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Draft genome sequence of a popular Indian tea genotype TV-1 [ Camellia assamica L . ( O ). Kunze]

https://doi.org/10.1101/762161
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/s00122-002-1031-0openalex-snapshot
Exploiting EST databases for the development and characterization of gene-derived SSR-markers in barley (Hordeum vulgare L.)
inferredcites →https://doi.org/10.1016/j.molp.2017.04.002openalex-snapshot
The Tea Tree Genome Provides Insights into Tea Flavor and Independent Evolution of Caffeine Biosynthesis
inferredcites →https://doi.org/10.1016/j.ygeno.2019.04.018openalex-snapshot
Decoding and analysis of organelle genomes of Indian tea (Camellia assamica) for phylogenetic confirmation
inferredcites →https://doi.org/10.1038/nbt.2727openalex-snapshot
Chromosome-scale scaffolding of de novo genome assemblies based on chromatin interactions
inferredcites →https://doi.org/10.1038/ncomms14515openalex-snapshot
Scaffolding and completing genome assemblies in real-time with nanopore sequencing
inferredcites →https://doi.org/10.1038/nprot.2007.310openalex-snapshot
Estimation of nuclear DNA content in plants using flow cytometry
inferredcites →https://doi.org/10.1038/s41597-019-0127-1openalex-snapshot
The tea plant reference genome and improved gene annotation using long-read and paired-end sequencing data
inferredcites →https://doi.org/10.1073/pnas.1719622115openalex-snapshot
Draft genome sequence of Camellia sinensis var. sinensis provides insights into the evolution of the tea genome and tea quality
inferredcites →https://doi.org/10.1093/bioinformatics/btm071openalex-snapshot
CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes
inferredcites →https://doi.org/10.1093/bioinformatics/btv351openalex-snapshot
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
inferredcites →https://doi.org/10.1101/gr.170720.113openalex-snapshot
Efficient de novo assembly of highly heterozygous genomes from whole-genome shotgun short reads
inferredcites →https://doi.org/10.1186/2047-217x-1-18openalex-snapshot
SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler
inferredcites →https://doi.org/10.1186/s12859-015-0663-4openalex-snapshot
Sealer: a scalable gap-closing application for finishing draft genomes
inferredcites →https://doi.org/10.1371/journal.pone.0064981openalex-snapshot
Genome Size Variation among and within Camellia Species by Using Flow Cytometric Analysis
inferredcites →https://doi.org/10.2307/4119796openalex-snapshot
Phytochemical Ecology, Phytochemical Society Symposia Series no. 8

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1007/978-981-15-8868-6_1openalex-snapshot
Introduction
inferred← citeshttps://doi.org/10.1007/978-981-15-8868-6_2openalex-snapshot
Genetics and Breeding
inferred← citeshttps://doi.org/10.1007/978-981-15-8868-6_8openalex-snapshot
Functional Genomics
inferred← citeshttps://doi.org/10.1007/978-981-97-2166-5_4openalex-snapshot
Biotechnology Towards Improvement of Plants for Enhancement of Natural Products
inferred← citeshttps://doi.org/10.1007/s00344-022-10761-8openalex-snapshot
Genome-Wide Identification of Histone Modification (HM) Gene Family and Their Expression Patterns Under Abiotic Stress and Different Developmental Stages of Tea (Camellia assamica)
inferred← citeshttps://doi.org/10.1016/b978-0-323-89778-5.00021-0openalex-snapshot
Tea plant genome sequencing: prospect for crop improvement using genomics tools
inferred← citeshttps://doi.org/10.1080/10408398.2020.1868970openalex-snapshot
How does tea ( Camellia sinensis ) produce specialized metabolites which determine its unique quality and function: a review
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