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Topology-driven protein-protein interaction network analysis detects genetic sub-networks regulating reproductive capacity
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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Genetic dissection of a stem cell niche: The case of the Drosophila ovary
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The development of the female Drosophila reproductive system
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Functional and topological characterization of protein interaction networks
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Drosophila Ovary Morphogenesis: Analysis of Terminal Filament Formation and Identification of a Gene Required for This Process
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Control of the adult reproductive potential by preimaginal thermal conditions
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Terminal filament cell organization in the larval ovary of Drosophila melanogaster: ultrastructural observations and pattern of divisions
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Parallel alterations in the timing of ovarian Ecdysone Receptor and Ultraspiracle expression characterize the independent evolution of larval reproduction in two species of gall midges (Diptera: Cecidomyiidae)
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The ecdysone receptor and ultraspiracle regulate the timing and progression of ovarian morphogenesis during Drosophila metamorphosis
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Steroid Hormones and the Physiological Regulation of Tissue-Resident Stem Cells: Lessons from the Drosophila Ovary
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A Mammalian Organelle Map by Protein Correlation Profiling
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Premetazoan Origin of the Hippo Signaling Pathway
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Reproductive Capacity Evolves in Response to Ecology through Common Changes in Cell Number in Hawaiian Drosophila
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Organizing stem cell units in the Drosophila ovary
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Network-Based Disease Module Discovery by a Novel Seed Connector Algorithm with Pathobiological Implications
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Ligand-independent activation of the Hedgehog pathway displays non-cell autonomous proliferation during eye development in Drosophila
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Rho GTPases and actin dynamics in membrane protrusions and vesicle trafficking
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Bunched sets a boundary for Notch signaling to pattern anterior eggshell structures during Drosophila oogenesis
inferredcites →https://doi.org/10.1016/j.ydbio.2011.12.017openalex-snapshot
The roles of cell size and cell number in determining ovariole number in Drosophila
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Convergent evolution of a reproductive trait through distinct developmental mechanisms in Drosophila
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The Rho GTPase and a Putative RhoGEF Mediate a Signaling Pathway for the Cell Shape Changes in Drosophila Gastrulation
inferredcites →https://doi.org/10.1016/s0378-1119(99)00351-0openalex-snapshot
Identification and characterization of Drosophila homolog of Rho-kinase
inferredcites →https://doi.org/10.1017/s0016672300004894openalex-snapshot
Quantitative trait locus mapping of fitness-related traits in Drosophila melanogaster
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Evolution of a lesser fitness trait: egg production in the specialist Drosophila sechellia
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Similarities and differences in latitudinal adaptation of two Drosophila sibling species
inferredcites →https://doi.org/10.1038/30918openalex-snapshot
Collective dynamics of ‘small-world’ networks
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From molecular to modular cell biology
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Cofilin/ADF is required for cell motility during Drosophila ovary development and oogenesis
inferredcites →https://doi.org/10.1038/35075138openalex-snapshot
Lethality and centrality in protein networks
inferredcites →https://doi.org/10.1038/cr.2011.63openalex-snapshot
Molecular mechanism of size control in development and human diseases
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Comparative assessment of large-scale data sets of protein–protein interactions
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Network-based in silico drug efficacy screening
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Network biology: understanding the cell's functional organization
inferredcites →https://doi.org/10.1039/c3mb70187eopenalex-snapshot
Logical modelling of Drosophila signalling pathways
inferredcites →https://doi.org/10.1051/gse:19940102openalex-snapshot
Phenotypic and genetic variability of morphometrical traits in natural populations of Drosophila melanogaster and D simulans. II. Within-population variability
inferredcites →https://doi.org/10.1073/pnas.0809144106openalex-snapshot
Insulin levels control female germline stem cell maintenance via the niche in Drosophila
inferredcites →https://doi.org/10.1073/pnas.1400520111openalex-snapshot
Spatiotemporal control of epithelial remodeling by regulated myosin phosphorylation
inferredcites →https://doi.org/10.1073/pnas.222549199openalex-snapshot
Combining mapping and arraying: An approach to candidate gene identification
inferredcites →https://doi.org/10.1073/pnas.88.5.1835openalex-snapshot
Host-plant specialization in the Drosophila melanogaster species complex: a physiological, behavioral, and genetical analysis.
