rice transcription factors containing comprehensive expression, cis-regulatory element and mutant information to facilitate gene function analysis
inferredcites →https://doi.org/10.1093/jxb/16.3.373openalex-snapshot
Growth and Development in the Young Tomato
inferredcites →https://doi.org/10.1093/jxb/eru339openalex-snapshot
Light and the circadian clock mediate time-specific changes in sensitivity to UV-B stress under light/dark cycles
inferredcites →https://doi.org/10.1093/jxb/eru474openalex-snapshot
qEMF3, a novel QTL for the early-morning flowering trait from wild rice, Oryza officinalis, to mitigate heat stress damage at flowering in rice, O. sativa
inferredcites →https://doi.org/10.1093/jxb/erv193openalex-snapshot
Effect of carbohydrates and night temperature on night respiration in rice
inferredcites →https://doi.org/10.1093/jxb/erv352openalex-snapshot
High night temperature strongly impacts TCA cycle, amino acid and polyamine biosynthetic pathways in rice in a sensitivity-dependent manner
inferredcites →https://doi.org/10.1093/pcp/pcu030openalex-snapshot
Ambient Temperature Signal Feeds into the Circadian Clock Transcriptional Circuitry Through the EC Night-Time Repressor in Arabidopsis thaliana
inferredcites →https://doi.org/10.1094/cc-82-0645openalex-snapshot
Rice Milling Quality, Grain Dimensions, and Starch Branching as Affected by High Night Temperatures
inferredcites →https://doi.org/10.1094/cchem-85-3-0276openalex-snapshot
Effects of Nighttime Temperature During Kernel Development on Rice Physicochemical Properties
inferredcites →https://doi.org/10.1101/093807openalex-snapshot
Improving Gene Regulatory Network Inference by Incorporating Rates of Transcriptional Changes
inferredcites →https://doi.org/10.1101/gr.1239303openalex-snapshot
Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks
inferredcites →https://doi.org/10.1101/sqb.2007.72.006openalex-snapshot
The Diurnal Project: Diurnal and Circadian Expression Profiling, Model-based Pattern Matching, and Promoter Analysis
inferredcites →https://doi.org/10.1104/pp.104.058354openalex-snapshot
Low Temperature Induction of Arabidopsis CBF1 , 2 , and 3 Is Gated by the Circadian Clock
inferredcites →https://doi.org/10.1104/pp.105.061903openalex-snapshot
Daylength and Circadian Effects on Starch Degradation and Maltose Metabolism
inferredcites →https://doi.org/10.1104/pp.17.00057openalex-snapshot
Correlations between Circadian Rhythms and Growth in Challenging Environments
inferredcites →https://doi.org/10.1104/pp.81.4.1075openalex-snapshot
Carbohydrate Level and Growth of Tomato Plants
inferredcites →https://doi.org/10.1105/tpc.104.029504openalex-snapshot
PSEUDO-RESPONSE REGULATOR 7 and 9 Are Partially Redundant Genes Essential for the Temperature Responsiveness of the Arabidopsis Circadian Clock
inferredcites →https://doi.org/10.1105/tpc.106.040980openalex-snapshot
Plant Circadian Rhythms
inferredcites →https://doi.org/10.1105/tpc.113.114306openalex-snapshot
Heat Shock–Induced Fluctuations in Clock and Light Signaling Enhance Phytochrome B–Mediated Arabidopsis Deetiolation
inferredcites →https://doi.org/10.1105/tpc.114.135582openalex-snapshot
Punctual Transcriptional Regulation by the Rice Circadian Clock under Fluctuating Field Conditions
inferredcites →https://doi.org/10.1105/tpc.13.6.1293openalex-snapshot
ELF3 Encodes a Circadian Clock-Regulated Nuclear Protein That Functions in an Arabidopsis PHYB Signal Transduction Pathway
inferredcites →https://doi.org/10.1105/tpc.16.00158openalex-snapshot
EGRINs (Environmental Gene Regulatory Influence Networks) in Rice That Function in the Response to Water Deficit, High Temperature, and Agricultural Environments
inferredcites →https://doi.org/10.1111/j.1365-294x.2010.04962.xopenalex-snapshot
Circadian clocks and adaptation in Arabidopsis
inferredcites →https://doi.org/10.1111/j.1365-313x.2004.02016.xopenalex-snapshot
mapman : a user‐driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes
inferredcites →https://doi.org/10.1111/j.1461-0248.2009.01343.xopenalex-snapshot
Evidence for the adaptive significance of circadian rhythms
inferredcites →https://doi.org/10.1111/j.1747-0765.2008.00343.xopenalex-snapshot
High night temperature stimulates photosynthesis, biomass production and growth during the vegetative stage of rice plants
inferredcites →https://doi.org/10.1111/nph.12088openalex-snapshot
Source–sink dynamics and proteomic reprogramming under elevated night temperature and their impact on rice yield and grain quality
inferredcites →https://doi.org/10.1111/pce.12430openalex-snapshot
Rice responses to rising temperatures – challenges, perspectives and future directions
inferredcites →https://doi.org/10.1111/pce.13488openalex-snapshot
Carbon balance and source‐sink metabolic changes in winter wheat exposed to high night‐time temperature
inferredcites →https://doi.org/10.1111/ppl.12485openalex-snapshot
Post‐flowering night respiration and altered sink activity account for high night temperature‐induced grain yield and quality loss in rice (Oryza sativaL.)
