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Conserved bacterial genomes from two geographically distinct peritidal stromatolite formations shed light on potential functional guilds

https://doi.org/10.1101/818625
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Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/978-1-4939-3369-3_13openalex-snapshot
MG-RAST, a Metagenomics Service for Analysis of Microbial Community Structure and Function
inferredcites →https://doi.org/10.1007/978-3-642-76884-2_34openalex-snapshot
The History and Significance of Stromatolites
inferredcites →https://doi.org/10.1007/s10534-011-9421-xopenalex-snapshot
Bacterial transport of sulfate, molybdate, and related oxyanions
inferredcites →https://doi.org/10.1016/0043-1354(94)00301-mopenalex-snapshot
Coprecipitation of phosphate with calcium carbonate in Lake Veluwe
inferredcites →https://doi.org/10.1016/0378-1119(93)90692-vopenalex-snapshot
Evidence for a fourteen-gene, phnC to phnP locus for phosphonate metabolism in Escherichia coli
inferredcites →https://doi.org/10.1016/b978-0-444-52019-7.50009-7openalex-snapshot
Microbial mats as bioreactors: populations, processes, and products
inferredcites →https://doi.org/10.1016/c2009-0-06348-xopenalex-snapshot
Geobiology: Objectives, Concepts, Perspectives
inferredcites →https://doi.org/10.1016/j.bioorg.2011.08.001openalex-snapshot
Mechanism for sulfur acquisition by the alkanesulfonate monooxygenase system
inferredcites →https://doi.org/10.1016/j.earscirev.2008.10.005openalex-snapshot
Processes of carbonate precipitation in modern microbial mats
inferredcites →https://doi.org/10.1016/j.jcis.2004.08.054openalex-snapshot
Adsorption and precipitation of an aminoalkylphosphonate onto calcite
inferredcites →https://doi.org/10.1016/j.jmarsys.2016.11.010openalex-snapshot
Peritidal stromatolites at the convergence of groundwater seepage and marine incursion: Patterns of salinity, temperature and nutrient variability
inferredcites →https://doi.org/10.1016/j.matchemphys.2017.01.060openalex-snapshot
The influence of ammonia and selected amines on the characteristics of calcium carbonate precipitated from calcium chloride solutions via carbonation
inferredcites →https://doi.org/10.1016/j.palaeo.2004.10.016openalex-snapshot
Microbial mats as bioreactors: populations, processes, and products
inferredcites →https://doi.org/10.1016/j.quascirev.2019.03.026openalex-snapshot
Peritidal stromatolites as indicators of stepping-stone freshwater resources on the Palaeo-Agulhas Plain landscape
inferredcites →https://doi.org/10.1016/j.scitotenv.2017.09.223openalex-snapshot
Organophosphonates: A review on environmental relevance, biodegradability and removal in wastewater treatment plants
inferredcites →https://doi.org/10.1016/j.sedgeo.2018.06.002openalex-snapshot
Hydrochemistry of peritidal stromatolite pools and associated freshwater inlets along the Eastern Cape coast, South Africa
inferredcites →https://doi.org/10.1016/j.sedgeo.2018.11.014openalex-snapshot
Potential photosynthetic impact on phosphate stromatolite formation after the Marinoan glaciation: Paleoceanographic implications
inferredcites →https://doi.org/10.1016/s1002-0160(08)60042-9openalex-snapshot
Phosphate-Solubilizing and -Mineralizing Abilities of Bacteria Isolated from Soils
inferredcites →https://doi.org/10.1038/35023158openalex-snapshot
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inferredcites →https://doi.org/10.1038/nbt.4229openalex-snapshot
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inferredcites →https://doi.org/10.1038/s41396-018-0208-8openalex-snapshot
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inferredcites →https://doi.org/10.1038/s41467-018-07641-9openalex-snapshot
