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The ATG5 Interactome Links Clathrin Vesicular Trafficking With The ATG8 Lipidation Machinery For Autophagosome Assembly
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/embr.201337995openalex-snapshot
TBC1D5 and the AP2 complex regulate ATG9 trafficking and initiation of autophagy
inferredcites →https://doi.org/10.1007/s13277-015-4587-4openalex-snapshot
SLC27A4 regulate ATG4B activity and control reactions to chemotherapeutics-induced autophagy in human lung cancer cells
inferredcites →https://doi.org/10.1016/j.cell.2010.04.009openalex-snapshot
Mitochondria Supply Membranes for Autophagosome Biogenesis during Starvation
inferredcites →https://doi.org/10.1016/j.cell.2011.07.021openalex-snapshot
Rescue of ΔF508-CFTR Trafficking via a GRASP-Dependent Unconventional Secretion Pathway
inferredcites →https://doi.org/10.1016/j.cell.2013.08.044openalex-snapshot
Diverse Autophagosome Membrane Sources Coalesce in Recycling Endosomes
inferredcites →https://doi.org/10.1016/j.cell.2019.05.056openalex-snapshot
LC3-Associated Endocytosis Facilitates β-Amyloid Clearance and Mitigates Neurodegeneration in Murine Alzheimer’s Disease
inferredcites →https://doi.org/10.1016/j.celrep.2016.04.002openalex-snapshot
Macroautophagy Proteins Control MHC Class I Levels on Dendritic Cells and Shape Anti-viral CD8+ T Cell Responses
inferredcites →https://doi.org/10.1016/j.celrep.2019.04.034openalex-snapshot
The Ion Transporter NKCC1 Links Cell Volume to Cell Mass Regulation by Suppressing mTORC1
inferredcites →https://doi.org/10.1016/j.devcel.2013.03.005openalex-snapshot
The TBC/RabGAP Armus Coordinates Rac1 and Rab7 Functions during Autophagy
inferredcites →https://doi.org/10.1016/j.devcel.2018.03.008openalex-snapshot
The RAB11A-Positive Compartment Is a Primary Platform for Autophagosome Assembly Mediated by WIPI2 Recognition of PI3P-RAB11A
inferredcites →https://doi.org/10.1016/j.immuni.2007.07.004openalex-snapshot
Innate and Adaptive Immunity through Autophagy
inferredcites →https://doi.org/10.1016/j.immuni.2009.12.006openalex-snapshot
In Vivo Requirement for Atg5 in Antigen Presentation by Dendritic Cells
inferredcites →https://doi.org/10.1016/j.molcel.2011.12.036openalex-snapshot
A Mammalian Autophagosome Maturation Mechanism Mediated by TECPR1 and the Atg12-Atg5 Conjugate
inferredcites →https://doi.org/10.1016/j.molcel.2017.05.020openalex-snapshot
Autophagy-Dependent Shuttling of TBC1D5 Controls Plasma Membrane Translocation of GLUT1 and Glucose Uptake
inferredcites →https://doi.org/10.1016/j.tcb.2015.02.005openalex-snapshot
Cargo adaptors: structures illuminate mechanisms regulating vesicle biogenesis
inferredcites →https://doi.org/10.1016/j.tcb.2016.03.006openalex-snapshot
Digesting the Expanding Mechanisms of Autophagy
inferredcites →https://doi.org/10.1038/cdd.2013.75openalex-snapshot
Molecular mechanisms of ATP secretion during immunogenic cell death
inferredcites →https://doi.org/10.1038/emboj.2011.398openalex-snapshot
Autophagy‐based unconventional secretory pathway for extracellular delivery of IL‐1β
inferredcites →https://doi.org/10.1038/emboj.2012.278openalex-snapshot
Mechanism and functions of membrane binding by the Atg5–Atg12/Atg16 complex during autophagosome formation
inferredcites →https://doi.org/10.1038/emboj.2013.104openalex-snapshot
Unconventional protein secretion: an evolving mechanism
inferredcites →https://doi.org/10.1038/nature09204openalex-snapshot
Network organization of the human autophagy system
inferredcites →https://doi.org/10.1038/nature12360openalex-snapshot
Spatiotemporal control of endocytosis by phosphatidylinositol-3,4-bisphosphate
inferredcites →https://doi.org/10.1038/ncb1991openalex-snapshot
A subdomain of the endoplasmic reticulum forms a cradle for autophagosome formation
inferredcites →https://doi.org/10.1038/ncb2078openalex-snapshot
Plasma membrane contributes to the formation of pre-autophagosomal structures
inferredcites →https://doi.org/10.1038/ncb2886openalex-snapshot
Autophagy variation within a cell population determines cell fate through selective degradation of Fap-1
inferredcites →https://doi.org/10.1038/ncomms10533openalex-snapshot
Autophagy regulates Notch degradation and modulates stem cell development and neurogenesis
inferredcites →https://doi.org/10.1038/ncomms8888openalex-snapshot
