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Deaminase associated single nucleotide variants in blood and saliva-derived exomes from healthy subjects

https://doi.org/10.1101/807073
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Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/cam4.825openalex-snapshot
Association between targeted somatic mutation (TSM) signatures and HGS‐OvCa progression
inferredcites →https://doi.org/10.1007/978-3-319-61510-3_4openalex-snapshot
Functional Analysis in Metagenomics Using MEGAN 6
inferredcites →https://doi.org/10.1007/978-3-642-37765-5_1openalex-snapshot
The APOBEC3 Family of Retroelement Restriction Factors
inferredcites →https://doi.org/10.1007/s00203-018-1505-3openalex-snapshot
Insights into the human oral microbiome
inferredcites →https://doi.org/10.1016/j.ab.2006.03.021openalex-snapshot
Evaluation of saliva as a source of human DNA for population and association studies
inferredcites →https://doi.org/10.1016/j.ajhg.2016.02.003openalex-snapshot
Extensive Hidden Genomic Mosaicism Revealed in Normal Tissue
inferredcites →https://doi.org/10.1016/j.cancergen.2013.05.016openalex-snapshot
The importance of codon context for understanding the Ig-like somatic hypermutation strand-biased patterns in TP53 mutations in breast cancer
inferredcites →https://doi.org/10.1016/j.cell.2017.01.002openalex-snapshot
Endogenous DNA Damage as a Source of Genomic Instability in Cancer
inferredcites →https://doi.org/10.1016/j.jmb.2004.01.046openalex-snapshot
Comparison of the Differential Context-dependence of DNA Deamination by APOBEC Enzymes: Correlation with Mutation Spectra in Vivo
inferredcites →https://doi.org/10.1016/j.mrfmmm.2018.03.008openalex-snapshot
APOBEC and ADAR deaminases may cause many single nucleotide polymorphisms curated in the OMIM database
inferredcites →https://doi.org/10.1016/j.semcdb.2011.10.004openalex-snapshot
Functions and regulation of the APOBEC family of proteins
inferredcites →https://doi.org/10.1016/j.tig.2018.04.003openalex-snapshot
Detecting Somatic Mutations in Normal Cells
inferredcites →https://doi.org/10.1021/acs.chemrev.6b00296openalex-snapshot
Functions and Malfunctions of Mammalian DNA-Cytosine Deaminases
inferredcites →https://doi.org/10.1037/0033-2909.86.2.420openalex-snapshot
Intraclass correlations: Uses in assessing rater reliability.
inferredcites →https://doi.org/10.1038/bjc.2017.133openalex-snapshot
Elevated APOBEC3B expression drives a kataegic-like mutation signature and replication stress-related therapeutic vulnerabilities in p53-defective cells
inferredcites →https://doi.org/10.1038/nature11881openalex-snapshot
APOBEC3B is an enzymatic source of mutation in breast cancer
inferredcites →https://doi.org/10.1038/nature19057openalex-snapshot
Analysis of protein-coding genetic variation in 60,706 humans
inferredcites →https://doi.org/10.1038/ng.2701openalex-snapshot
Evidence for APOBEC3B mutagenesis in multiple human cancers
inferredcites →https://doi.org/10.1038/ng.2702openalex-snapshot
An APOBEC cytidine deaminase mutagenesis pattern is widespread in human cancers
inferredcites →https://doi.org/10.1038/nmeth.3176openalex-snapshot
Fast and sensitive protein alignment using DIAMOND
inferredcites →https://doi.org/10.1038/nrc3816openalex-snapshot
Hypermutation in human cancer genomes: footprints and mechanisms
inferredcites →https://doi.org/10.1038/nrg.2016.145openalex-snapshot
Mosaicism in health and disease — clones picking up speed
inferredcites →https://doi.org/10.1038/nrg1455openalex-snapshot
Encoded evidence: DNA in forensic analysis
inferredcites →https://doi.org/10.1038/nri.2016.2openalex-snapshot
Mutations, kataegis and translocations in B cells: understanding AID promiscuous activity
inferredcites →https://doi.org/10.1038/s41592-018-0051-xopenalex-snapshot
Strelka2: fast and accurate calling of germline and somatic variants
inferredcites →https://doi.org/10.1038/srep12742openalex-snapshot
Performance comparison of four commercial human whole-exome capture platforms
inferredcites →https://doi.org/10.1038/srep17875openalex-snapshot
Systematic comparison of variant calling pipelines using gold standard personal exome variants
inferredcites →https://doi.org/10.1073/pnas.1720897115openalex-snapshot
Diversification of AID/APOBEC-like deaminases in metazoa: multiplicity of clades and widespread roles in immunity
inferredcites →https://doi.org/10.1093/annonc/mdy003openalex-snapshot
Perspective: APOBEC mutagenesis in drug resistance and immune escape in HIV and cancer evolution
inferredcites →https://doi.org/10.1093/bib/bbx049openalex-snapshot
Mutational signatures and mutable motifs in cancer genomes
