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The TARANI/ UBIQUITIN SPECIFIC PROTEASE 14 destabilizes the AUX/IAA transcriptional repressors and regulates auxin response in Arabidopsis thaliana

https://doi.org/10.1101/850826
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CIN‐TCP transcription factors: Transiting cell proliferation in plants
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Ubiquitin-Specific Proteases from Arabidopsis thaliana: Cloning of AtUBP5 and Analysis of Substrate Specificity of AtUBP3, AtUBP4, and AtUBP5 Using Escherichia coli in Vivo and in Vitro Assays
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ThePS-IAA4/5-like Family of Early Auxin-inducible mRNAs inArabidopsis thaliana
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Regulation of protein homeostasis in neurodegenerative diseases: the role of coding and non-coding genes
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The Ubiquitin Binding Domain ZnF UBP Recognizes the C-Terminal Diglycine Motif of Unanchored Ubiquitin
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Auxin: A major regulator of organogenesis
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Arabidopsis PLETHORA Transcription Factors Control Phyllotaxis
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Control of Organ Size in Plants
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Plant Development Is Regulated by a Family of Auxin Receptor F Box Proteins
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Auxin signaling and regulated protein degradation
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Leaf size control: complex coordination of cell division and expansion
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Lateral root development in Arabidopsis: fifty shades of auxin
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An Auxin-Dependent Distal Organizer of Pattern and Polarity in the Arabidopsis Root
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Proteasome inhibitors: from research tools to drug candidates
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Roles and activities of Aux/IAA proteins in Arabidopsis
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Auxin Signaling
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Metabolism of the polyubiquitin degradation signal: structure, mechanism, and role of isopeptidase T
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Vascular continuity, cell axialisation and auxin
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Targeted destabilization of HY5 during light-regulated development of Arabidopsis
inferredcites →https://doi.org/10.1038/35104500openalex-snapshot
Auxin regulates SCFTIR1-dependent degradation of AUX/IAA proteins
inferredcites →https://doi.org/10.1038/nature03184openalex-snapshot
The PIN auxin efflux facilitator network controls growth and patterning in Arabidopsis roots
inferredcites →https://doi.org/10.1038/nature05864openalex-snapshot
Control of DNA methylation and heterochromatic silencing by histone H2B deubiquitination
inferredcites →https://doi.org/10.1038/nature08836openalex-snapshot
MONOPTEROS controls embryonic root initiation by regulating a mobile transcription factor
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A novel sensor to map auxin response and distribution at high spatio-temporal resolution
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PLETHORA gradient formation mechanism separates auxin responses
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Pins for spines
inferredcites →https://doi.org/10.1038/ncb1316openalex-snapshot
Root gravitropism requires lateral root cap and epidermal cells for transport and response to a mobile auxin signal
inferredcites →https://doi.org/10.1038/ncb1754openalex-snapshot
The auxin influx carrier LAX3 promotes lateral root emergence
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Breaking the chains: structure and function of the deubiquitinases
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Lateral root formation is blocked by a gain‐of‐function mutation in the SOLITARY‐ROOT/IAA14 gene of Arabidopsis
