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Living with two extremes: Conclusions from the genome sequence of Natronomonas pharaonis
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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Bacterial Energetics at High pH: What Happens to the H + Cycle When the Extracellular H + Concentration Decreases?
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Analysis of the cytosolic proteome of Halobacterium salinarum and its implication for genome annotation
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The membrane proteome of Halobacterium salinarum
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A Conserved Tryptophan at the Ferredoxin-Binding Site of Ferredoxin:Nitrite Oxidoreductase
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Deletion Analysis of thecheOperon in the ArchaeonHalobacterium salinarium
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Predicting transmembrane protein topology with a hidden markov model: application to complete genomes11Edited by F. Cohen
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Cell wall polymers in Archaea (Archaebacteria)
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Isolation of a chymotrypsinogen B-like enzyme from the archaeon Natronomonas pharaonis and other halobacteria
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Respiratory chains of archaea and extremophiles
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Complex formation between ferredoxin and Synechococcus ferredoxin:nitrate oxidoreductase
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Translocation of proteins across archaeal cytoplasmic membranes
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The archaeal sensory rhodopsin II/transducer complex: a model for transmembrane signal transfer
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The primary structure of halocyanin, an archaeal blue copper protein, predicts a lipid anchor for membrane fixation.
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The primary structure of a procaryotic glycoprotein. Cloning and sequencing of the cell surface glycoprotein gene of halobacteria.
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The primary structure of a halorhodopsin from Natronobacterium pharaonis. Structural, functional and evolutionary implications for bacterial rhodopsins and halorhodopsins.
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The archaeal flagellum: a different kind of prokaryotic motility structure
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Assimilatory nitrate reductase from the haloarchaeon Haloferax mediterranei: purification and characterisation
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Halobacterium pharaonis sp. nov., a New, Extremely Haloalkaliphilic Archaebacterium with Low Magnesium Requirement
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Natronobacterium gen. nov. and Natronococcus gen. nov., Two New Genera of Haloalkaliphilic Archaebacteria
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Electron Transfer Proteins from the Haloalkaliphilic Archaeon Natronobacterium pharaonis: Possible Components of the Respiratory Chain Include Cytochrome bc and a Terminal Oxidase Cytochrome ba3
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A New Type-II NADH Dehydrogenase from the Archaeon Acidianus ambivalens: Characterization and in vitro Reconstitution of the Respiratory Chain
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Primary reactions of sensory rhodopsins
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Genome sequence of Halobacterium species NRC-1
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Primary structure of an archaebacterial transducer, a methyl-accepting protein associated with sensory rhodopsin I.
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The primary structures of the Archaeon Halobacterium salinarium blue light receptor sensory rhodopsin II and its transducer, a methyl-accepting protein.
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Primary reactions of sensory rhodopsins
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Evidence for Covalent Attachment of Diphytanylglyceryl Phosphate to the Cell-surface Glycoprotein of Halobacterium halobium
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tRNAscan-SE: A Program for Improved Detection of Transfer RNA Genes in Genomic Sequence
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tRNAscan-SE: A Program for Improved Detection of Transfer RNA Genes in Genomic Sequence
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Recent improvements to the PROSITE database
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CRITICA: coding region identification tool invoking comparative analysis
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Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites
inferredcites →https://doi.org/10.1099/00221287-148-11-3335openalex-snapshot
Protein transport in the halophilic archaeon Halobacterium sp. NRC-1: a major role for the twin-arginine translocation pathway?