inferredcites →https://doi.org/10.1083/jcb.200406024openalex-snapshot
Adherens junction-dependent and -independent steps in the establishment of epithelial cell polarity in Drosophila
inferredcites →https://doi.org/10.1083/jcb.201209129openalex-snapshot
Misshapen decreases integrin levels to promote epithelial motility and planar polarity in Drosophila
inferredcites →https://doi.org/10.1083/jcb.201610063openalex-snapshot
Hedgehog signaling establishes precursors for germline stem cell niches by regulating cell adhesion
inferredcites →https://doi.org/10.1086/282700openalex-snapshot
Studies of Oogenesis in Natural Populations of Drosophilidae. I. Relation of Ovarian Development and Ecological Habitats of the Hawaiian Species
inferredcites →https://doi.org/10.1091/mbc.9.12.3273openalex-snapshot
Comprehensive Identification of Cell Cycle–regulated Genes of the YeastSaccharomyces cerevisiaeby Microarray Hybridization
inferredcites →https://doi.org/10.1093/bib/bbm038openalex-snapshot
Current progress in network research: toward reference networks for key model organisms
inferredcites →https://doi.org/10.1093/bioinformatics/bth402openalex-snapshot
Conserved network motifs allow protein–protein interaction prediction
inferredcites →https://doi.org/10.1093/bioinformatics/bti688openalex-snapshot
Interactome-transcriptome analysis reveals the high centrality of genes differentially expressed in lung cancer tissues
inferredcites →https://doi.org/10.1093/bioinformatics/btl014openalex-snapshot
Predicting interactions in protein networks by completing defective cliques
inferredcites →https://doi.org/10.1093/genetics/165.2.601openalex-snapshot
Mutations in Eukaryotic Release Factors 1 and 3 Act as General Nonsense Suppressors in Drosophila
inferredcites →https://doi.org/10.1093/molbev/msi072openalex-snapshot
Comparative Genomics of Centrality and Essentiality in Three Eukaryotic Protein-Interaction Networks
inferredcites →https://doi.org/10.1093/molbev/msr065openalex-snapshot
The Evolutionary History of YAP and the Hippo/YAP Pathway
inferredcites →https://doi.org/10.1093/nar/gkp896openalex-snapshot
KEGG for representation and analysis of molecular networks involving diseases and drugs
inferredcites →https://doi.org/10.1093/nar/gkw1016openalex-snapshot
FlyBase at 25: looking to the future
inferredcites →https://doi.org/10.1101/gad.5.12a.2153openalex-snapshot
polo encodes a protein kinase homolog required for mitosis in Drosophila.