inferredcites →https://doi.org/10.1046/j.1365-313x.1995.8040505.xopenalex-snapshot
Morphogenesis in pinoid mutants of Arabidopsis thaliana
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Mutations in the AXR3 gene of Arabidopsis result in altered auxin response including ectopic expression from the SAUR‐AC1 promoter
inferredcites →https://doi.org/10.1046/j.1365-313x.1998.00163.xopenalex-snapshot
Sur2 mutations of Arabidopsis thaliana define a new locus involved in the control of auxin homeostasis
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Floral dip: a simplified method for Agrobacterium ‐mediated transformation of Arabidopsis thaliana
inferredcites →https://doi.org/10.1046/j.1365-313x.2001.01106.xopenalex-snapshot
The ubiquitin‐specific protease UBP14 is essential for early embryo development in Arabidopsis thaliana
inferredcites →https://doi.org/10.1073/pnas.1210807110openalex-snapshot
Lateral root morphogenesis is dependent on the mechanical properties of the overlaying tissues
inferredcites →https://doi.org/10.1073/pnas.1714177115openalex-snapshot
Regulation of the stability of RGF1 receptor by the ubiquitin-specific proteases UBP12/UBP13 is critical for root meristem maintenance
inferredcites →https://doi.org/10.1074/jbc.272.38.23712openalex-snapshot
Inhibition of the 26 S Proteasome by Polyubiquitin Chains Synthesized to Have Defined Lengths
inferredcites →https://doi.org/10.1074/jbc.m112.419838openalex-snapshot
The Ubiquitin-associated (UBA) 1 Domain of Schizosaccharomyces pombe Rhp23 Is Essential for the Recognition of Ubiquitin-proteasome System Substrates Both in Vitro and in Vivo
inferredcites →https://doi.org/10.1074/jbc.m805871200openalex-snapshot
Suppression of the Deubiquitinating Enzyme USP5 Causes the Accumulation of Unanchored Polyubiquitin and the Activation of p53
inferredcites →https://doi.org/10.1074/jbc.m809069200openalex-snapshot
COP9 Signalosome- and 26S Proteasome-dependent Regulation of SCFTIR1 Accumulation in Arabidopsis
inferredcites →https://doi.org/10.1093/aob/mct067openalex-snapshot
Jasmonates: biosynthesis, perception, signal transduction and action in plant stress response, growth and development. An update to the 2007 review in Annals of Botany
inferredcites →https://doi.org/10.1093/emboj/16.16.4826openalex-snapshot
In vivo disassembly of free polyubiquitin chains by yeast Ubp14 modulates rates of protein degradation by the proteasome
inferredcites →https://doi.org/10.1093/emboj/19.1.94openalex-snapshot
Recognition of the polyubiquitin proteolytic signal
inferredcites →https://doi.org/10.1093/jxb/erv015openalex-snapshot
The tarani mutation alters surface curvature in Arabidopsis leaves by perturbing the patterns of surface expansion and cell division
inferredcites →https://doi.org/10.1093/pcp/pcn079openalex-snapshot
Domain II Mutations in CRANE/IAA18 Suppress Lateral Root Formation and Affect Shoot Development in Arabidopsis thaliana
inferredcites →https://doi.org/10.1101/gad.12.2.198openalex-snapshot
The TIR1 protein of Arabidopsis functions in auxin response and is related to human SKP2 and yeast Grr1p
inferredcites →https://doi.org/10.1101/gad.13.13.1678openalex-snapshot
Identification of an SCF ubiquitin-ligase complex required for auxin response in Arabidopsis thaliana
inferredcites →https://doi.org/10.1101/gad.229402openalex-snapshot
The Arabidopsis BODENLOS gene encodes an auxin response protein inhibiting MONOPTEROS-mediated embryo patterning
inferredcites →https://doi.org/10.1101/gad.237302openalex-snapshot
The Arabidopsis HOBBIT gene encodes a CDC27 homolog that links the plant cell cycle to progression of cell differentiation
inferredcites →https://doi.org/10.1104/pp.010911openalex-snapshot
Diversity of TITAN Functions in Arabidopsis Seed Development
inferredcites →https://doi.org/10.1104/pp.013623openalex-snapshot
Auxin Signaling in Arabidopsis Leaf Vascular Development
inferredcites →https://doi.org/10.1104/pp.106.095323openalex-snapshot
