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rsCaMPARI: an erasable marker of neuronal activity

https://doi.org/10.1101/798298
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Phototoxicity in live fluorescence microscopy, and how to avoid it
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Specific regulation of immediate early genes by patterned neuronal activity
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Actions of ultraviolet light on cellular structures
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The regulation and function of c-fos and other immediate early genes in the nervous system
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Arc, a growth factor and activity-regulated gene, encodes a novel cytoskeleton-associated protein that is enriched in neuronal dendrites
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Photoswitchable fluorescent proteins: ten years of colorful chemistry and exciting applications
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Protein production by auto-induction in high-density shaking cultures
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Calcium dynamics associated with a single action potential in a CNS presynaptic terminal
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[14] Measurement of cytosolic free Ca2+ with quin2
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HaloTag: A Novel Protein Labeling Technology for Cell Imaging and Protein Analysis
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Rapid increase of an immediate early gene messenger RNA in hippocampal neurons by synaptic NMDA receptor activation
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Diffraction-unlimited all-optical imaging and writing with a photochromic GFP
inferredcites →https://doi.org/10.1038/nature12354openalex-snapshot
Ultrasensitive fluorescent proteins for imaging neuronal activity
inferredcites →https://doi.org/10.1038/nbt.3902openalex-snapshot
A calcium- and light-gated switch to induce gene expression in activated neurons
inferredcites →https://doi.org/10.1038/nbt.3909openalex-snapshot
A light- and calcium-gated transcription factor for imaging and manipulating activated neurons
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Improved monomeric red, orange and yellow fluorescent proteins derived from Discosoma sp. red fluorescent protein
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Enzymatic assembly of DNA molecules up to several hundred kilobases
inferredcites →https://doi.org/10.1038/nmeth.1398openalex-snapshot
Imaging neural activity in worms, flies and mice with improved GCaMP calcium indicators
inferredcites →https://doi.org/10.1038/nmeth.2019openalex-snapshot
Fiji: an open-source platform for biological-image analysis
inferredcites →https://doi.org/10.1038/nmeth.2021openalex-snapshot
Rational design of true monomeric and bright photoactivatable fluorescent proteins
inferredcites →https://doi.org/10.1038/nmeth.2836openalex-snapshot
Independent optical excitation of distinct neural populations
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Systematic characterization of maturation time of fluorescent proteins in living cells
inferredcites →https://doi.org/10.1038/nn.4359openalex-snapshot
Genetically encoded indicators of neuronal activity
inferredcites →https://doi.org/10.1038/s41467-018-06935-2openalex-snapshot
Improved methods for marking active neuron populations
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Improving brightness and photostability of green and red fluorescent proteins for live cell imaging and FRET reporting
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Structure and mechanism of the reversible photoswitch of a fluorescent protein
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Structural basis for reversible photoswitching in Dronpa
inferredcites →https://doi.org/10.1073/pnas.0805949105openalex-snapshot
Structural characterization of IrisFP, an optical highlighter undergoing multiple photo-induced transformations
inferredcites →https://doi.org/10.1073/pnas.1113770109openalex-snapshot
A unique series of reversibly switchable fluorescent proteins with beneficial properties for various applications
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C-fos expression and 2-deoxyglucose uptake in the olfactory bulb of odour-stimulated awake rats
inferredcites →https://doi.org/10.1109/titb.2003.808506openalex-snapshot
Nonrigid image registration in shared-memory multiprocessor environments with application to brains, breasts, and bees
inferredcites →https://doi.org/10.1126/science.1102506openalex-snapshot
Regulated Fast Nucleocytoplasmic Shuttling Observed by Reversible Protein Highlighting
inferredcites →https://doi.org/10.1126/science.1260922openalex-snapshot
Labeling of active neural circuits in vivo with designed calcium integrators
inferredcites →https://doi.org/10.1126/science.3037702openalex-snapshot
Mapping Patterns of c- fos Expression in the Central Nervous System After Seizure
inferredcites →https://doi.org/10.1364/josab.13.000481openalex-snapshot
Measurement of two-photon excitation cross sections of molecular fluorophores with data from 690 to 1050 nm
inferredcites →https://doi.org/10.1364/oe.16.004029openalex-snapshot
Two-photon absorption standards in the 550-1600 nm excitation wavelength range
inferredcites →https://doi.org/10.1371/journal.pone.0077728openalex-snapshot
A Neuron-Based Screening Platform for Optimizing Genetically-Encoded Calcium Indicators
inferredcites →https://doi.org/10.1523/jneurosci.2601-12.2012openalex-snapshot
Optimization of a GCaMP Calcium Indicator for Neural Activity Imaging
inferredcites →https://doi.org/10.3389/fncir.2014.00037openalex-snapshot
A new era for functional labeling of neurons: activity-dependent promoters have come of age

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1016/j.biocel.2020.105761openalex-snapshot
Genetically encoded biosensors based on innovative scaffolds
inferred← citeshttps://doi.org/10.3389/fncir.2020.00022openalex-snapshot
The Photoconvertible Fluorescent Probe, CaMPARI, Labels Active Neurons in Freely-Moving Intact Adult Fruit Flies
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