Actin nucleation by WH2 domains at the autophagosome
inferredcites →https://doi.org/10.1038/ni.3156openalex-snapshot
Intrinsic host restrictions to HIV-1 and mechanisms of viral escape
inferredcites →https://doi.org/10.1038/nm.2928openalex-snapshot
Endothelial PI3K-C2α, a class II PI3K, has an essential role in angiogenesis and vascular barrier function
inferredcites →https://doi.org/10.1038/nrm.2017.132openalex-snapshot
Mechanisms of clathrin-mediated endocytosis
inferredcites →https://doi.org/10.1038/nrm3151openalex-snapshot
Molecular mechanism and physiological functions of clathrin-mediated endocytosis
inferredcites →https://doi.org/10.1038/nrm3379openalex-snapshot
Coordination between RAB GTPase and phosphoinositide regulation and functions
inferredcites →https://doi.org/10.1038/nrm3696openalex-snapshot
The autophagosome: origins unknown, biogenesis complex
inferredcites →https://doi.org/10.1038/nsmb.2431openalex-snapshot
Structure of the human ATG12~ATG5 conjugate required for LC3 lipidation in autophagy
inferredcites →https://doi.org/10.1038/s41580-018-0003-4openalex-snapshot
Mechanism and medical implications of mammalian autophagy
inferredcites →https://doi.org/10.1042/bj20071427openalex-snapshot
The regulation and function of Class III PI3Ks: novel roles for Vps34
inferredcites →https://doi.org/10.1042/bj20120008openalex-snapshot
Regulation and cellular functions of class II phosphoinositide 3-kinases
inferredcites →https://doi.org/10.1042/bse0550039openalex-snapshot
Two ubiquitin-like conjugation systems that mediate membrane formation during autophagy
inferredcites →https://doi.org/10.1042/bst20140183openalex-snapshot
Dynamics of autophagosome formation: a pulse and a sequence of waves
inferredcites →https://doi.org/10.1042/bst20170128openalex-snapshot
Autophagy in the context of the cellular membrane-trafficking system: the enigma of Atg9 vesicles
inferredcites →https://doi.org/10.1073/pnas.0707269105openalex-snapshot
Clathrin light chains function in mannose phosphate receptor trafficking via regulation of actin assembly
inferredcites →https://doi.org/10.1074/jbc.m112310200openalex-snapshot
HIP1 and HIP12 Display Differential Binding to F-actin, AP2, and Clathrin
inferredcites →https://doi.org/10.1074/jbc.m312645200openalex-snapshot
HIP1 and HIP1r Stabilize Receptor Tyrosine Kinases and Bind 3-Phosphoinositides via Epsin N-terminal Homology Domains
inferredcites →https://doi.org/10.1074/jbc.m408430200openalex-snapshot
Huntingtin Interacting Protein 1 (HIP1) Regulates Clathrin Assembly through Direct Binding to the Regulatory Region of the Clathrin Light Chain
inferredcites →https://doi.org/10.1074/jbc.m408454200openalex-snapshot
Huntingtin-interacting Protein 1 (Hip1) and Hip1-related Protein (Hip1R) Bind the Conserved Sequence of Clathrin Light Chains and Thereby Influence Clathrin Assembly in Vitro and Actin Distribution in Vivo
inferredcites →https://doi.org/10.1080/15548627.2015.1110668openalex-snapshot
The integration of autophagy and cellular trafficking pathways via RAB GAPs
inferredcites →https://doi.org/10.1083/jcb.147.7.1503openalex-snapshot
An Actin-Binding Protein of the Sla2/Huntingtin Interacting Protein 1 Family Is a Novel Component of Clathrin-Coated Pits and Vesicles
inferredcites →https://doi.org/10.1083/jcb.152.4.657openalex-snapshot
Dissection of Autophagosome Formation Using Apg5-Deficient Mouse Embryonic Stem Cells
inferredcites →https://doi.org/10.1083/jcb.200106089openalex-snapshot
The actin-binding protein Hip1R associates with clathrin during early stages of endocytosis and promotes clathrin assembly in vitro
inferredcites →https://doi.org/10.1083/jcb.200403120openalex-snapshot
Actin dynamics coupled to clathrin-coated vesicle formation at the trans-Golgi network
inferredcites →https://doi.org/10.1083/jcb.200803137openalex-snapshot
Autophagosome formation from membrane compartments enriched in phosphatidylinositol 3-phosphate and dynamically connected to the endoplasmic reticulum
inferredcites →https://doi.org/10.1083/jcb.200804154openalex-snapshot
A CD317/tetherin–RICH2 complex plays a critical role in the organization of the subapical actin cytoskeleton in polarized epithelial cells
inferredcites →https://doi.org/10.1083/jcb.201008107openalex-snapshot
OATL1, a novel autophagosome-resident Rab33B-GAP, regulates autophagosomal maturation
inferredcites →https://doi.org/10.1083/jcb.201111079openalex-snapshot
