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A catalog of homoplasmic and heteroplasmic mitochondrial DNA variants in humans

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/0471250953.bi0123s44openalex-snapshot
mtDNA Variation and Analysis Using Mitomap and Mitomaster
inferredcites →https://doi.org/10.1002/ajmg.a.20135openalex-snapshot
Low penetrance of the 14484 LHON mutation when it arises in a non‐haplogroup J mtDNA background
inferredcites →https://doi.org/10.1002/ana.21217openalex-snapshot
Prevalence of mitochondrial DNA disease in adults
inferredcites →https://doi.org/10.1002/ana.24362openalex-snapshot
Prevalence of nuclear and mitochondrial DNA mutations related to adult mitochondrial disease
inferredcites →https://doi.org/10.1002/humu.1380060405openalex-snapshot
Phylogenetic analysis of Leber's hereditary optic neuropathy mitochondrial DNA's indicates multiple independent occurrences of the common mutations
inferredcites →https://doi.org/10.1002/humu.20921openalex-snapshot
Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation
inferredcites →https://doi.org/10.1016/j.cell.2020.02.051openalex-snapshot
Mitochondrial Diseases: Hope for the Future
inferredcites →https://doi.org/10.1016/j.cmet.2014.07.001openalex-snapshot
Making Proteins in the Powerhouse
inferredcites →https://doi.org/10.1016/j.mito.2015.08.004openalex-snapshot
The presence of highly disruptive 16S rRNA mutations in clinical samples indicates a wider role for mutations of the mitochondrial ribosome in human disease
inferredcites →https://doi.org/10.1016/s0140-6736(02)11310-9openalex-snapshot
Accumulation of mitochondrial DNA mutations in ageing, cancer, and mitochondrial disease: is there a common mechanism?
inferredcites →https://doi.org/10.1038/13779openalex-snapshot
Reanalysis and revision of the Cambridge reference sequence for human mitochondrial DNA
inferredcites →https://doi.org/10.1038/290457a0openalex-snapshot
Sequence and organization of the human mitochondrial genome
inferredcites →https://doi.org/10.1038/35057062openalex-snapshot
Initial sequencing and analysis of the human genome
inferredcites →https://doi.org/10.1038/gim.2015.30openalex-snapshot
Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology
inferredcites →https://doi.org/10.1038/gim.2017.26openalex-snapshot
Using high-resolution variant frequencies to empower clinical genome interpretation
inferredcites →https://doi.org/10.1038/ng.806openalex-snapshot
A framework for variation discovery and genotyping using next-generation DNA sequencing data
inferredcites →https://doi.org/10.1038/s41436-019-0746-0openalex-snapshot
Interpretation of mitochondrial tRNA variants
inferredcites →https://doi.org/10.1038/s41588-018-0264-zopenalex-snapshot
Mitochondrial genetic medicine
inferredcites →https://doi.org/10.1038/s41588-018-0294-6openalex-snapshot
A map of constrained coding regions in the human genome
inferredcites →https://doi.org/10.1038/s41588-019-0557-xopenalex-snapshot
Comprehensive molecular characterization of mitochondrial genomes in human cancers
inferredcites →https://doi.org/10.1038/sj.ejhg.5201828openalex-snapshot
Epidemiology and penetrance of Leber hereditary optic neuropathy in Finland
inferredcites →https://doi.org/10.1086/302311openalex-snapshot
Relaxed Replication of mtDNA: A Model with Implications for the Expression of Disease
inferredcites →https://doi.org/10.1086/302902openalex-snapshot
The Mutation Rate in the Human mtDNA Control Region
inferredcites →https://doi.org/10.1086/346066openalex-snapshot
The Epidemiology of Leber Hereditary Optic Neuropathy in the North East of England
inferredcites →https://doi.org/10.1086/501236openalex-snapshot
Haplogroup Effects and Recombination of Mitochondrial DNA: Novel Clues from the Analysis of Leber Hereditary Optic Neuropathy Pedigrees
inferredcites →https://doi.org/10.1093/bioinformatics/btq033openalex-snapshot
BEDTools: a flexible suite of utilities for comparing genomic features
