On the public citation graph

A conserved translation factor is required for optimal synthesis of a membrane protein family in mycobacteria

https://doi.org/10.1101/872341
0 signed · 96 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

1 of the 95 references listed on this page is in the Retraction Watch database as retracted (export 2026-10-28): 10.1128/aac.02356-17 (notice 2019-01-29).

Dataset join, best-effort; this page does not check the publisher record. Retraction Watch data via Crossref Labs, used with credit; OpenCitations Index (CC0) and Meta (CC BY 4.0); dataset doi:10.7910/DVN/WT8VOA (CC BY 4.0).

Is this your work? Sign in with ORCID and put your name on the claims that are yours.
Claim with ORCID
Reference health. See whether every reference in this work resolves to a known work and none has been retracted — and get a dated CiteStamped badge you can embed.
See reference health

What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/bip.22832openalex-snapshot
Review: Translational GTPases
inferredcites →https://doi.org/10.1002/rcm.2203openalex-snapshot
Confident protein identification using the average peptide score method coupled with search‐specific, ab initio thresholds
inferredcites →https://doi.org/10.1006/abio.2000.4728openalex-snapshot
Selective Extraction and Purification of a Mycobacterial Outer Membrane Protein
inferredcites →https://doi.org/10.1007/978-1-4939-2450-9_10openalex-snapshot
Mycobacterial Recombineering
inferredcites →https://doi.org/10.1007/978-1-59745-232-8_15openalex-snapshot
Mycobacterial Recombineering
inferredcites →https://doi.org/10.1016/j.bbabio.2014.05.353openalex-snapshot
Mitochondrial EF4 links respiratory dysfunction and cytoplasmic translation in Caenorhabditis elegans
inferredcites →https://doi.org/10.1016/j.bbamcr.2009.11.010openalex-snapshot
Co-translational membrane insertion of mitochondrially encoded proteins
inferredcites →https://doi.org/10.1016/j.bbrc.2004.08.022openalex-snapshot
Whole genome analysis reveals a high incidence of non-optimal codons in secretory signal sequences of Escherichia coli
inferredcites →https://doi.org/10.1016/j.biochi.2009.11.002openalex-snapshot
Translation factor LepA contributes to tellurite resistance in Escherichia coli but plays no apparent role in the fidelity of protein synthesis
inferredcites →https://doi.org/10.1016/j.cell.2006.09.037openalex-snapshot
The Highly Conserved LepA Is a Ribosomal Elongation Factor that Back-Translocates the Ribosome
inferredcites →https://doi.org/10.1016/j.cell.2010.03.033openalex-snapshot
How the Sequence of a Gene Can Tune Its Translation
inferredcites →https://doi.org/10.1016/j.cell.2011.10.044openalex-snapshot
Selective Ribosome Profiling Reveals the Cotranslational Chaperone Action of Trigger Factor In Vivo
inferredcites →https://doi.org/10.1016/j.cell.2013.10.045openalex-snapshot
Tryptophan Biosynthesis Protects Mycobacteria from CD4 T-Cell-Mediated Killing
inferredcites →https://doi.org/10.1016/j.cell.2014.02.033openalex-snapshot
Quantifying Absolute Protein Synthesis Rates Reveals Principles Underlying Allocation of Cellular Resources
inferredcites →https://doi.org/10.1016/j.celrep.2018.12.063openalex-snapshot
Mycobacterium smegmatis HtrA Blocks the Toxic Activity of a Putative Cell Wall Amidase
inferredcites →https://doi.org/10.1016/j.cub.2006.12.029openalex-snapshot
Ribosomal Translocation: LepA Does It Backwards
inferredcites →https://doi.org/10.1016/j.gene.2007.08.006openalex-snapshot
The initiation of eukaryotic and prokaryotic protein synthesis: A selective accessibility and multisubstrate enzyme reaction
inferredcites →https://doi.org/10.1016/j.jmb.2009.12.043openalex-snapshot
Interrupted Catalysis: The EF4 (LepA) Effect on Back-Translocation
inferredcites →https://doi.org/10.1016/j.jprot.2018.02.019openalex-snapshot
Cell wall enrichment unveils proteomic changes in the cell wall during treatment of Mycobacterium smegmatis with sub-lethal concentrations of rifampicin
inferredcites →https://doi.org/10.1016/j.mex.2018.05.013openalex-snapshot
Gel-free sample preparation techniques and bioinformatic enrichment analysis to in depth characterise the cell wall proteome of mycobacteria