inferredcites →https://doi.org/10.1093/bioinformatics/btw354openalex-snapshot
MultiQC: summarize analysis results for multiple tools and samples in a single report
inferredcites →https://doi.org/10.1093/carcin/bgr124openalex-snapshot
Adenosine-to-inosine RNA editing meets cancer
inferredcites →https://doi.org/10.1093/jncics/pky002openalex-snapshot
Mutation Signatures Including APOBEC in Cancer Cell Lines
inferredcites →https://doi.org/10.1093/nar/29.1.308openalex-snapshot
dbSNP: the NCBI database of genetic variation
inferredcites →https://doi.org/10.1093/nar/gkj144openalex-snapshot
The UCSC Genome Browser Database: update 2006
inferredcites →https://doi.org/10.1093/nar/gkx1098openalex-snapshot
Ensembl 2018
inferredcites →https://doi.org/10.1111/j.1469-185x.2011.00186.xopenalex-snapshot
ADARs: allies or enemies? The importance of A‐to‐I RNA editing in human disease: from cancer to HIV‐1
inferredcites →https://doi.org/10.1126/science.aaa6806openalex-snapshot
High burden and pervasive positive selection of somatic mutations in normal human skin
inferredcites →https://doi.org/10.1126/science.aao4426openalex-snapshot
Aging and neurodegeneration are associated with increased mutations in single human neurons
inferredcites →https://doi.org/10.1136/gutjnl-2012-304037openalex-snapshot
A disrupted RNA editing balance mediated by ADARs (Adenosine DeAminases that act on RNA) in human hepatocellular carcinoma
inferredcites →https://doi.org/10.1146/annurev-micro-090817-062307openalex-snapshot
Communication Between the Microbiota and Mammalian Immunity
inferredcites →https://doi.org/10.1158/0008-5472.can-13-1753openalex-snapshot
APOBEC3B Upregulation and Genomic Mutation Patterns in Serous Ovarian Carcinoma
inferredcites →https://doi.org/10.1158/0008-5472.can-16-2346openalex-snapshot
Precancer Atlas to Drive Precision Prevention Trials
inferredcites →https://doi.org/10.1158/1055-9965.epi-07-0611openalex-snapshot
Collection of Blood, Saliva, and Buccal Cell Samples in a Pilot Study on the Danish Nurse Cohort: Comparison of the Response Rate and Quality of Genomic DNA
inferredcites →https://doi.org/10.1158/1055-9965.epi-15-0205openalex-snapshot
The Impact of DNA Input Amount and DNA Source on the Performance of Whole-Exome Sequencing in Cancer Epidemiology
inferredcites →https://doi.org/10.1158/2159-8290.cd-15-0344openalex-snapshot
APOBEC Enzymes: Mutagenic Fuel for Cancer Evolution and Heterogeneity
inferredcites →https://doi.org/10.1186/1471-2164-15-262openalex-snapshot
Exome capture from saliva produces high quality genomic and metagenomic data
inferredcites →https://doi.org/10.1186/gb-2008-9-6-229openalex-snapshot
The AID/APOBEC family of nucleic acid mutators
inferredcites →https://doi.org/10.1186/gm490openalex-snapshot
Cancer mutation signatures, DNA damage mechanisms, and potential clinical implications
inferredcites →https://doi.org/10.1186/s13104-017-3110-yopenalex-snapshot
The utility of DNA extracted from saliva for genome-wide molecular research platforms
inferredcites →https://doi.org/10.1371/journal.pcbi.1004957openalex-snapshot
MEGAN Community Edition - Interactive Exploration and Analysis of Large-Scale Microbiome Sequencing Data
inferredcites →https://doi.org/10.1371/journal.pone.0169774openalex-snapshot
Examining Sources of Error in PCR by Single-Molecule Sequencing
inferredcites →https://doi.org/10.1371/journal.pone.0186175openalex-snapshot
Comprehensive benchmarking of SNV callers for highly admixed tumor data
inferredcites →https://doi.org/10.14806/ej.17.1.200openalex-snapshot
Cutadapt removes adapter sequences from high-throughput sequencing reads
inferredcites →https://doi.org/10.3389/fgene.2014.00016openalex-snapshot
The struggle to find reliable results in exome sequencing data: filtering out Mendelian errors
inferredcites →https://doi.org/10.3402/jom.v7.26094openalex-snapshot
The hidden ‘mycobacteriome’ of the human healthy oral cavity and upper respiratory tract
inferredcites →https://doi.org/10.4049/jimmunol.1400433openalex-snapshot
Binding of AID to DNA Does Not Correlate with Mutator Activity
inferredcites →https://doi.org/10.6084/m9.figshare.963153.v1openalex-snapshot
Aligning sequence reads, clone sequences and assembly con*gs with BWA-MEM
inferredcites →https://doi.org/10.7554/elife.00534openalex-snapshot
DNA deaminases induce break-associated mutation showers with implication of APOBEC3B and 3A in breast cancer kataegis
inferredcites →https://doi.org/10.7554/elife.27798openalex-snapshot
Rapid re-identification of human samples using portable DNA sequencing
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