inferredcites →https://doi.org/10.1093/hmg/ddt490openalex-snapshot
The role of the mitochondrial ribosome in human disease: searching for mutations in 12S mitochondrial rRNA with high disruptive potential
inferredcites →https://doi.org/10.1093/nar/gky1024openalex-snapshot
HmtVar: a new resource for human mitochondrial variations and pathogenicity data
inferredcites →https://doi.org/10.1101/115717openalex-snapshot
The Sentieon Genomics Tools - A fast and accurate solution to variant calling from next-generation sequence data
inferredcites →https://doi.org/10.1126/science.3201231openalex-snapshot
Mitochondrial DNA Mutation Associated with Leber's Hereditary Optic Neuropathy
inferredcites →https://doi.org/10.1126/science.aau6520openalex-snapshot
Germline selection shapes human mitochondrial DNA diversity
inferredcites →https://doi.org/10.1371/journal.pcbi.1005867openalex-snapshot
Predicting the pathogenicity of novel variants in mitochondrial tRNA with MitoTIP
inferredcites →https://doi.org/10.1371/journal.pgen.1006620openalex-snapshot
Mutations in mitochondrial DNA causing tubulointerstitial kidney disease
inferredcites →https://doi.org/10.1371/journal.pmed.1001779openalex-snapshot
UK Biobank: An Open Access Resource for Identifying the Causes of a Wide Range of Complex Diseases of Middle and Old Age
inferredcites →https://doi.org/10.3389/fgene.2019.00736openalex-snapshot
Sentieon DNASeq Variant Calling Workflow Demonstrates Strong Computational Performance and Accuracy
inferredcites →https://doi.org/10.6084/m9.figshare.963153.v1openalex-snapshot
Aligning sequence reads, clone sequences and assembly con*gs with BWA-MEM
inferredcites →https://doi.org/10.7554/elife.21592openalex-snapshot
Mitochondrial respiratory gene expression is suppressed in many cancers

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1002/ajmg.a.62455openalex-snapshot
A recurrent de novo variant supports KCNC2 involvement in the pathogenesis of developmental and epileptic encephalopathy
inferred← citeshttps://doi.org/10.1002/alz.70839openalex-snapshot
Mitochondrial haplogroups, but not heteroplasmy, are associated with midlife cognitive function
inferred← citeshttps://doi.org/10.1002/jdn.70100openalex-snapshot
No Association Between Autism Spectrum Disorder and Mitochondrial DNA Variants: A Comprehensive Genetic Study in Trakya Population
inferred← citeshttps://doi.org/10.1007/16833_2024_270openalex-snapshot
Exploring the Role of Mitochondrial DNA Mutations in Cancer Development and Diagnosis
inferred← citeshttps://doi.org/10.1007/s10048-023-00724-wopenalex-snapshot
Novel potentially pathogenic variants detected in genes causing intellectual disability and epilepsy in Polish families
inferred← citeshttps://doi.org/10.1007/s10048-025-00820-zopenalex-snapshot
Mitochondrial DNA variants revealed by whole exome sequencing: from screening to diagnosis and follow-up
inferred← citeshttps://doi.org/10.1016/j.fsigen.2026.103528openalex-snapshot
Reduced amplification and amplicon dropout in PCR-based mitochondrial DNA massively parallel sequencing kits
inferred← citeshttps://doi.org/10.1016/j.jare.2023.01.021openalex-snapshot
North and East African mitochondrial genetic variation needs further characterization towards precision medicine
inferred← citeshttps://doi.org/10.1016/j.mito.2024.101970openalex-snapshot
The maternal genetic history of tribal populations of Chhattisgarh, India
inferred← citeshttps://doi.org/10.1016/j.mitoco.2025.08.001openalex-snapshot
Age-related dynamics of m.189A>G and m.408T>A variants in skeletal muscle of an osteoarthritic Cohort: Connections to BMI and muscle strength
inferred← citeshttps://doi.org/10.1016/j.xhgg.2025.100441openalex-snapshot
Mitochondrial DNA variant detection in over 6,500 rare disease families by the systematic analysis of exome and genome sequencing data resolves undiagnosed cases
inferred← citeshttps://doi.org/10.1038/s41380-023-02096-xopenalex-snapshot