inferredcites →https://doi.org/10.1111/tpj.13050openalex-snapshot
Jasmonate signalling drives time‐of‐day differences in susceptibility of Arabidopsis to the fungal pathogen Botrytis cinerea
inferredcites →https://doi.org/10.1126/science.1115581openalex-snapshot
Plant Circadian Clocks Increase Photosynthesis, Growth, Survival, and Competitive Advantage
inferredcites →https://doi.org/10.1126/science.98.2542.265openalex-snapshot
The Role of Night Temperature in Plant Performance
inferredcites →https://doi.org/10.1126/science.aaf5656openalex-snapshot
Phytochrome B integrates light and temperature signals in Arabidopsis
inferredcites →https://doi.org/10.1126/science.aaf6005openalex-snapshot
Phytochromes function as thermosensors in Arabidopsis
inferredcites →https://doi.org/10.1146/annurev.arplant.043008.092054openalex-snapshot
The Circadian System in Higher Plants
inferredcites →https://doi.org/10.1177/0748730410379711openalex-snapshot
JTK_CYCLE: An Efficient Nonparametric Algorithm for Detecting Rhythmic Components in Genome-Scale Data Sets
inferredcites →https://doi.org/10.1186/1471-2229-5-1openalex-snapshot
Expression of human dopamine receptor in potato (Solanum tuberosum) results in altered tuber carbon metabolism
inferredcites →https://doi.org/10.1186/s12870-015-0566-6openalex-snapshot
Natural variants of ELF3 affect thermomorphogenesis by transcriptionally modulating PIF4-dependent auxin response genes
inferredcites →https://doi.org/10.1186/s13059-015-0866-zopenalex-snapshot
Ancient DNA and the rewriting of human history: be sparing with Occam’s razor
inferredcites →https://doi.org/10.1186/s13059-016-1076-zopenalex-snapshot
The Local Edge Machine: inference of dynamic models of gene regulation
inferredcites →https://doi.org/10.1261/rna.070227.118openalex-snapshot
Analysis of differential gene expression and alternative splicing is significantly influenced by choice of reference genome
inferredcites →https://doi.org/10.1271/bbb.60643openalex-snapshot
Characterization of a Set of Phytochrome-Interacting Factor-Like bHLH Proteins in Oryza sativa
inferredcites →https://doi.org/10.1271/bbb.69.410openalex-snapshot
Circadian-Associated Rice Pseudo Response Regulators (OsPRRs): Insight into the Control of Flowering Time
inferredcites →https://doi.org/10.1271/bbb.70048openalex-snapshot
Characterization of the Rice Circadian Clock-Associated Pseudo-Response Regulators inArabidopsis thaliana
inferredcites →https://doi.org/10.1371/journal.pgen.0040014openalex-snapshot
Network Discovery Pipeline Elucidates Conserved Time-of-Day–Specific cis-Regulatory Modules
inferredcites →https://doi.org/10.1371/journal.pgen.1003281openalex-snapshot
Ehd4 Encodes a Novel and Oryza-Genus-Specific Regulator of Photoperiodic Flowering in Rice
inferredcites →https://doi.org/10.1371/journal.pone.0012776openalex-snapshot
Inferring Regulatory Networks from Expression Data Using Tree-Based Methods
inferredcites →https://doi.org/10.1371/journal.pone.0016907openalex-snapshot
Global Profiling of Rice and Poplar Transcriptomes Highlights Key Conserved Circadian-Controlled Pathways and cis-Regulatory Modules
inferredcites →https://doi.org/10.1371/journal.pone.0056482openalex-snapshot
Acclimation of Foliar Respiration and Photosynthesis in Response to Experimental Warming in a Temperate Steppe in Northern China
inferredcites →https://doi.org/10.1371/journal.pone.0072157openalex-snapshot
Neglecting Rice Milling Yield and Quality Underestimates Economic Losses from High-Temperature Stress
inferredcites →https://doi.org/10.1371/journal.pone.0087544openalex-snapshot
The B-Box Family Gene STO (BBX24) in Arabidopsis thaliana Regulates Flowering Time in Different Pathways
inferredcites →https://doi.org/10.1371/journal.pone.0155497openalex-snapshot
