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Pervasive introgression of MHC genes in newt hybrid zones

https://doi.org/10.1101/706036
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/evl3.9openalex-snapshot
A genomic footprint of hybrid zone movement in crested newts
inferredcites →https://doi.org/10.1007/s00251-004-0717-7openalex-snapshot
Comparative genomics of major histocompatibility complexes
inferredcites →https://doi.org/10.1016/j.ympev.2017.08.003openalex-snapshot
Isolation and gene flow in a speciation continuum in newts
inferredcites →https://doi.org/10.1017/s0016672300004535openalex-snapshot
The effect of subdivision on variation at multi-allelic loci under balancing selection
inferredcites →https://doi.org/10.1038/hdy.1979.86openalex-snapshot
Gene flow past a cline
inferredcites →https://doi.org/10.1038/nature13408openalex-snapshot
Altitude adaptation in Tibetans caused by introgression of Denisovan-like DNA
inferredcites →https://doi.org/10.1038/ncomms14363openalex-snapshot
Ancient hybridization fuels rapid cichlid fish adaptive radiations
inferredcites →https://doi.org/10.1038/s41467-018-06821-xopenalex-snapshot
The role of MHC supertypes in promoting trans-species polymorphism remains an open question
inferredcites →https://doi.org/10.1046/j.1365-294x.2003.01880.xopenalex-snapshot
Nuclear markers, mitochondrial DNA and male secondary sexual traits variation in a newt hybrid zone (Triturus vulgaris × T. montandoni)
inferredcites →https://doi.org/10.1073/pnas.1708597115openalex-snapshot
Immunogenetic novelty confers a selective advantage in host–pathogen coevolution
inferredcites →https://doi.org/10.1086/650369openalex-snapshot
Speciation Has a Spatial Scale That Depends on Levels of Gene Flow
inferredcites →https://doi.org/10.1093/genetics/149.2.1153openalex-snapshot
The Number of Self-Incompatibility Alleles in a Finite, Subdivided Population
inferredcites →https://doi.org/10.1093/molbev/msy116openalex-snapshot
Divergent Allele Advantage at Human MHC Genes: Signatures of Past and Ongoing Selection
inferredcites →https://doi.org/10.1098/rspb.2009.2084openalex-snapshot
How pathogens drive genetic diversity: MHC, mechanisms and misunderstandings
inferredcites →https://doi.org/10.1098/rspb.2018.0819openalex-snapshot
Balancing selection and introgression of newt immune-response genes
inferredcites →https://doi.org/10.1101/gr.094052.109openalex-snapshot
Fast model-based estimation of ancestry in unrelated individuals
inferredcites →https://doi.org/10.1111/1755-0998.12209openalex-snapshot
hzar : hybrid zone analysis using an R software package
inferredcites →https://doi.org/10.1111/1755-0998.12453openalex-snapshot
amplisas : a web server for multilocus genotyping using next‐generation amplicon sequencing data
inferredcites →https://doi.org/10.1111/j.0014-3820.2001.tb00673.xopenalex-snapshot
CONSEQUENCES OF POPULATION STRUCTURE ON GENES UNDER BALANCING SELECTION
inferredcites →https://doi.org/10.1111/j.1365-294x.2011.05347.xopenalex-snapshot
Interspecific hybridization increases MHC class II diversity in two sister species of newts
inferredcites →https://doi.org/10.1111/j.1420-9101.2012.02599.xopenalex-snapshot
Hybridization and speciation
inferredcites →https://doi.org/10.1111/j.1471-8286.2007.01758.xopenalex-snapshot
Inference of population structure using multilocus genotype data: dominant markers and null alleles
inferredcites →https://doi.org/10.1111/j.1755-0998.2010.02847.xopenalex-snapshot
Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows
inferredcites →https://doi.org/10.1111/j.1755-0998.2010.02883.xopenalex-snapshot
Using differential introgression in hybrid zones to identify genomic regions involved in speciation
inferredcites →https://doi.org/10.1111/mec.12225openalex-snapshot
No evidence for nuclear introgression despite complete mt DNA replacement in the C arpathian newt ( L issotriton montandoni)
inferredcites →https://doi.org/10.1111/mec.12415openalex-snapshot
Adaptive introgression in animals: examples and comparison to new mutation and standing variation as sources of adaptive variation
inferredcites →https://doi.org/10.1111/mec.13226openalex-snapshot
Detecting balancing selection in genomes: limits and prospects
inferredcites →https://doi.org/10.1111/mec.13299openalex-snapshot
Local interspecies introgression is the main cause of extreme levels of intraspecific differentiation in mussels
inferredcites →https://doi.org/10.1111/mec.13582openalex-snapshot
Heterogeneous genome divergence, differential introgression, and the origin and structure of hybrid zones
inferredcites →https://doi.org/10.1111/mec.13724openalex-snapshot
Divergence history of the Carpathian and smooth newts modelled in space and time
inferredcites →https://doi.org/10.1111/mec.15251openalex-snapshot
Differential introgression across newt hybrid zones: Evidence from replicated transects
inferredcites →https://doi.org/10.1126/science.1209202openalex-snapshot
The Shaping of Modern Human Immune Systems by Multiregional Admixture with Archaic Humans
inferredcites →https://doi.org/10.1146/annurev-ecolsys-110316-022652openalex-snapshot
Analysis of Population Genomic Data from Hybrid Zones
inferredcites →https://doi.org/10.1146/annurev.genet.41.110306.130137openalex-snapshot
MHC, TSP, and the Origin of Species: From Immunogenetics to Evolutionary Genetics
inferredcites →https://doi.org/10.1371/journal.pcbi.1004627openalex-snapshot
Red Queen Processes Drive Positive Selection on Major Histocompatibility Complex (MHC) Genes
inferredcites →https://doi.org/10.1371/journal.pgen.1000168openalex-snapshot
Repeated Adaptive Introgression at a Gene under Multiallelic Balancing Selection
inferredcites →https://doi.org/10.1371/journal.pgen.1004438openalex-snapshot
Introgression from Domestic Goat Generated Variation at the Major Histocompatibility Complex of Alpine Ibex
inferredcites →https://doi.org/10.1534/g3.117.041178openalex-snapshot
Linkage Map ofLissotritonNewts Provides Insight into the Genetic Basis of Reproductive Isolation
inferredcites →https://doi.org/10.1534/genetics.104.035915openalex-snapshot
Balancing Selection in the Wild: Testing Population Genetics Theory of Self-Incompatibility in the Rare SpeciesBrassica insularis
inferredcites →https://doi.org/10.4137/ebo.s33488openalex-snapshot
Forward-in-Time, Spatially Explicit Modeling Software to Simulate Genetic Lineages under Selection
inferredcites →https://doi.org/10.5860/choice.43-2194openalex-snapshot
The geographic mosaic of coevolution
inferredcites →https://doi.org/10.7208/chicago/9780226118697.001.0001openalex-snapshot
The Geographic Mosaic of Coevolution
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