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inferredcites →https://doi.org/10.1038/s41561-019-0371-1openalex-snapshot
Ammonium availability in the Late Archaean nitrogen cycle
inferredcites →https://doi.org/10.1038/s41587-020-0501-8openalex-snapshot
A complete domain-to-species taxonomy for Bacteria and Archaea
inferredcites →https://doi.org/10.1038/s41598-017-00896-0openalex-snapshot
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inferredcites →https://doi.org/10.1038/srep12601openalex-snapshot
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inferredcites →https://doi.org/10.1038/srep42614openalex-snapshot
Non-reliance of metazoans on stromatolite-forming microbial mats as a food resource
inferredcites →https://doi.org/10.1038/srep46160openalex-snapshot
Dynamics of archaea at fine spatial scales in Shark Bay mat microbiomes
inferredcites →https://doi.org/10.1046/j.1365-3091.2000.00327.xopenalex-snapshot
The role of endolithic cyanobacteria in the formation of lithified laminae in Bahamian stromatolites
inferredcites →https://doi.org/10.1073/pnas.1207491109openalex-snapshot
Sulfur isotopes of organic matter preserved in 3.45-billion-year-old stromatolites reveal microbial metabolism
inferredcites →https://doi.org/10.1080/01490451.2015.1118168openalex-snapshot
Biodiversity of Living, Non-marine, Thrombolites of Lake Clifton, Western Australia
inferredcites →https://doi.org/10.1089/ast.2016.1478openalex-snapshot
Nitrogen in Ancient Mud: A Biosignature?
inferredcites →https://doi.org/10.1089/cmb.2012.0021openalex-snapshot
SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
inferredcites →https://doi.org/10.1089/cmb.2018.0152openalex-snapshot
IonHammer: Homopolymer-Space Hamming Clustering for IonTorrent Read Error Correction
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Prokka: rapid prokaryotic genome annotation
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GTDB-Tk: a toolkit to classify genomes with the Genome Taxonomy Database
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KofamKOALA: KEGG Ortholog assignment based on profile HMM and adaptive score threshold
inferredcites →https://doi.org/10.1093/femsec/fiw212openalex-snapshot
Soil phoD and phoX alkaline phosphatase gene diversity responds to multiple environmental factors
inferredcites →https://doi.org/10.1093/nar/gkn201openalex-snapshot
NCBI BLAST: a better web interface
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Autometa: automated extraction of microbial genomes from individual shotgun metagenomes
inferredcites →https://doi.org/10.1098/rsos.171428openalex-snapshot
Grazer responses to variable macroalgal resource conditions facilitate habitat structuring
inferredcites →https://doi.org/10.1101/766709openalex-snapshot
Diversity of Archaea Domain in Cuatro Cienegas Basin: Archaean Domes
inferredcites →https://doi.org/10.1101/gr.186072.114openalex-snapshot
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
inferredcites →https://doi.org/10.1111/1462-2920.13094openalex-snapshot
Characterization of the stromatolite microbiome from L ittle D arby I sland, T he B ahamas using predictive and whole shotgun metagenomic analysis
inferredcites →https://doi.org/10.1111/1462-2920.13116openalex-snapshot
Environmental influences on living marine stromatolites: insights from benthic microalgal communities
inferredcites →https://doi.org/10.1111/gbi.12281openalex-snapshot
Formation of stromatolite lamina at the interface of oxygenic–anoxygenic photosynthesis
inferredcites →https://doi.org/10.1111/j.1365-3091.2004.00649.xopenalex-snapshot
Microbe–mineral interactions: early carbonate precipitation in a hypersaline lake (Eleuthera Island, Bahamas)
inferredcites →https://doi.org/10.1111/j.1462-2920.2009.01885.xopenalex-snapshot