inferredcites →https://doi.org/10.1101/gr.2700304openalex-snapshot
Genome sequence of Haloarcula marismortui : A halophilic archaeon from the Dead Sea
inferredcites →https://doi.org/10.1101/gr.8.3.195openalex-snapshot
Consed: A Graphical Tool for Sequence Finishing
inferredcites →https://doi.org/10.1111/j.1365-2958.2005.04516.xopenalex-snapshot
MpcT is the transducer for membrane potential changes in Halobacterium salinarum
inferredcites →https://doi.org/10.1111/j.1432-1033.1992.tb17175.xopenalex-snapshot
The laws of cell energetics
inferredcites →https://doi.org/10.1111/j.1432-1033.1997.0332a.xopenalex-snapshot
Cytochrome ba3 from Natronobacterium pharaonis
inferredcites →https://doi.org/10.1126/science.278.5338.631openalex-snapshot
A Genomic Perspective on Protein Families
inferredcites →https://doi.org/10.1128/jb.178.16.4942-4947.1996openalex-snapshot
Fermentative arginine degradation in Halobacterium salinarium (formerly Halobacterium halobium): genes, gene products, and transcripts of the arcRACB gene cluster
inferredcites →https://doi.org/10.1128/jb.179.10.3146-3153.1997openalex-snapshot
2-Sulfotrehalose, a novel osmolyte in haloalkaliphilic archaea
inferredcites →https://doi.org/10.1128/jb.185.20.5959-5966.2003openalex-snapshot
An Archaeal Chromosomal Autonomously Replicating Sequence Element from an Extreme Halophile,Halobacteriumsp. Strain NRC-1
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Alkaliphiles: Some Applications of Their Products for Biotechnology
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The Low Molecular Weight Proteome of Halobacterium salinarum
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The haloarchaeal chromosome replication machinery
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Optogenetic control of epileptiform activity
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Salt-driven Equilibrium between Two Conformations in the HAMP Domain from Natronomonas pharaonis
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Halophilic archaea produce wax esters and use an alternative fatty acyl-coenzyme A reductase for precursor synthesis
inferred← citeshttps://doi.org/10.1093/molbev/msab146openalex-snapshot
Resurrection of Ancestral Malate Dehydrogenases Reveals the Evolutionary History of Halobacterial Proteins: Deciphering Gene Trajectories and Changes in Biochemical Properties
inferred← citeshttps://doi.org/10.1093/nar/gkn152openalex-snapshot
Dissection of the regulatory mechanism of a heat-shock responsive promoter in Haloarchaea: a new paradigm for general transcription factor directed archaeal gene regulation
inferred← citeshttps://doi.org/10.1093/synbio/ysz027openalex-snapshot
Enhancing control of cell-free metabolism through pH modulation
inferred← citeshttps://doi.org/10.1099/ijs.0.010132-0openalex-snapshot
Natronomonas moolapensis sp. nov., non-alkaliphilic isolates recovered from a solar saltern crystallizer pond, and emended description of the genus Natronomonas
inferred← citeshttps://doi.org/10.1099/ijs.0.038653-0openalex-snapshot
Taxonomy of the family Halobacteriaceae: a paradigm for changing concepts in prokaryote systematics
inferred← citeshttps://doi.org/10.1099/ijs.0.65190-0openalex-snapshot
Phylogenetic relationships within the family Halobacteriaceae inferred from rpoB′ gene and protein sequences
inferred← citeshttps://doi.org/10.1099/mic.0.2007/007450-0openalex-snapshot
Three putative cation/proton antiporters from the soda lake alkaliphile Alkalimonas amylolytica N10 complement an alkali-sensitive Escherichia coli mutant
inferred← citeshttps://doi.org/10.1099/mic.0.2008/019422-0openalex-snapshot