inferredcites →https://doi.org/10.1101/gr.205301openalex-snapshot
Identification of Potential Interaction Networks Using Sequence-Based Searches for Conserved Protein-Protein Interactions or “Interologs”
inferredcites →https://doi.org/10.1101/gr.205602openalex-snapshot
Relating Whole-Genome Expression Data with Protein-Protein Interactions
inferredcites →https://doi.org/10.1103/revmodphys.74.47openalex-snapshot
Statistical mechanics of complex networks
inferredcites →https://doi.org/10.1111/evo.12221openalex-snapshot
VARIATION IN THERMAL PERFORMANCE AND REACTION NORMS AMONG POPULATIONS OF DROSOPHILA MELANOGASTER
inferredcites →https://doi.org/10.1111/j.0014-3820.2000.tb00708.xopenalex-snapshot
DIFFERENT MECHANISMS UNDERLIE PHENOTYPIC PLASTICITY AND INTERSPECIFIC VARIATION FOR A REPRODUCTIVE CHARACTER IN DROSOPHILIDS (INSECTA: DIPTERA)
inferredcites →https://doi.org/10.1111/j.1420-9101.2008.01649.xopenalex-snapshot
Egg size, embryonic development time and ovoviviparity in Drosophila species
inferredcites →https://doi.org/10.1111/j.1558-5646.1996.tb03621.xopenalex-snapshot
THERMAL EVOLUTION OF EGG SIZE INDROSOPHILA MELANOGASTER
inferredcites →https://doi.org/10.1111/j.1558-5646.1997.tb03963.xopenalex-snapshot
QUANTITATIVE GENETICS OF OVARIOLE NUMBER INDROSOPHILA MELANOGASTER.I. SEGREGATING VARIATION AND FITNESS
inferredcites →https://doi.org/10.1111/jeb.12155openalex-snapshot
Reproductive and post‐reproductive life history of wild‐caught D rosophila melanogasterunder laboratory conditions
inferredcites →https://doi.org/10.1126/science.1073374openalex-snapshot
Hierarchical Organization of Modularity in Metabolic Networks
inferredcites →https://doi.org/10.1126/science.1090289openalex-snapshot
A Protein Interaction Map of Drosophila melanogaster
inferredcites →https://doi.org/10.1126/science.1111410openalex-snapshot
Direct Control of Germline Stem Cell Division and Cyst Growth by Neural Insulin in Drosophila
inferredcites →https://doi.org/10.1126/science.1152662openalex-snapshot
Design Logic of a Cannabinoid Receptor Signaling Network That Triggers Neurite Outgrowth
inferredcites →https://doi.org/10.1126/science.1158684openalex-snapshot
High-Quality Binary Protein Interaction Map of the Yeast Interactome Network
inferredcites →https://doi.org/10.1126/science.286.5439.509openalex-snapshot
Emergence of Scaling in Random Networks
inferredcites →https://doi.org/10.1126/scisignal.2000350openalex-snapshot
Integration of Proteomic, Transcriptional, and Interactome Data Reveals Hidden Signaling Components
inferredcites →https://doi.org/10.1126/scisignal.2001965openalex-snapshot
Introduction to Network Analysis in Systems Biology
inferredcites →https://doi.org/10.1128/mcb.16.6.3112openalex-snapshot
DrosophilaNAP-1 Is a Core Histone Chaperone That Functions in ATP-Facilitated Assembly of Regularly Spaced Nucleosomal Arrays
inferredcites →https://doi.org/10.1128/mcb.18.7.4291openalex-snapshot
Human Cyclin K, a Novel RNA Polymerase II-Associated Cyclin Possessing Both Carboxy-Terminal Domain Kinase and Cdk-Activating Kinase Activity
inferredcites →https://doi.org/10.1128/mcb.23.6.2123-2134.2003openalex-snapshot
Transcriptional Repressor Functions of Drosophila E2F1 and E2F2 Cooperate To Inhibit Genomic DNA Synthesis in Ovarian Follicle Cells
inferredcites →https://doi.org/10.1142/9789812701626_0034openalex-snapshot
MINING ALZHEIMER DISEASE RELEVANT PROTEINS FROM INTEGRATED PROTEIN INTERACTOME DATA
inferredcites →https://doi.org/10.1142/9789812772435_0004openalex-snapshot
MINING GENE-DISEASE RELATIONSHIPS FROM BIOMEDICAL LITERATURE: WEIGHTING PROTEIN–PROTEIN INTERACTIONS AND CONNECTIVITY MEASURES
inferredcites →https://doi.org/10.1172/jci.insight.93911openalex-snapshot
Network analysis of the genomic basis of the placebo effect
inferredcites →https://doi.org/10.1186/1297-9686-25-6-517openalex-snapshot
Phenotypic and genetic variability of morphometrical traits in natural populations of Drosophila melanogaster and D simulans. I. Geographic variations