Genetic and biochemical properties of an alkaline phosphatase PhoX family protein found in many bacteria
inferredcites →https://doi.org/10.1111/j.1472-4669.2011.00271.xopenalex-snapshot
Extreme 15N‐enrichments in 2.72‐Gyr‐old sediments: evidence for a turning point in the nitrogen cycle
inferredcites →https://doi.org/10.1111/j.1472-4669.2012.00342.xopenalex-snapshot
Inside the alkalinity engine: the role of electron donors in the organomineralization potential of sulfate‐reducing bacteria
inferredcites →https://doi.org/10.1111/sed.12214openalex-snapshot
Neoproterozoic peritidal phosphorite from the Sete Lagoas Formation (Brazil) and the Precambrian phosphorus cycle
inferredcites →https://doi.org/10.1126/science.aad3558openalex-snapshot
A protein trisulfide couples dissimilatory sulfate reduction to energy conservation
inferredcites →https://doi.org/10.1126/science.aal3794openalex-snapshot
On the origins of oxygenic photosynthesis and aerobic respiration in Cyanobacteria
inferredcites →https://doi.org/10.1128/aem.01541-09openalex-snapshot
Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
inferredcites →https://doi.org/10.1128/aem.01823-15openalex-snapshot
phoD Alkaline Phosphatase Gene Diversity in Soil
inferredcites →https://doi.org/10.1128/aem.69.4.2182-2193.2003openalex-snapshot
Conservation of Ornamental Stone byMyxococcus xanthus-Induced Carbonate Biomineralization
inferredcites →https://doi.org/10.1128/jb.181.21.6573-6584.1999openalex-snapshot
Prokaryotic Nitrate Reduction: Molecular Properties and Functional Distinction among Bacterial Nitrate Reductases
inferredcites →https://doi.org/10.1128/jb.182.10.2869-2878.2000openalex-snapshot
ThessuLocus Plays a Key Role in Organosulfur Metabolism inPseudomonas putidaS-313
inferredcites →https://doi.org/10.1128/mspheredirect.00073-17openalex-snapshot
OptiClust, an Improved Method for Assigning Amplicon-Based Sequence Data to Operational Taxonomic Units
inferredcites →https://doi.org/10.1130/0091-7613(2000)028<0919:moosrc>2.3.co;2openalex-snapshot
Microscale observations of sulfate reduction: Correlation of microbial activity with lithified micritic laminae in modern marine stromatolites
inferredcites →https://doi.org/10.1146/annurev.micro.61.080706.093357openalex-snapshot
Microbial Metabolism of Reduced Phosphorus Compounds
inferredcites →https://doi.org/10.1186/1471-2105-11-119openalex-snapshot
Prodigal: prokaryotic gene recognition and translation initiation site identification
inferredcites →https://doi.org/10.1186/s12866-019-1445-3openalex-snapshot
Phosphate uptake by the phosphonate transport system PhnCDE
inferredcites →https://doi.org/10.1186/s13568-019-0773-xopenalex-snapshot
Enhanced calcium carbonate-biofilm complex formation by alkali-generating Lysinibacillus boronitolerans YS11 and alkaliphilic Bacillus sp. AK13
inferredcites →https://doi.org/10.1306/d4267d84-2b26-11d7-8648000102c1865dopenalex-snapshot
Upper Proterozoic carbonate stratigraphy, diagenesis, and stromatolitic phosphorite formation, Irece Basin, Bahia, Brazil
inferredcites →https://doi.org/10.1371/journal.pone.0038229openalex-snapshot
Metagenomic and Metabolic Profiling of Nonlithifying and Lithifying Stromatolitic Mats of Highborne Cay, The Bahamas
inferredcites →https://doi.org/10.1371/journal.pone.0141063openalex-snapshot
Entrapped Sediments as a Source of Phosphorus in Epilithic Cyanobacterial Proliferations in Low Nutrient Rivers
inferredcites →https://doi.org/10.15517/rbt.v64i3.18806openalex-snapshot
Habitat conditions drive phylogenetic structure of dominant bacterial phyla of microbialite communities from different locations in Mexico
inferredcites →https://doi.org/10.1590/s1517-838246220140533openalex-snapshot