inferredcites →https://doi.org/10.1016/j.mib.2013.01.009openalex-snapshot
Ribosome heterogeneity: another level of complexity in bacterial translation regulation
inferredcites →https://doi.org/10.1016/j.molcel.2015.07.018openalex-snapshot
Codon Usage Influences the Local Rate of Translation Elongation to Regulate Co-translational Protein Folding
inferredcites →https://doi.org/10.1016/j.molcel.2017.05.021openalex-snapshot
Heterogeneous Ribosomes Preferentially Translate Distinct Subpools of mRNAs Genome-wide
inferredcites →https://doi.org/10.1016/j.molcel.2018.05.008openalex-snapshot
Accessibility of the Shine-Dalgarno Sequence Dictates N-Terminal Codon Bias in E. coli
inferredcites →https://doi.org/10.1016/j.ygeno.2017.07.008openalex-snapshot
Codon usage bias in 5′ terminal coding sequences reveals distinct enrichment of gene functions
inferredcites →https://doi.org/10.1016/s0167-4889(01)00151-3openalex-snapshot
Function of a chloroplast SRP in thylakoid protein export
inferredcites →https://doi.org/10.1016/s0959-440x(03)00009-5openalex-snapshot
Eukaryotic translation initiation factors and regulators
inferredcites →https://doi.org/10.1016/s0968-0004(03)00162-2openalex-snapshot
Elongation factors in protein biosynthesis
inferredcites →https://doi.org/10.1021/ar5000117openalex-snapshot
Understanding the Influence of Codon Translation Rates on Cotranslational Protein Folding
inferredcites →https://doi.org/10.1021/bi901026zopenalex-snapshot
A Novel Domain in Translational GTPase BipA Mediates Interaction with the 70S Ribosome and Influences GTP Hydrolysis
inferredcites →https://doi.org/10.1038/289751a0openalex-snapshot
Attenuation in the control of expression of bacterial operons
inferredcites →https://doi.org/10.1038/nature10965openalex-snapshot
The anti-Shine–Dalgarno sequence drives translational pausing and codon choice in bacteria
inferredcites →https://doi.org/10.1038/nature11833openalex-snapshot
Non-optimal codon usage affects expression, structure and function of clock protein FRQ
inferredcites →https://doi.org/10.1038/nature19070openalex-snapshot
Global profiling of SRP interaction with nascent polypeptides
inferredcites →https://doi.org/10.1038/nature22361openalex-snapshot
Deletion of a mycobacterial divisome factor collapses single-cell phenotypic heterogeneity
inferredcites →https://doi.org/10.1038/ncomms13302openalex-snapshot
tRNA-mediated codon-biased translation in mycobacterial hypoxic persistence
inferredcites →https://doi.org/10.1038/nmeth.1318openalex-snapshot
Enzymatic assembly of DNA molecules up to several hundred kilobases
inferredcites →https://doi.org/10.1038/nmeth.1701openalex-snapshot
SignalP 4.0: discriminating signal peptides from transmembrane regions
inferredcites →https://doi.org/10.1038/nmicrobiol.2016.274openalex-snapshot
Programmable transcriptional repression in mycobacteria using an orthogonal CRISPR interference platform
inferredcites →https://doi.org/10.1038/nprot.2008.211openalex-snapshot
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
inferredcites →https://doi.org/10.1038/nrg3185openalex-snapshot
Insights into the regulation of protein abundance from proteomic and transcriptomic analyses
inferredcites →https://doi.org/10.1038/nrm4069openalex-snapshot
Ribosome profiling reveals the what, when, where and how of protein synthesis
inferredcites →https://doi.org/10.1038/nrmicro3176openalex-snapshot
EF-G and EF4: translocation and back-translocation on the bacterial ribosome
inferredcites →https://doi.org/10.1038/nsmb.3160openalex-snapshot
EF4 disengages the peptidyl-tRNA CCA end and facilitates back-translocation on the 70S ribosome
inferredcites →https://doi.org/10.1038/nsmb.3206openalex-snapshot
Mammalian elongation factor 4 regulates mitochondrial translation essential for spermatogenesis
inferredcites →https://doi.org/10.1038/s41467-018-06724-xopenalex-snapshot
Cryo-EM structure of the hibernating Thermus thermophilus 100S ribosome reveals a protein-mediated dimerization mechanism
inferredcites →https://doi.org/10.1038/s41579-019-0273-7openalex-snapshot