The transcription programme of the protein-primed halovirus SH1
inferred← citeshttps://doi.org/10.1101/2023.05.07.539728openalex-snapshot
Relationship between prokaryotic GC content and environmental salinity
inferred← citeshttps://doi.org/10.1101/342949openalex-snapshot
Prokaryotic Diversity from Extreme Environments of Pakistan and its Potential Applications at Regional Levels
inferred← citeshttps://doi.org/10.1107/s2059798321009542openalex-snapshot
Ambiguities in and completeness of SAS data analysis of membrane proteins: the case of the sensory rhodopsin II–transducer complex
inferred← citeshttps://doi.org/10.1111/1462-2920.13580openalex-snapshot
Glycerol metabolism of haloarchaea
inferred← citeshttps://doi.org/10.1111/1462-2920.15082openalex-snapshot
Culturomics‐based genomics sheds light on the ecology of the new haloarchaeal genus Halosegnis
inferred← citeshttps://doi.org/10.1111/1574-6968.12052openalex-snapshot
Characterization of the minimal replicon of pHM300 and independent copy number control of major and minor chromosomes of Haloferax mediterranei
inferred← citeshttps://doi.org/10.1111/j.1365-2958.2005.04975.xopenalex-snapshot
ATP‐ and NAD+‐dependent DNA ligases share an essential function in the halophilic archaeon Haloferax volcanii
inferred← citeshttps://doi.org/10.1111/j.1365-2958.2006.05252.xopenalex-snapshot
Protein N‐glycosylation in Archaea: defining Haloferax volcanii genes involved in S‐layer glycoprotein glycosylation
inferred← citeshttps://doi.org/10.1111/j.1365-2958.2010.07101.xopenalex-snapshot
Regulation of phosphate uptake via Pst transporters in Halobacterium salinarum R1
inferred← citeshttps://doi.org/10.1111/j.1462-2920.2005.00951.xopenalex-snapshot
More cool news from marine bacteria
inferred← citeshttps://doi.org/10.1111/j.1574-6941.2010.00893.xopenalex-snapshot
UV photoreactions of the extremely haloalkaliphilic euryarchaeon Natronomonas pharaonis
inferred← citeshttps://doi.org/10.1111/j.1574-6968.2006.00107.xopenalex-snapshot
ThetatCgene cluster is essential for viability in halophilic archaea
inferred← citeshttps://doi.org/10.1111/j.1574-6968.2009.01710.xopenalex-snapshot
Haloarchaeal assimilatory nitrate-reducing communities from a saline alkaline soil
inferred← citeshttps://doi.org/10.11144/javeriana.10554.59833openalex-snapshot
Análisis in silico de comunidades microbianas halófilas y su relación con las condiciones ambientales en depósitos salinos empleados para la producción de sal gourmet en Manaure, La Guajira
inferred← citeshttps://doi.org/10.1128/9781555815516.ch17openalex-snapshot
Protein Translocation into and across Archaeal Cytoplasmic Membranes
inferred← citeshttps://doi.org/10.1128/9781555815813.ch18openalex-snapshot
Response to Osmotic Stress in a Haloarchaeal Genome: a Role for General Stress Proteins and Global Regulatory Mechanisms
inferred← citeshttps://doi.org/10.1128/9781555815813.ch19openalex-snapshot
Molecular Adaptation to High Salt
inferred← citeshttps://doi.org/10.1128/9781555815813.ch24openalex-snapshot
Bioenergetic Adaptations That Support Alkaliphily
inferred← citeshttps://doi.org/10.1128/9781555818982.ch20openalex-snapshot
Plasmids fromEuryarchaeota
inferred← citeshttps://doi.org/10.1128/aem.00246-22openalex-snapshot
Sec-Dependent Secretion of Subtilase SptE in Haloarchaea Facilitates Its Proper Folding and Heterocatalytic Processing by Halolysin SptA Extracellularly
inferred← citeshttps://doi.org/10.1128/aem.00540-24openalex-snapshot
The biosynthesis mechanism of bacterioruberin in halophilic archaea revealed by genome and transcriptome analysis
inferred← citeshttps://doi.org/10.1128/aem.00681-10openalex-snapshot