Species Identification in Malaise Trap Samples by DNA Barcoding Based on NGS Technologies and a Scoring Matrix
inferredcites →https://doi.org/10.1371/journal.pone.0161791openalex-snapshot
PIF4 and ELF3 Act Independently in Arabidopsis thaliana Thermoresponsive Flowering
inferredcites →https://doi.org/10.14348/molcells.2016.0126openalex-snapshot
PIF4 Integrates Multiple Environmental and Hormonal Signals for Plant Growth Regulation in Arabidopsis
inferredcites →https://doi.org/10.21273/hortsci.40.2.374openalex-snapshot
Potential Use of a 24-Hour Photoperiod (Continuous Light) with Alternating Air Temperature for Production of Tomato Plug Transplants in a Closed System
inferredcites →https://doi.org/10.2134/agronj1971.00021962006300050046xopenalex-snapshot
Effect of Night Air Temperature on Grain Yield of Corn, Wheat, and Soybeans1
inferredcites →https://doi.org/10.2134/agronj2006.0209openalex-snapshot
Impacts of Day Versus Night Temperatures on Spring Wheat Yields:A Comparison of Empirical and CERES Model Predictions in Three Locations
inferredcites →https://doi.org/10.2135/cropsci2007.12.0717openalex-snapshot
Impact of Nighttime Temperature on Physiology and Growth of Spring Wheat
inferredcites →https://doi.org/10.2135/cropsci2008.03.0161openalex-snapshot
Impact of High Nighttime Temperature on Respiration, Membrane Stability, Antioxidant Capacity, and Yield of Rice Plants
inferredcites →https://doi.org/10.2135/cropsci2009.09.0516openalex-snapshot
Genetic Analysis of Heat Tolerance at Anthesis in Rice
inferredcites →https://doi.org/10.2135/cropsci2012.07.0441openalex-snapshot
High Day‐ or Nighttime Temperature Alters Leaf Assimilation, Reproductive Success, and Phosphatidic Acid of Pollen Grain in Soybean [Glycine max (L.) Merr.]
inferredcites →https://doi.org/10.4141/cjps10038openalex-snapshot
High night temperature and plant growth regulator effects on spikelet sterility, grain characteristics and yield of rice (Oryza sativa L.) plants
inferredcites →https://doi.org/10.4161/psb.28505openalex-snapshot
TheLNK1night light-inducible and clock-regulated gene is induced also in response to warm-night through the circadian clock nighttime repressor inArabidopsis thaliana
inferredcites →https://doi.org/10.4161/psb.28824openalex-snapshot
Specific localization and measurement of hydrogen peroxide inArabidopsis thalianacell suspensions and protoplasts elicited by COS-OGA
inferredcites →https://doi.org/10.4161/psb.6.2.14893openalex-snapshot
Abiotic stress and the plant circadian clock
inferredcites →https://doi.org/10.5772/24537openalex-snapshot
Effects of High Night Temperature on Crop Physiology and Productivity: Plant Growth Regulators Provide a Management Option
inferredcites →https://doi.org/10.7554/elife.13292openalex-snapshot
PCH1 integrates circadian and light-signaling pathways to control photoperiod-responsive growth in Arabidopsis

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1038/s41598-021-85921-zopenalex-snapshot
Genome-wide association study and gene network analyses reveal potential candidate genes for high night temperature tolerance in rice
inferred← citeshttps://doi.org/10.1038/s41598-023-31399-wopenalex-snapshot
Molecular mapping and characterization of QTLs for grain quality traits in a RIL population of US rice under high nighttime temperature stress
inferred← citeshttps://doi.org/10.1111/pce.14012openalex-snapshot
Single cell gene regulatory networks in plants: Opportunities for enhancing climate change stress resilience
inferred← citeshttps://doi.org/10.3389/fgene.2019.01239openalex-snapshot
Circadian Regulation of the Plant Transcriptome Under Natural Conditions
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