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Transition from background selection to associative overdominance promotes diversity in regions of low recombination

https://doi.org/10.1101/748004
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/0471250953.bi1112s47openalex-snapshot
BEDTools: The Swiss‐Army Tool for Genome Feature Analysis
inferredcites →https://doi.org/10.1007/978-1-4615-2383-3_4openalex-snapshot
Selection, Recombination, and DNA Polymorphism in Drosophila
inferredcites →https://doi.org/10.1007/978-3-0348-7527-1_9openalex-snapshot
Organization of genetic variation at the molecular level: Lessons from Drosophila
inferredcites →https://doi.org/10.1007/s00109-004-0529-0openalex-snapshot
The Ro 60�kDa autoantigen: insights into cellular function and role in autoimmunity
inferredcites →https://doi.org/10.1016/j.cub.2019.10.047openalex-snapshot
Patterns of Genetic Variability in Genomic Regions with Low Rates of Recombination
inferredcites →https://doi.org/10.1016/j.gde.2014.08.001openalex-snapshot
Advantageous diversity maintained by balancing selection in humans
inferredcites →https://doi.org/10.1016/j.gde.2016.07.008openalex-snapshot
The mutation rate in human evolution and demographic inference
inferredcites →https://doi.org/10.1016/j.sbi.2006.10.005openalex-snapshot
Molecular gymnastics: serpin structure, folding and misfolding
inferredcites →https://doi.org/10.1017/s0016672300002391openalex-snapshot
Development of associative overdominance through linkage disequilibrium in finite populations
inferredcites →https://doi.org/10.1017/s0016672300012684openalex-snapshot
Associative overdominance caused by linked detrimental mutations
inferredcites →https://doi.org/10.1017/s0016672300033619openalex-snapshot
The effect of recombination on background selection
inferredcites →https://doi.org/10.1038/356519a0openalex-snapshot
Levels of naturally occurring DNA polymorphism correlate with recombination rates in D. melanogaster
inferredcites →https://doi.org/10.1038/nature06258openalex-snapshot
A second generation human haplotype map of over 3.1 million SNPs
inferredcites →https://doi.org/10.1038/nature15393openalex-snapshot
A global reference for human genetic variation
inferredcites →https://doi.org/10.1046/j.1469-1809.2001.6510001.xopenalex-snapshot
How selection shapes variation of the human major histocompatibility complex: a review
inferredcites →https://doi.org/10.1073/pnas.0610385104openalex-snapshot
Adaptive genic evolution in the Drosophila genomes
inferredcites →https://doi.org/10.1073/pnas.0801848105openalex-snapshot
Fine-scale mapping of recombination rate in Drosophila refines its correlation to diversity and divergence
inferredcites →https://doi.org/10.1073/pnas.151244298openalex-snapshot
Patterns of DNA sequence polymorphism along chromosome 1 of maize ( Zea mays ssp. mays L.)
inferredcites →https://doi.org/10.1093/bioinformatics/btr330openalex-snapshot
The variant call format and VCFtools
inferredcites →https://doi.org/10.1093/gbe/evy054openalex-snapshot
Signatures of Long-Term Balancing Selection in Human Genomes
inferredcites →https://doi.org/10.1093/genetics/134.4.1289openalex-snapshot
The effect of deleterious mutations on neutral molecular variation.
inferredcites →https://doi.org/10.1093/genetics/141.4.1605openalex-snapshot
Deleterious background selection with recombination.
inferredcites →https://doi.org/10.1093/genetics/150.4.1585openalex-snapshot
DNA Polymorphism in Lycopersicon and Crossing-Over per Physical Length
inferredcites →https://doi.org/10.1093/genetics/162.3.1401openalex-snapshot
Patterns of Diversity and Recombination Along Chromosome 1 of Maize (Zea mays ssp. mays L.)
inferredcites →https://doi.org/10.1093/molbev/msy228openalex-snapshot
SLiM 3: Forward Genetic Simulations Beyond the Wright–Fisher Model
inferredcites →https://doi.org/10.1093/nar/gkv350openalex-snapshot
The BioMart community portal: an innovative alternative to large, centralized data repositories
inferredcites →https://doi.org/10.1101/606012openalex-snapshot
Deleterious Mutation Accumulation and the Long-Term Fate of Chromosomal Inversions
inferredcites →https://doi.org/10.1101/gr.3461105openalex-snapshot
Why do human diversity levels vary at a megabase scale?