Towards Glycoengineering in Archaea: Replacement of Haloferax volcanii AglD with Homologous Glycosyltransferases from Other Halophilic Archaea
inferred← citeshttps://doi.org/10.1128/aem.01117-10openalex-snapshot
Wide Distribution among Halophilic Archaea of a Novel Polyhydroxyalkanoate Synthase Subtype with Homology to Bacterial Type III Synthases
inferred← citeshttps://doi.org/10.1128/aem.01443-24openalex-snapshot
Inside the Atacama Desert: uncovering the living microbiome of an extreme environment
inferred← citeshttps://doi.org/10.1128/aem.01625-06openalex-snapshot
Autoinducer-2-Producing Protein LuxS, a Novel Salt- and Chloride-Induced Protein in the Moderately Halophilic Bacterium Halobacillus halophilus
inferred← citeshttps://doi.org/10.1128/aem.01868-10openalex-snapshot
Halophiles 2010: Life in Saline Environments
inferred← citeshttps://doi.org/10.1128/genomea.00095-13openalex-snapshot
Genome of the Haloarchaeon Natronomonas moolapensis, a Neutrophilic Member of a Previously Haloalkaliphilic Genus
inferred← citeshttps://doi.org/10.1128/jb.00673-09openalex-snapshot
Different Minimal Signal Peptide Lengths Recognized by the Archaeal Prepilin-Like Peptidases FlaK and PibD
inferred← citeshttps://doi.org/10.1128/jb.00903-06openalex-snapshot
The Streptomyces NrdR Transcriptional Regulator Is a Zn Ribbon/ATP Cone Protein That Binds to the Promoter Regions of Class Ia and Class II Ribonucleotide Reductase Operons
inferred← citeshttps://doi.org/10.1128/jb.00988-06openalex-snapshot
Molecular Characterization of the Minimal Replicon and the Unidirectional Theta Replication of pSCM201 in Extremely Halophilic Archaea
inferred← citeshttps://doi.org/10.1128/jb.01180-08openalex-snapshot
Proteasomal Components Required for Cell Growth and Stress Responses in the Haloarchaeon Haloferax volcanii
inferred← citeshttps://doi.org/10.1128/jb.01547-06openalex-snapshot
Identification of Diverse Archaeal Proteins with Class III Signal Peptides Cleaved by Distinct Archaeal Prepilin Peptidases
inferred← citeshttps://doi.org/10.1128/jb.01838-08openalex-snapshot
Manual Annotation, Transcriptional Analysis, and Protein Expression Studies Reveal Novel Genes in the agl Cluster Responsible for N Glycosylation in the Halophilic Archaeon Haloferax volcanii
inferred← citeshttps://doi.org/10.1128/jb.188.5.1911-1919.2006openalex-snapshot
Cloning, Expression, and Purification of Functional Sec11a and Sec11b, Type I Signal Peptidases of the Archaeon Haloferax volcanii
inferred← citeshttps://doi.org/10.1128/microbiolspec.plas-0027-2014openalex-snapshot
Plasmids from Euryarchaeota
inferred← citeshttps://doi.org/10.1128/mmbr.00032-06openalex-snapshot
Surprising Arginine Biosynthesis: a Reappraisal of the Enzymology and Evolution of the Pathway in Microorganisms
inferred← citeshttps://doi.org/10.1128/mmbr.00042-14openalex-snapshot
Archaeal Extrachromosomal Genetic Elements
inferred← citeshttps://doi.org/10.1128/spectrum.01782-21openalex-snapshot
Net Charges of the Ribosomal Proteins of the S10 and spc Clusters of Halophiles Are Inversely Related to the Degree of Halotolerance
inferred← citeshttps://doi.org/10.1155/2006/542818openalex-snapshot
A putative viral defence mechanism in archaeal cells
inferred← citeshttps://doi.org/10.1155/2006/562404openalex-snapshot
Distribution, structure and diversity of “bacterial” genes encoding two‐component proteins in the Euryarchaeota
inferred← citeshttps://doi.org/10.1155/2010/410975openalex-snapshot
Mutational and Bioinformatic Analysis of Haloarchaeal Lipobox-Containing Proteins
inferred← citeshttps://doi.org/10.1155/2013/373275openalex-snapshot