The Ubiquitin-Specific Protease Subfamily UBP3/UBP4 Is Essential for Pollen Development and Transmission in Arabidopsis
inferredcites →https://doi.org/10.1104/pp.107.104935openalex-snapshot
yucca6 , a Dominant Mutation in Arabidopsis, Affects Auxin Accumulation and Auxin-Related Phenotypes
inferredcites →https://doi.org/10.1104/pp.121.4.1179openalex-snapshot
Auxin Is Required for Leaf Vein Pattern in Arabidopsis
inferredcites →https://doi.org/10.1104/pp.123.2.563openalex-snapshot
AXR2 Encodes a Member of the Aux/IAA Protein Family
inferredcites →https://doi.org/10.1104/pp.124.4.1828openalex-snapshot
The Ubiquitin-Specific Protease Family from Arabidopsis.AtUBP1 and 2 Are Required for the Resistance to the Amino Acid Analog Canavanine
inferredcites →https://doi.org/10.1104/pp.17.00765openalex-snapshot
Auxin Signaling
inferredcites →https://doi.org/10.1105/tpc.009217openalex-snapshot
The Pleiotropic Role of the 26S Proteasome Subunit RPN10 in Arabidopsis Growth and Development Supports a Substrate-Specific Function in Abscisic Acid Signaling
inferredcites →https://doi.org/10.1105/tpc.010354openalex-snapshot
AUX1 Promotes Lateral Root Formation by Facilitating Indole-3-Acetic Acid Distribution between Sink and Source Tissues in the Arabidopsis Seedling
inferredcites →https://doi.org/10.1105/tpc.010381openalex-snapshot
Cytokinin Growth Responses in Arabidopsis Involve the 26S Proteasome Subunit RPN12
inferredcites →https://doi.org/10.1105/tpc.017384openalex-snapshot
Aux/IAA Proteins Contain a Potent Transcriptional Repression Domain
inferredcites →https://doi.org/10.1105/tpc.018630openalex-snapshot
MASSUGU2 Encodes Aux/IAA19, an Auxin-Regulated Protein That Functions Together with the Transcriptional Activator NPH4/ARF7 to Regulate Differential Growth Responses of Hypocotyl and Formation of Lateral Roots in Arabidopsis thaliana
inferredcites →https://doi.org/10.1105/tpc.104.024737openalex-snapshot
Structure-Function Analysis of the Presumptive Arabidopsis Auxin Permease AUX1[W]
inferredcites →https://doi.org/10.1105/tpc.104.028316openalex-snapshot
Functional Genomic Analysis of the AUXIN RESPONSE FACTOR Gene Family Members in Arabidopsis thaliana : Unique and Overlapping Functions of ARF7 and ARF19
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Functional Genomic Analysis of the AUXIN/INDOLE-3-ACETIC ACID Gene Family Members in Arabidopsis thaliana [W]
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TheTORNADO1andTORNADO2Genes Function in Several Patterning Processes during Early Leaf Development inArabidopsis thaliana
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ARF7 and ARF19 Regulate Lateral Root Formation via Direct Activation of LBD/ASL Genes in Arabidopsis
inferredcites →https://doi.org/10.1105/tpc.107.053009openalex-snapshot
Auxin Synthesized by the YUCCA Flavin Monooxygenases Is Essential for Embryogenesis and Leaf Formation in Arabidopsis
inferredcites →https://doi.org/10.1105/tpc.111.089482openalex-snapshot
The RPT2 Subunit of the 26S Proteasome Directs Complex Assembly, Histone Dynamics, and Gametophyte and Sporophyte Development inArabidopsis
inferredcites →https://doi.org/10.1105/tpc.112.108613openalex-snapshot
Advanced Proteomic Analyses Yield a Deep Catalog of Ubiquitylation Targets in Arabidopsis
inferredcites →https://doi.org/10.1105/tpc.13.4.843openalex-snapshot
Auxin Transport Promotes Arabidopsis Lateral Root Initiation
inferredcites →https://doi.org/10.1105/tpc.16.00007openalex-snapshot
UBIQUITIN-SPECIFIC PROTEASE 14 interacts with ULTRAVIOLET-B INSENSITIVE 4 to regulate endoreduplication and cell and organ growth in Arabidopsis
inferredcites →https://doi.org/10.1105/tpc.17.00216openalex-snapshot
The Deubiquitinating Enzymes UBP12 and UBP13 Positively Regulate MYC2 Levels in Jasmonate Responses
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Superroot, a recessive mutation in Arabidopsis, confers auxin overproduction.
inferredcites →https://doi.org/10.1105/tpc.9.11.1963openalex-snapshot
Aux/IAA proteins repress expression of reporter genes containing natural and highly active synthetic auxin response elements.