Biomineralization processes of calcite induced by bacteria isolated from marine sediments
inferredcites →https://doi.org/10.1590/sajs.2014/20130293openalex-snapshot
Antibacterial, antioxidant activities and cytotoxicity of plants against Propionibacterium acnes
inferredcites →https://doi.org/10.1590/sajs.2014/20140011openalex-snapshot
Tufa stromatolite ecosystems on the South African south coast
inferredcites →https://doi.org/10.2110/jsr.2013.9openalex-snapshot
Phosphate-Related Artifacts In Carbonate Mineralization Experiments
inferredcites →https://doi.org/10.3389/feart.2015.00084openalex-snapshot
Calcium-Phosphate Biomineralization Induced by Alkaline Phosphatase Activity in Escherichia coli: Localization, Kinetics, and Potential Signatures in the Fossil Record
inferredcites →https://doi.org/10.3389/fmicb.2015.01531openalex-snapshot
Metagenomic Analysis Suggests Modern Freshwater Microbialites Harbor a Distinct Core Microbial Community
inferredcites →https://doi.org/10.3389/fmicb.2016.01064openalex-snapshot
Characterization of Microbial Mat Microbiomes in the Modern Thrombolite Ecosystem of Lake Clifton, Western Australia Using Shotgun Metagenomics
inferredcites →https://doi.org/10.3389/fmicb.2016.01784openalex-snapshot
A Proposal for Formation of Archaean Stromatolites before the Advent of Oxygenic Photosynthesis
inferredcites →https://doi.org/10.3389/fmicb.2018.01359openalex-snapshot
Comparative Metagenomics Provides Insight Into the Ecosystem Functioning of the Shark Bay Stromatolites, Western Australia
inferredcites →https://doi.org/10.3389/fmicb.2019.01407openalex-snapshot
Predominance of Cand. Patescibacteria in Groundwater Is Caused by Their Preferential Mobilization From Soils and Flourishing Under Oligotrophic Conditions
inferredcites →https://doi.org/10.3390/min9070409openalex-snapshot
Carbonate Precipitation in Mixed Cyanobacterial Biofilms Forming Freshwater Microbial Tufa
inferredcites →https://doi.org/10.3897/rio.5.e36178openalex-snapshot
A fast alignment-free bioinformatics procedure to infer accurate distance-based phylogenetic trees from genome assemblies
inferredcites →https://doi.org/10.4314/wsa.v37i3.68489openalex-snapshot
Insights into the bacterial diversity in a freshwater-deprived permanently open Eastern Cape estuary, using 16S rRNA pyrosequencing analysis
inferredcites →https://doi.org/10.5194/bg-15-2189-2018openalex-snapshot
The extant shore platform stromatolite (SPS) facies association: a glimpse into the Archean?
inferredcites →https://doi.org/10.7717/peerj.2584openalex-snapshot
VSEARCH: a versatile open source tool for metagenomics

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Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1016/j.earscirev.2020.103364openalex-snapshot
Modern supratidal microbialites fed by groundwater: functional drivers, value and trajectories
inferred← citeshttps://doi.org/10.1101/2021.08.23.457424openalex-snapshot
The Chloroflexi supergroup is metabolically diverse and representatives have novel genes for non-photosynthesis based CO 2 fixation
inferred← citeshttps://doi.org/10.1111/gbi.12415openalex-snapshot
Living phosphatic stromatolites in a low‐phosphorus environment: Implications for the use of phosphorus as a proxy for phosphate levels in paleo‐systems
inferred← citeshttps://doi.org/10.1111/gbi.12456openalex-snapshot
Metazoan activity facilitates passive sediment trapping in modern supratidal microbialites: Revealed using µ‐CT‐scanning and microscopy
inferred← citeshttps://doi.org/10.1371/journal.pone.0246656openalex-snapshot
Carbon fixation and rhodopsin systems in microbial mats from hypersaline lakes Brava and Tebenquiche, Salar de Atacama, Chile
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