The mycobacterial cell envelope — a moving target
inferredcites →https://doi.org/10.1038/s41596-018-0006-9openalex-snapshot
Reproducible workflow for multiplexed deep-scale proteome and phosphoproteome analysis of tumor tissues by liquid chromatography–mass spectrometry
inferredcites →https://doi.org/10.1038/srep42098openalex-snapshot
Elongation factor P restricts Salmonella’s growth by controlling translation of a Mg2+ transporter gene during infection
inferredcites →https://doi.org/10.1046/j.1365-2958.1999.01472.xopenalex-snapshot
Cloning of the mspA gene encoding a porin from Mycobacterium smegmatis
inferredcites →https://doi.org/10.1046/j.1365-2958.2001.02394.xopenalex-snapshot
MspA provides the main hydrophilic pathway through the cell wall of Mycobacterium smegmatis
inferredcites →https://doi.org/10.1073/pnas.080077197openalex-snapshot
Association of Escherichia coli ribosomes with the inner membrane requires the signal recognition particle receptor but is independent of the signal recognition particle
inferredcites →https://doi.org/10.1073/pnas.0801308105openalex-snapshot
The structure of LepA, the ribosomal back translocase
inferredcites →https://doi.org/10.1073/pnas.1012994108openalex-snapshot
Elongation factor 4 (EF4/LepA) accelerates protein synthesis at increased Mg 2+ concentrations
inferredcites →https://doi.org/10.1073/pnas.1103820108openalex-snapshot
The conserved protein EF4 (LepA) modulates the elongation cycle of protein synthesis
inferredcites →https://doi.org/10.1073/pnas.1211077110openalex-snapshot
Environmental perturbations lift the degeneracy of the genetic code to regulate protein levels in bacteria
inferredcites →https://doi.org/10.1073/pnas.1514135112openalex-snapshot
Peptidoglycan synthesis in Mycobacterium tuberculosis is organized into networks with varying drug susceptibility
inferredcites →https://doi.org/10.1073/pnas.1522932113openalex-snapshot
Elongation factor 4 remodels the A-site tRNA on the ribosome
inferredcites →https://doi.org/10.1073/pnas.1613665114openalex-snapshot
Conserved GTPase LepA (Elongation Factor 4) functions in biogenesis of the 30S subunit of the 70S ribosome
inferredcites →https://doi.org/10.1073/pnas.1718003115openalex-snapshot
Small RNA profiling in Mycobacterium tuberculosis identifies MrsI as necessary for an anticipatory iron sparing response
inferredcites →https://doi.org/10.1074/jbc.m111.327577openalex-snapshot
Effect of Codon Message on Xylanase Thermal Activity
inferredcites →https://doi.org/10.1074/jbc.m511642200openalex-snapshot
Topology of the Porin MspA in the Outer Membrane of Mycobacterium smegmatis
inferredcites →https://doi.org/10.1074/jbc.m710037200openalex-snapshot
The Membrane-bound GTPase Guf1 Promotes Mitochondrial Protein Synthesis under Suboptimal Conditions
inferredcites →https://doi.org/10.1093/nar/gks1019openalex-snapshot
Global analysis of mRNA stability in Mycobacterium tuberculosis
inferredcites →https://doi.org/10.1093/nar/gku1098openalex-snapshot
The conserved GTPase LepA contributes mainly to translation initiation in Escherichia coli
inferredcites →https://doi.org/10.1093/nar/gkw1231openalex-snapshot
The impact of recent improvements in cryo-electron microscopy technology on the understanding of bacterial ribosome assembly
inferredcites →https://doi.org/10.1093/nar/gkx888openalex-snapshot
Signal recognition particle binds to translating ribosomes before emergence of a signal anchor sequence
inferredcites →https://doi.org/10.1111/j.1365-2958.2005.04878.xopenalex-snapshot
The growth rate of Mycobacterium smegmatis depends on sufficient porin‐mediated influx of nutrients
inferredcites →https://doi.org/10.1111/j.1574-6968.2010.02083.xopenalex-snapshot
Deletion of the elongation factor 4 gene (lepA) in Streptomyces coelicolor enhances the production of the calcium-dependent antibiotic
inferredcites →https://doi.org/10.1111/mmi.13233openalex-snapshot
Stall no more at polyproline stretches with the translation elongation factors EF‐P and IF‐5A
inferredcites →https://doi.org/10.1126/science.1241934openalex-snapshot
Causes and Effects of N-Terminal Codon Bias in Bacterial Genes