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Dynamics of MONOPTEROS and PIN‐FORMED1 expression during leaf vein pattern formation in Arabidopsis thaliana
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Functional characterization of the Arabidopsis ubiquitin‐specific protease gene family reveals specific role and redundancy of individual members in development
inferredcites →https://doi.org/10.1111/j.1365-313x.2010.04112.xopenalex-snapshot
The ubiquitin‐proteasome system regulates plant hormone signaling
inferredcites →https://doi.org/10.1111/j.1365-313x.2010.04365.xopenalex-snapshot
Auxin-induced inhibition of lateral root initiation contributes to root system shaping in Arabidopsis thaliana
inferredcites →https://doi.org/10.1111/j.1469-8137.2011.03996.xopenalex-snapshot
Lateral root initiation: one step at a time
inferredcites →https://doi.org/10.1111/tpj.12644openalex-snapshot
UBC 13, an E2 enzyme for L ys63‐linked ubiquitination, functions in root development by affecting auxin signaling and Aux/ IAA protein stability
inferredcites →https://doi.org/10.1111/tpj.13158openalex-snapshot
The anaphase‐promoting complex initiates zygote division in Arabidopsis through degradation of cyclin B1
inferredcites →https://doi.org/10.1126/science.3544217openalex-snapshot
Splicing of Messenger RNA Precursors
inferredcites →https://doi.org/10.1146/annurev-biochem-061516-044916openalex-snapshot
Mechanisms of Deubiquitinase Specificity and Regulation
inferredcites →https://doi.org/10.1146/annurev.arplant.55.031903.141801openalex-snapshot
THE UBIQUITIN 26S PROTEASOME PROTEOLYTIC PATHWAY
inferredcites →https://doi.org/10.1146/annurev.bi.61.070192.003553openalex-snapshot
THE UBIQUITIN SYSTEM FOR PROTEIN DEGRADATION
inferredcites →https://doi.org/10.1186/1471-2229-8-1openalex-snapshot
Bioinformatic analysis of the CLE signaling peptide family
inferredcites →https://doi.org/10.1186/1471-2229-8-41openalex-snapshot
The IBR5 phosphatase promotes Arabidopsis auxin responses through a novel mechanism distinct from TIR1-mediated repressor degradation
inferredcites →https://doi.org/10.1186/gb-2009-10-12-249openalex-snapshot
The PIN-FORMED (PIN) protein family of auxin transporters
inferredcites →https://doi.org/10.1199/tab.0174openalex-snapshot
The Ubiquitination Machinery of the Ubiquitin System
inferredcites →https://doi.org/10.1242/dev.02194openalex-snapshot
The AUXIN RESPONSE FACTOR 2 gene of Arabidopsis links auxin signalling, cell division, and the size of seeds and other organs
inferredcites →https://doi.org/10.1242/dev.025932openalex-snapshot
A gain-of-function mutation inIAA18altersArabidopsisembryonic apical patterning
inferredcites →https://doi.org/10.1242/dev.087650openalex-snapshot
Gibberellin signaling in plants
inferredcites →https://doi.org/10.1242/dev.111500openalex-snapshot
Building a plant: cell fate specification in the early Arabidopsis embryo
inferredcites →https://doi.org/10.1242/dev.120.9.2475openalex-snapshot
Embryonic origin of the Arabidopsis primary root and root meristem initials
inferredcites →https://doi.org/10.1242/dev.126.4.711openalex-snapshot
Control of auxin-regulated root development by the Arabidopsis thaliana SHY2/IAA3 gene
inferredcites →https://doi.org/10.1242/dev.126.7.1387openalex-snapshot
The auxin-insensitive bodenlos mutation affects primary root formation and apical-basal patterning in the Arabidopsis embryo
inferredcites →https://doi.org/10.1242/dev.127.1.23openalex-snapshot
The axr6 mutants of Arabidopsis thaliana define a gene involved in auxin response and early development
inferredcites →https://doi.org/10.1534/genetics.108.091736openalex-snapshot
UBIQUITIN-SPECIFIC PROTEASE 26 Is Required for Seed Development and the Repression of PHERES1 in Arabidopsis
inferredcites →https://doi.org/10.3389/fpls.2011.00093openalex-snapshot
Embryonic development in Arabidopsis thaliana: from the zygote division to the shoot meristem
inferredcites →https://doi.org/10.3389/fpls.2011.00098openalex-snapshot
Evidence for a DNA-Based Mechanism of Intron-Mediated Enhancement
inferredcites →https://doi.org/10.3389/fpls.2014.00056openalex-snapshot
Deubiquitylating enzymes and their emerging role in plant biology
inferredcites →https://doi.org/10.3389/fpls.2014.00692openalex-snapshot
Strategies for transferring resistance into wheat: from wide crosses to GM cassettes
inferredcites →https://doi.org/10.3389/fpls.2017.01569openalex-snapshot
Gaining Insight into Exclusive and Common Transcriptomic Features Linked with Biotic Stress Responses in Malus
inferredcites →https://doi.org/10.3389/fpls.2017.02274openalex-snapshot
Plant Deubiquitinases and Their Role in the Control of Gene Expression Through Modification of Histones
inferredcites →https://doi.org/10.3390/plants3020251openalex-snapshot
LEAFY and Polar Auxin Transport Coordinately Regulate Arabidopsis Flower Development
inferredcites →https://doi.org/10.5483/bmbrep.2014.47.9.128openalex-snapshot
Cellular ubiquitin pool dynamics and homeostasis
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