inferredcites →https://doi.org/10.1186/1297-9686-26-1-15openalex-snapshot
Phenotypic and genetic variability of morphometrical traits in natural populations of Drosophila melanogaster and D simulans. II. Within-population variability
inferredcites →https://doi.org/10.1186/1471-2105-8-372openalex-snapshot
Genes2Networks: connecting lists of gene symbols using mammalian protein interactions databases
inferredcites →https://doi.org/10.1186/1471-2164-11-s1-s3openalex-snapshot
Computational approaches for detecting protein complexes from protein interaction networks: a survey
inferredcites →https://doi.org/10.1186/s12864-017-4131-6openalex-snapshot
An uncertain model-based approach for identifying dynamic protein complexes in uncertain protein-protein interaction networks
inferredcites →https://doi.org/10.1242/dev.02406openalex-snapshot
Mechanisms of elongation in embryogenesis
inferredcites →https://doi.org/10.1242/dev.050351openalex-snapshot
Specific roles of Target of rapamycin in the control of stem cells and their progeny in theDrosophilaovary
inferredcites →https://doi.org/10.1242/dev.093773openalex-snapshot
Insulin and Target of rapamycin signaling orchestrate the development of ovarian niche-stem cell units in Drosophila
inferredcites →https://doi.org/10.1242/dev.119.3.799openalex-snapshot
Pattern formation in the limbs of Drosophila: bric à brac is expressed in both a gradient and a wave-like pattern and is required for specification and proper segmentation of the tarsus
inferredcites →https://doi.org/10.1242/dev.121.1.173openalex-snapshot
Mechanisms of cell rearrangement and cell recruitment in Drosophila ovary morphogenesis and the requirement of bric à brac
inferredcites →https://doi.org/10.1242/dev.129.10.2419openalex-snapshot
The bric a brac locus consists of two paralogous genes encoding BTB/POZ domain proteins and acts as a homeotic and morphogenetic regulator of imaginal development in Drosophila
inferredcites →https://doi.org/10.1242/dev.163394openalex-snapshot
Lmx1a is required for the development of the ovarian stem cell niche in Drosophila
inferredcites →https://doi.org/10.1242/jcs.211367openalex-snapshot
An intracellular activation of Smoothened that is independent of Hedgehog stimulation in Drosophila
inferredcites →https://doi.org/10.1371/journal.pbio.1001202openalex-snapshot
Coordinated Regulation of Niche and Stem Cell Precursors by Hormonal Signaling
inferredcites →https://doi.org/10.1371/journal.pcbi.1002819openalex-snapshot
Chapter 4: Protein Interactions and Disease
inferredcites →https://doi.org/10.1371/journal.pgen.1004962openalex-snapshot
The Hippo Pathway Regulates Homeostatic Growth of Stem Cell Niche Precursors in the Drosophila Ovary
inferredcites →https://doi.org/10.1534/g3.117.042390openalex-snapshot
The Genetic Architecture of Ovariole Number inDrosophila melanogaster: Genes with Major, Quantitative, and Pleiotropic Effects
inferredcites →https://doi.org/10.1534/genetics.105.054098openalex-snapshot
High-Resolution Quantitative Trait Locus Mapping Reveals Sign Epistasis Controlling Ovariole Number Between Two Drosophila Species
inferredcites →https://doi.org/10.1534/genetics.108.088906openalex-snapshot
Quantitative Trait Loci Affecting Phenotypic Plasticity and the Allometric Relationship of Ovariole Number and Thorax Length in Drosophila melanogaster
inferredcites →https://doi.org/10.3389/fphys.2016.00375openalex-snapshot
Evolution of Centrality Measurements for the Detection of Essential Proteins in Biological Networks
inferredcites →https://doi.org/10.4137/grsb.s702openalex-snapshot
Centrality Analysis Methods for Biological Networks and Their Application to Gene Regulatory Networks
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1007/978-3-319-32979-6_173openalex-snapshot
Evo-Devo Lessons from the Reproductive Division of Labor in Eusocial Hymenoptera
inferred← citeshttps://doi.org/10.1007/978-3-319-33038-9_173-1openalex-snapshot
Evo-Devo Lessons from the Reproductive Division of Labor in Eusocial Hymenoptera
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