Deep exome sequencing identifies enrichment of deleterious mosaic variants in neurodevelopmental disorder genes and mitochondrial tRNA regions in bipolar disorder
inferred← citeshttps://doi.org/10.1038/s41380-025-03071-4openalex-snapshot
Single-molecule DNA analysis implicates brain mitochondria pathology in bipolar disorder
inferred← citeshttps://doi.org/10.1038/s41431-021-01034-1openalex-snapshot
Variant pathogenic prediction by locus variability: the importance of the current picture of evolution
inferred← citeshttps://doi.org/10.1038/s41467-023-40797-7openalex-snapshot
APOGEE 2: multi-layer machine-learning model for the interpretable prediction of mitochondrial missense variants
inferred← citeshttps://doi.org/10.1038/s41467-023-41785-7openalex-snapshot
Deleterious heteroplasmic mitochondrial mutations are associated with an increased risk of overall and cancer-specific mortality
inferred← citeshttps://doi.org/10.1038/s41467-026-70399-yopenalex-snapshot
Single-cell multi-omic analysis of mitochondrial mutational mosaicism and dynamics
inferred← citeshttps://doi.org/10.1038/s41586-024-08048-xopenalex-snapshot
Quantifying constraint in the human mitochondrial genome
inferred← citeshttps://doi.org/10.1038/s41598-022-16164-9openalex-snapshot
Genomic analysis of a novel Neanderthal from Mezmaiskaya Cave provides insights into the genetic relationships of Middle Palaeolithic populations
inferred← citeshttps://doi.org/10.1038/s42003-024-06819-wopenalex-snapshot
Haplotype variability in mitochondrial rRNA predisposes to metabolic syndrome
inferred← citeshttps://doi.org/10.1038/s42255-021-00378-8openalex-snapshot
Respiratory complex and tissue lineage drive recurrent mutations in tumour mtDNA
inferred← citeshttps://doi.org/10.1073/pnas.2505704122openalex-snapshot
Cell type–specific purifying selection of synonymous mitochondrial DNA variation
inferred← citeshttps://doi.org/10.1093/bioinformatics/btac216openalex-snapshot
MitoVisualize: a resource for analysis of variants in human mitochondrial RNAs and DNA
inferred← citeshttps://doi.org/10.1093/gpbjnl/qzaf098openalex-snapshot
Mitochondrial Genome Variants and Nuclear Mitochondrial DNA Segments in 7331 Individuals from NyuWa and 1KGP
inferred← citeshttps://doi.org/10.1093/nar/gkab901openalex-snapshot
A replication-linked mutational gradient drives somatic mutation accumulation and influences germline polymorphisms and genome composition in mitochondrial DNA
inferred← citeshttps://doi.org/10.1101/2020.08.18.256362openalex-snapshot
Respiratory complex and tissue lineage drive mutational patterns in the tumor mitochondrial genome
inferred← citeshttps://doi.org/10.1101/2022.09.20.22280151openalex-snapshot
Deleterious heteroplasmic mitochondrial mutations increase risk of overall and cancer-specific mortality
inferred← citeshttps://doi.org/10.1101/2022.10.14.512116openalex-snapshot
Aneuploidy in human embryos is associated with a maternal age-independent increase in mitochondrial DNA content and an enrichment of ultra-rare mitochondrial DNA variants
inferred← citeshttps://doi.org/10.1101/2023.04.23.537997openalex-snapshot
Codon affinity in mitochondrial DNA shapes evolutionary and somatic fitness
inferred← citeshttps://doi.org/10.1101/2024.09.02.610808openalex-snapshot
Mitochondrial Deletions and Healthspan: Lessons from the Common Repeat
inferred← citeshttps://doi.org/10.1101/2025.07.11.664452openalex-snapshot
Mitochondrial clone tracing within spatially intact human tissues
inferred← citeshttps://doi.org/10.1101/gr.276013.121openalex-snapshot
Mitochondrial DNA variation across 56,434 individuals in gnomAD
inferred← citeshttps://doi.org/10.1155/2022/5344418openalex-snapshot
Mitochondrial Haplogroup Classification of Ancient DNA Samples Using Haplotracker
inferred← citeshttps://doi.org/10.1186/s13023-022-02428-0openalex-snapshot
Is population frequency a useful criterion to assign pathogenicity to newly described mitochondrial DNA variants?