inferredcites →https://doi.org/10.1111/j.0014-3820.2002.tb00188.xopenalex-snapshot
THE ECOLOGY AND GENETICS OF FITNESS IN CHLAMYDOMONAS. XII. REPEATED SEXUAL EPISODES INCREASE RATES OF ADAPTATION TO NOVEL ENVIRONMENTS
inferredcites →https://doi.org/10.1128/mcb.01060-06openalex-snapshot
Functional Requirement of Noncoding Y RNAs for Human Chromosomal DNA Replication
inferredcites →https://doi.org/10.1186/1471-2156-11-96openalex-snapshot
Contrasting population genetic patterns within the white-throated sparrow genome (Zonotrichia albicollis)
inferredcites →https://doi.org/10.1534/genetics.116.186890openalex-snapshot
The Genetic Cost of Neanderthal Introgression
inferredcites →https://doi.org/10.1534/genetics.116.188912openalex-snapshot
Resolving the Conflict Between Associative Overdominance and Background Selection
inferredcites →https://doi.org/10.1534/genetics.116.192708openalex-snapshot
Accuracy of Demographic Inferences from the Site Frequency Spectrum: The Case of the Yoruba Population
inferredcites →https://doi.org/10.7554/elife.36317openalex-snapshot
Background selection and biased gene conversion affect more than 95% of the human genome and bias demographic inferences

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1007/s11427-023-2547-2openalex-snapshot
The genetic basis and process of inbreeding depression in an elite hybrid rice
inferred← citeshttps://doi.org/10.1093/g3journal/jkag048openalex-snapshot
Recombination and the role of pseudo-overdominance in polyploid evolution
inferred← citeshttps://doi.org/10.1093/gbe/evae050openalex-snapshot
Background Selection From Unlinked Sites Causes Nonindependent Evolution of Deleterious Mutations
inferred← citeshttps://doi.org/10.1093/gbe/evaf107openalex-snapshot
Evolution of Functional Genomic Diversity During a Bottleneck
inferred← citeshttps://doi.org/10.1093/genetics/iyab055openalex-snapshot
Studying models of balancing selection using phase-type theory
inferred← citeshttps://doi.org/10.1093/genetics/iyac027openalex-snapshot
The effects of weak selection on neutral diversity at linked sites
inferred← citeshttps://doi.org/10.1093/genetics/iyae089openalex-snapshot
Selection leads to false inferences of introgression using popular methods
inferred← citeshttps://doi.org/10.1093/genetics/iyaf048openalex-snapshot
A model of Hill-Robertson interference caused by purifying selection in a nonrecombining genome
inferred← citeshttps://doi.org/10.1093/genetics/iyaf168openalex-snapshot
A gene-based model of fitness and its implications for genetic variation: linkage disequilibrium
inferred← citeshttps://doi.org/10.1093/molbev/msab143openalex-snapshot
Locally Adaptive Inversions Modulate Genetic Variation at Different Geographic Scales in a Seaweed Fly
inferred← citeshttps://doi.org/10.1093/molbev/msad100openalex-snapshot
Developing an Evolutionary Baseline Model for Humans: Jointly Inferring Purifying Selection with Population History
inferred← citeshttps://doi.org/10.1093/molbev/msad118openalex-snapshot
An Ancestral Balanced Inversion Polymorphism Confers Global Adaptation
inferred← citeshttps://doi.org/10.1101/2021.05.20.445016openalex-snapshot
Genetic load may increase or decrease with selfing depending upon the recombination environment
inferred← citeshttps://doi.org/10.1101/2021.05.30.446372openalex-snapshot
Gene surfing of underdominant alleles promotes formation of hybrid zones
inferred← citeshttps://doi.org/10.1101/2025.05.07.652751openalex-snapshot
Neanderthal introgressed ancestry reveals human genomic regions enriched with recessive deleterious mutations
inferred← citeshttps://doi.org/10.1101/606012openalex-snapshot
Deleterious Mutation Accumulation and the Long-Term Fate of Chromosomal Inversions
inferred← citeshttps://doi.org/10.1111/evo.14467openalex-snapshot
Chromosome size affects sequence divergence between species through the interplay of recombination and selection
inferred← citeshttps://doi.org/10.1111/jeb.14242openalex-snapshot
How chromosomal inversions reorient the evolutionary process
inferred← citeshttps://doi.org/10.1111/mec.15781openalex-snapshot
Expansion of frozen hybrids in the guppy ectoparasite, Gyrodactylus turnbulli
inferred← citeshttps://doi.org/10.1111/mec.15936openalex-snapshot
Unboxing mutations: Connecting mutation types with evolutionary consequences
inferred← citeshttps://doi.org/10.1111/mec.16609openalex-snapshot
Chromosomal inversions can limit adaptation to new environments
inferred← citeshttps://doi.org/10.1111/mec.17608openalex-snapshot
What Can Genome Sequence Data Reveal About Population Viability?
inferred← citeshttps://doi.org/10.1371/journal.pgen.1009411openalex-snapshot
Deleterious mutation accumulation and the long-term fate of chromosomal inversions
inferred← citeshttps://doi.org/10.1371/journal.pgen.1009797openalex-snapshot
Domestication reshaped the genetic basis of inbreeding depression in a maize landrace compared to its wild relative, teosinte
inferred← citeshttps://doi.org/10.1371/journal.pgen.1011144openalex-snapshot
A quantitative genetic model of background selection in humans
inferred← citeshttps://doi.org/10.1534/genetics.120.303734openalex-snapshot
How Good Are Predictions of the Effects of Selective Sweeps on Levels of Neutral Diversity?
inferred← citeshttps://doi.org/10.24072/pcjournal.224openalex-snapshot
Conditions for maintaining and eroding pseudo-overdominance and its contribution to inbreeding depression
inferred← citeshttps://doi.org/10.64898/2026.01.17.700129openalex-snapshot
Genomic signatures of reproductive isolation are decoupled from floral divergence in a long-standing hybrid zone
inferred← citeshttps://doi.org/10.7554/elife.76073openalex-snapshot
Complex fitness landscape shapes variation in a hyperpolymorphic species
inferred← citeshttps://doi.org/10.7554/elife.93338openalex-snapshot
The potential of inversions to accumulate balanced sexual antagonism is supported by simulations and Drosophila experiments
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