Protein Adaptations in Archaeal Extremophiles
inferred← citeshttps://doi.org/10.1155/2013/732864openalex-snapshot
Mechanisms of Metal Resistance and Homeostasis in Haloarchaea
inferred← citeshttps://doi.org/10.1186/1471-2148-10-383openalex-snapshot
Ribonucleotide reduction - horizontal transfer of a required function spans all three domains
inferred← citeshttps://doi.org/10.1186/1471-2148-7-79openalex-snapshot
Evolution of rhodopsin ion pumps in haloarchaea
inferred← citeshttps://doi.org/10.1186/1471-2164-13-165openalex-snapshot
A comparative genomics perspective on the genetic content of the alkaliphilic haloarchaeon Natrialba magadii ATCC 43099T
inferred← citeshttps://doi.org/10.1186/1471-2164-13-39openalex-snapshot
The core and unique proteins of haloarchaea
inferred← citeshttps://doi.org/10.1186/1471-2164-13-478openalex-snapshot
Diversity and evolution of multiple orc/cdc6-adjacent replication origins in haloarchaea
inferred← citeshttps://doi.org/10.1186/1471-2164-15-473openalex-snapshot
Genomic and phenotypic attributes of novel salinivibrios from stromatolites, sediment and water from a high altitude lake
inferred← citeshttps://doi.org/10.1186/1471-2164-7-169openalex-snapshot
The genome of the square archaeon Haloquadratum walsbyi : life at the limits of water activity
inferred← citeshttps://doi.org/10.1186/1471-2164-8-86openalex-snapshot
Phylogenomic analysis of proteins that are distinctive of Archaea and its main subgroups and the origin of methanogenesis
inferred← citeshttps://doi.org/10.1186/1472-6807-11-23openalex-snapshot
Crystal structures of a halophilic archaeal malate synthase from Haloferax volcanii and comparisons with isoforms A and G
inferred← citeshttps://doi.org/10.1186/1745-6150-2-33openalex-snapshot
Clusters of orthologous genes for 41 archaeal genomes and implications for evolutionary genomics of archaea
inferred← citeshttps://doi.org/10.1186/1746-1448-2-3openalex-snapshot
Post-genomics of the model haloarchaeon Halobacterium sp. NRC-1.
inferred← citeshttps://doi.org/10.1186/1746-1448-4-2openalex-snapshot
Microbial life at high salt concentrations: phylogenetic and metabolic diversity
inferred← citeshttps://doi.org/10.1186/1746-1448-6-12openalex-snapshot
HaloWeb: the haloarchaeal genomes database
inferred← citeshttps://doi.org/10.1186/1752-0509-4-s1-s1openalex-snapshot
Archaic chaos: intrinsically disordered proteins in Archaea
inferred← citeshttps://doi.org/10.1186/s12859-018-2020-xopenalex-snapshot
SLALOM, a flexible method for the identification and statistical analysis of overlapping continuous sequence elements in sequence- and time-series data
inferred← citeshttps://doi.org/10.1186/s12864-026-12864-yopenalex-snapshot
Whole-genome analysis reveals the growth-promoting and biocontrol potential of Bacillus amyloliquefaciens Ba. YN.J3 isolated from Avena Sativa
inferred← citeshttps://doi.org/10.1186/s13059-023-02973-2openalex-snapshot
Protein length distribution is remarkably uniform across the tree of life
inferred← citeshttps://doi.org/10.1186/s40793-026-00918-3openalex-snapshot
Salinity-adapted and core microbiota along the soil salinity gradients encircling the Tarim Basin
inferred← citeshttps://doi.org/10.12688/f1000research.20765.1openalex-snapshot
Recent advances in understanding extremophiles
inferred← citeshttps://doi.org/10.12688/f1000research.4789.1openalex-snapshot
The effects of extremes of pH on the growth and transcriptomic profiles of three haloarchaea
inferred← citeshttps://doi.org/10.12688/f1000research.4789.2openalex-snapshot
The effects of extremes of pH on the growth and transcriptomic profiles of three haloarchaea.