inferred← citeshttps://doi.org/10.1186/s13059-022-02732-9openalex-snapshot
Balanced mitochondrial and cytosolic translatomes underlie the biogenesis of human respiratory complexes
inferred← citeshttps://doi.org/10.1242/bio.059072openalex-snapshot
The population frequency of human mitochondrial DNA variants is highly dependent upon mutational bias
inferred← citeshttps://doi.org/10.3389/bjbs.2025.15375openalex-snapshot
Mitochondrial DNA Mutations and Epigenetic Regulation in Type 2 Diabetes Mellitus Development
inferred← citeshttps://doi.org/10.3389/fgene.2021.619950openalex-snapshot
New Insights Into Mitochondrial DNA Reconstruction and Variant Detection in Ancient Samples
inferred← citeshttps://doi.org/10.3389/fgene.2022.692257openalex-snapshot
Benchmarking the Effectiveness and Accuracy of Multiple Mitochondrial DNA Variant Callers: Practical Implications for Clinical Application
inferred← citeshttps://doi.org/10.3389/fgene.2022.887644openalex-snapshot
Benchmarking Low-Frequency Variant Calling With Long-Read Data on Mitochondrial DNA
inferred← citeshttps://doi.org/10.3389/fgene.2023.1182288openalex-snapshot
Case report: A rare variant m.4135T>C in the MT-ND1 gene leads to Leber hereditary optic neuropathy and altered respiratory chain supercomplexes
inferred← citeshttps://doi.org/10.3389/fneur.2021.652590openalex-snapshot
Case Report: A Novel Mutation in the Mitochondrial MT-ND5 Gene Is Associated With Leber Hereditary Optic Neuropathy (LHON)
inferred← citeshttps://doi.org/10.3389/fneur.2021.657317openalex-snapshot
Leber's Hereditary Optic Neuropathy: A Report on Novel mtDNA Pathogenic Variants
inferred← citeshttps://doi.org/10.3389/fonc.2024.1394699openalex-snapshot
Our current understanding of the biological impact of endometrial cancer mtDNA genome mutations and their potential use as a biomarker
inferred← citeshttps://doi.org/10.3390/genes13071245openalex-snapshot
A Novel MTTK Gene Variant m.8315A>C as a Cause of MERRF Syndrome
inferred← citeshttps://doi.org/10.3390/genes14081534openalex-snapshot
Mitochondrial DNA in Human Diversity and Health: From the Golden Age to the Omics Era
inferred← citeshttps://doi.org/10.3390/ijms222112031openalex-snapshot
From Forensics to Clinical Research: Expanding the Variant Calling Pipeline for the Precision ID mtDNA Whole Genome Panel
inferred← citeshttps://doi.org/10.3390/ijms25042438openalex-snapshot
Screening for Rare Mitochondrial Genome Variants Reveals a Potentially Novel Association between MT-CO1 and MT-TL2 Genes and Diabetes Phenotype
inferred← citeshttps://doi.org/10.3390/ijms27041773openalex-snapshot
Somatic Mutations in Nuclear and Mitochondrial Genes of Mitochondrial Proteins in Primary and Recurrent Glioblastoma
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