TBC1D14 regulates autophagosome formation via Rab11- and ULK1-positive recycling endosomes
inferredcites →https://doi.org/10.1083/jcb.201205129openalex-snapshot
Membrane remodeling by the PX-BAR protein SNX18 promotes autophagosome formation
inferredcites →https://doi.org/10.1083/jcb.201706157openalex-snapshot
Beyond self-eating: The control of nonautophagic functions and signaling pathways by autophagy-related proteins
inferredcites →https://doi.org/10.1083/jcb.201809032openalex-snapshot
COPII vesicles contribute to autophagosomal membranes
inferredcites →https://doi.org/10.1083/jcb.201811139openalex-snapshot
ATG2 transports lipids to promote autophagosome biogenesis
inferredcites →https://doi.org/10.1083/jcb.201901115openalex-snapshot
ATG9A shapes the forming autophagosome through Arfaptin 2 and phosphatidylinositol 4-kinase IIIβ
inferredcites →https://doi.org/10.1091/mbc.e08-03-0309openalex-snapshot
The Atg8 Conjugation System Is Indispensable for Proper Development of Autophagic Isolation Membranes in Mice
inferredcites →https://doi.org/10.1097/mol.0b013e3281338558openalex-snapshot
Fatty acid transport proteins
inferredcites →https://doi.org/10.1101/cshperspect.a018358openalex-snapshot
Endocytosis and Autophagy: Exploitation or Cooperation?
inferredcites →https://doi.org/10.1126/science.aaf6136openalex-snapshot
The ATG conjugation systems are important for degradation of the inner autophagosomal membrane
inferredcites →https://doi.org/10.1128/mcb.24.10.4329-4340.2004openalex-snapshot
Hip1-related Mutant Mice Grow and Develop Normally but Have Accelerated Spinal Abnormalities and Dwarfism in the Absence of HIP1
inferredcites →https://doi.org/10.1159/000430167openalex-snapshot
Inhibition of Notch Signaling Promotes the Adipogenic Differentiation of Mesenchymal Stem Cells Through Autophagy Activation and PTEN-PI3K/AKT/mTOR Pathway
inferredcites →https://doi.org/10.1182/blood-2012-07-441832openalex-snapshot
Surface CD107a/LAMP-1 protects natural killer cells from degranulation-associated damage
inferredcites →https://doi.org/10.1242/jcs.00928openalex-snapshot
ENTH/ANTH proteins and clathrin-mediated membrane budding
inferredcites →https://doi.org/10.1242/jcs.103630openalex-snapshot
Diversity in unconventional protein secretion
inferredcites →https://doi.org/10.1371/journal.pgen.1008088openalex-snapshot
Mutations in PIK3C2A cause syndromic short stature, skeletal abnormalities, and cataracts associated with ciliary dysfunction
inferredcites →https://doi.org/10.1371/journal.pone.0076405openalex-snapshot
Regulation of Mammalian Autophagy by Class II and III PI 3-Kinases through PI3P Synthesis
inferredcites →https://doi.org/10.15252/embj.201592695openalex-snapshot
TBC1D14 regulates autophagy via the TRAPP complex and ATG9 traffic
inferredcites →https://doi.org/10.15252/embj.201695081openalex-snapshot
Dedicated SNAREs and specialized TRIM cargo receptors mediate secretory autophagy
inferredcites →https://doi.org/10.15252/embr.201744559openalex-snapshot
Remodeling of ER‐exit sites initiates a membrane supply pathway for autophagosome biogenesis
inferredcites →https://doi.org/10.15252/embr.201744837openalex-snapshot
SNX18 regulates ATG9A trafficking from recycling endosomes by recruiting Dynamin‐2
inferredcites →https://doi.org/10.1681/asn.2014100967openalex-snapshot
Phosphoinositide 3-Kinase-C2α Regulates Polycystin-2 Ciliary Entry and Protects against Kidney Cyst Formation
inferredcites →https://doi.org/10.3892/ol.2017.6757openalex-snapshot
LAMP1 expression is associated with poor prognosis in breast cancer
inferredcites →https://doi.org/10.4161/auto.7.12.18025openalex-snapshot
Atg16L2, a novel isoform of mammalian Atg16L that is not essential for canonical autophagy despite forming an Atg12–5-16L2 complex
inferredcites →https://doi.org/10.7554/elife.14023openalex-snapshot
Notch1 regulated autophagy controls survival and suppressor activity of activated murine T-regulatory cells
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.3390/cells9092008openalex-snapshot
Atg8-Family Proteins—Structural Features and Molecular Interactions in Autophagy and Beyond
inferred← citeshttps://doi.org/10.3390/ijms22010085openalex-snapshot
Lack of GABARAP-Type Proteins Is Accompanied by Altered Golgi Morphology and Surfaceome Composition
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