inferred← citeshttps://doi.org/10.1371/journal.pcbi.1000332openalex-snapshot
Systems Analysis of Bioenergetics and Growth of the Extreme Halophile Halobacterium salinarum
inferred← citeshttps://doi.org/10.1371/journal.pcbi.1000799openalex-snapshot
Characterization of Growth and Metabolism of the Haloalkaliphile Natronomonas pharaonis
inferred← citeshttps://doi.org/10.1371/journal.pone.0005485openalex-snapshot
Diurnally Entrained Anticipatory Behavior in Archaea
inferred← citeshttps://doi.org/10.1371/journal.pone.0009605openalex-snapshot
The Complete Genome Sequence of Haloferax volcanii DS2, a Model Archaeon
inferred← citeshttps://doi.org/10.1371/journal.pone.0020237openalex-snapshot
Novel Insights into the Diversity of Catabolic Metabolism from Ten Haloarchaeal Genomes
inferred← citeshttps://doi.org/10.1371/journal.pone.0020968openalex-snapshot
Haloquadratum walsbyi : Limited Diversity in a Global Pond
inferred← citeshttps://doi.org/10.1371/journal.pone.0021616openalex-snapshot
The Elusive Third Subunit IIa of the Bacterial B-Type Oxidases: The Enzyme from the Hyperthermophile Aquifex aeolicus
inferred← citeshttps://doi.org/10.1371/journal.pone.0041389openalex-snapshot
Sequencing of Seven Haloarchaeal Genomes Reveals Patterns of Genomic Flux
inferred← citeshttps://doi.org/10.1371/journal.pone.0041621openalex-snapshot
The Complete Genome Sequence of Natrinema sp. J7-2, a Haloarchaeon Capable of Growth on Synthetic Media without Amino Acid Supplements
inferred← citeshttps://doi.org/10.1371/journal.pone.0056363openalex-snapshot
Using Haloarcula marismortui Bacteriorhodopsin as a Fusion Tag for Enhancing and Visible Expression of Integral Membrane Proteins in Escherichia coli
inferred← citeshttps://doi.org/10.1371/journal.pone.0058587openalex-snapshot
Amino Acid Substitutions in Cold-Adapted Proteins from Halorubrum lacusprofundi, an Extremely Halophilic Microbe from Antarctica
inferred← citeshttps://doi.org/10.2174/9789815080353122010005openalex-snapshot
Extremophiles: An Overview
inferred← citeshttps://doi.org/10.2298/aoo0602011sopenalex-snapshot
Eukaryotes arose after genetic recombination
inferred← citeshttps://doi.org/10.2298/aoo0804088sopenalex-snapshot
Nucleogenesis and origin of organelles
inferred← citeshttps://doi.org/10.33697/ajur.2009.015openalex-snapshot
Crystallization and Preliminary X-ray Diffraction of a Halophilic Archaeal Malate Synthase
inferred← citeshttps://doi.org/10.3389/fmicb.2012.00207openalex-snapshot
Diversity and Subcellular Distribution of Archaeal Secreted Proteins
inferred← citeshttps://doi.org/10.3389/fmicb.2026.1774663openalex-snapshot
Hydrostatic pressure-enabled transformation in Natronomonas pharaonis: breaking barriers in haloalkaliphilic Archaea genetics
inferred← citeshttps://doi.org/10.3390/genes12070963openalex-snapshot
Open Issues for Protein Function Assignment in Haloferax volcanii and Other Halophilic Archaea
inferred← citeshttps://doi.org/10.3390/ijms17081355openalex-snapshot
Comparative Genomics of the Extreme Acidophile Acidithiobacillus thiooxidans Reveals Intraspecific Divergence and Niche Adaptation
inferred← citeshttps://doi.org/10.3390/life5021427openalex-snapshot
A Manual Curation Strategy to Improve Genome Annotation: Application to a Set of Haloarchael Genomes
inferred← citeshttps://doi.org/10.3390/microorganisms12081738openalex-snapshot
Haloarchaea as Promising Chassis to Green Chemistry
inferred← citeshttps://doi.org/10.3390/microorganisms8040605openalex-snapshot
Natronomonas salsuginis sp. nov., a New Inhabitant of a Marine Solar Saltern
inferred← citeshttps://doi.org/10.4056/sigs.3677284openalex-snapshot
Complete genome sequence of Halorhodospira halophila SL1
inferred← citeshttps://doi.org/10.4056/sigs.681272openalex-snapshot
Complete genome sequence of Haloterrigena turkmenica type strain (4kT)
inferred← citeshttps://doi.org/10.5194/bg-18-3751-2021openalex-snapshot
Evaluating the potential for Haloarchaea to serve as ice nucleating particles
inferred← citeshttps://doi.org/10.5282/edoc.10104openalex-snapshot
Genome-Wide Proteomics and Quantitative Analyses on Halophilic Archaea
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