inferredcites →https://doi.org/10.1126/science.aac8171openalex-snapshot
Operon structure and cotranslational subunit association direct protein assembly in bacteria
inferredcites →https://doi.org/10.1126/science.aad9822openalex-snapshot
Term-seq reveals abundant ribo-regulation of antibiotics resistance in bacteria
inferredcites →https://doi.org/10.1128/aac.00239-08openalex-snapshot
Role of Porins for Uptake of Antibiotics by Mycobacterium smegmatis
inferredcites →https://doi.org/10.1128/aac.00590-09openalex-snapshot
Role of Porins in the Susceptibility of Mycobacterium smegmatis and Mycobacterium chelonae to Aldehyde-Based Disinfectants and Drugs
inferredcites →https://doi.org/10.1128/aac.02356-17openalex-snapshot
Translation Elongation Factor 4 (LepA) Contributes to Tetracycline Susceptibility by Stalling Elongating Ribosomes
inferredcites →https://doi.org/10.1128/iai.01053-10openalex-snapshot
Cooperation between LepA and PlcH Contributes to theIn VivoVirulence and Growth ofPseudomonas aeruginosain Mice
inferredcites →https://doi.org/10.1128/jb.01474-06openalex-snapshot
Expression of the Major Porin Gene mspA Is Regulated in Mycobacterium smegmatis
inferredcites →https://doi.org/10.1128/jb.185.22.6719-6722.2003openalex-snapshot
Translocon “Pulling” of Nascent SecM Controls the Duration of Its Translational Pause and Secretion-Responsive secA Regulation
inferredcites →https://doi.org/10.1128/mcb.00653-16openalex-snapshot
Taking a Step Back from Back-Translocation: an Integrative View of LepA/EF4's Cellular Function
inferredcites →https://doi.org/10.1128/mmbr.69.1.101-123.2005openalex-snapshot
Initiation of Protein Synthesis in Bacteria
inferredcites →https://doi.org/10.1146/annurev-biochem-013118-111717openalex-snapshot
Mechanisms of Cotranslational Maturation of Newly Synthesized Proteins
inferredcites →https://doi.org/10.1158/0008-5472.can-17-2059openalex-snapshot
Human Elongation Factor 4 Regulates Cancer Bioenergetics by Acting as a Mitochondrial Translation Switch
inferredcites →https://doi.org/10.1186/1471-2180-11-35openalex-snapshot
Ethidium bromide transport across Mycobacterium smegmatiscell-wall: correlation with antibiotic resistance
inferredcites →https://doi.org/10.1186/s13059-014-0550-8openalex-snapshot
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
inferredcites →https://doi.org/10.1261/rna.066787.118openalex-snapshot
Translation elongation and mRNA stability are coupled through the ribosomal A-site
inferredcites →https://doi.org/10.1261/rna.620507openalex-snapshot
RNA-based regulation of genes of tryptophan synthesis and degradation, in bacteria
inferredcites →https://doi.org/10.1371/journal.pone.0049746openalex-snapshot
CpLEPA Is Critical for Chloroplast Protein Synthesis Under Suboptimal Conditions in Arabidopsis thaliana
inferredcites →https://doi.org/10.1371/journal.pone.0106232openalex-snapshot
Improved Cell-Free RNA and Protein Synthesis System
inferredcites →https://doi.org/10.1371/journal.pone.0159999openalex-snapshot
BipA Is Associated with Preventing Autoagglutination and Promoting Biofilm Formation in Bordetella holmesii
inferredcites →https://doi.org/10.1517/14728222.12.5.519openalex-snapshot
Initiation of protein synthesis: a target for antimicrobials
inferredcites →https://doi.org/10.7554/elife.03440openalex-snapshot
mRNA-programmed translation pauses in the targeting of E. coli membrane proteins
inferredcites →https://doi.org/10.7554/elife.37516openalex-snapshot
Maturing Mycobacterium smegmatis peptidoglycan requires non-canonical crosslinks to maintain shape
inferredcites →https://doi.org/10.7554/elife.40063openalex-snapshot
Mycobacterium tuberculosis SatS is a chaperone for the SecA2 protein export pathway
inferredcites →https://doi.org/10.7554/elife.42591openalex-snapshot
A systematically-revised ribosome profiling method for bacteria reveals pauses at single-codon resolution

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1038/s41598-020-65308-2openalex-snapshot
Clinically relevant mutations in mycobacterial LepA cause rifampicin-specific phenotypic resistance
Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.