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Mitochondrial CLPP2 Assists Coordination and Homeostasis of Respiratory Complexes

https://doi.org/10.1104/pp.20.00136

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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A nuclear-encoded ClpP subunit of the chloroplast ATP-dependent Clp protease is essential for early development in Arabidopsis thaliana

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[25] ATP-dependent protease La (Lon) from Escherichia coli

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MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

inferredcites →https://doi.org/10.1038/ncomms2397openalex-snapshot

Human CLPP reverts the longevity phenotype of a fungal ClpP deletion strain

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E-CRISP: fast CRISPR target site identification

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Proteome-wide identification of ubiquitin interactions using UbIA-MS

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Alternative roles of ClpX and ClpP in Staphylococcus aureus stress tolerance and virulence

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Subcomplexes of Ancestral Respiratory Complex I Subunits Rapidly Turn Over in Vivo as Productive Assembly Intermediates in Arabidopsis*

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Clp Protease Complexes from Photosynthetic and Non-photosynthetic Plastids and Mitochondria of Plants, Their Predicted Three-dimensional Structures, and Functional Implications

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Multiplexed Protein Quantitation in Saccharomyces cerevisiae Using Amine-reactive Isobaric Tagging Reagents

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Heterogeneity of the Mitochondrial Proteome for Photosynthetic and Non-photosynthetic Arabidopsis Metabolism

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Large Scale Comparative Proteomics of a Chloroplast Clp Protease Mutant Reveals Folding Stress, Altered Protein Homeostasis, and Feedback Regulation of Metabolism

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CRISPRdirect: software for designing CRISPR/Cas guide RNA with reduced off-target sites

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RNA degradation buffers asymmetries of transcription in Arabidopsis mitochondria

inferredcites →https://doi.org/10.1093/hmg/ddt338openalex-snapshot

Loss of mitochondrial peptidase Clpp leads to infertility, hearing loss plus growth retardation via accumulation of CLPX, mtDNA and inflammatory factors

inferredcites →https://doi.org/10.1093/jxb/erx066openalex-snapshot

Generation and characterization of a collection of knock-down lines for the chloroplast Clp protease complex in tobacco

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Subscriptions

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NCBI GEO: archive for functional genomics data sets—update

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inferredcites →https://doi.org/10.1093/pcp/pcm052openalex-snapshot

Multiple Intracellular Locations of Lon Protease in Arabidopsis: Evidence for the Localization of AtLon4 to Chloroplasts

inferredcites →https://doi.org/10.1099/00221287-148-7-2255openalex-snapshot

The clpP multigene family for the ATP-dependent Clp protease in the cyanobacterium Synechococcus c cThe GenBank accession numbers for the sequences of clpPII-clpX and clpR-clpPIII reported in this paper are U92039 and AJ132005, respectively.

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Structural and Functional Insights into the Chloroplast ATP-Dependent Clp Protease in Arabidopsis

inferredcites →https://doi.org/10.1105/tpc.108.063784openalex-snapshot

Subunits of the Plastid ClpPR Protease Complex Have Differential Contributions to Embryogenesis, Plastid Biogenesis, and Plant Development inArabidopsis

inferredcites →https://doi.org/10.1105/tpc.109.068536openalex-snapshot

Phage-Type RNA Polymerase RPOTmp Performs Gene-Specific Transcription in Mitochondria of Arabidopsis thaliana

inferredcites →https://doi.org/10.1111/j.1399-3054.2011.01531.xopenalex-snapshot

A novel mitochondrial and chloroplast peptidasome, PreP

inferredcites →https://doi.org/10.1111/j.1432-1033.1992.tb17245.xopenalex-snapshot

Affinity purification of cytochrome c reductase from potato mitochondria

inferredcites →https://doi.org/10.1111/j.1469-8137.2008.02701.xopenalex-snapshot

Role of Lon1 protease in post‐germinative growth and maintenance of mitochondrial function in Arabidopsis thaliana

inferredcites →https://doi.org/10.1111/tpj.13392openalex-snapshot

Changes in specific protein degradation rates in Arabidopsis thaliana reveal multiple roles of Lon1 in mitochondrial protein homeostasis

inferredcites →https://doi.org/10.1111/tpj.13448openalex-snapshot

The mitochondrial complexome of Arabidopsis thaliana

inferredcites →https://doi.org/10.1111/tpj.14133openalex-snapshot

The assembly pathway of complex I in Arabidopsis thaliana

inferredcites →https://doi.org/10.1111/tpj.14293openalex-snapshot

The macrocyclizing protease butelase 1 remains autocatalytic and reveals the structural basis for ligase activity

inferredcites →https://doi.org/10.1128/jb.01233-07openalex-snapshot

Clp-Dependent Proteolysis Down-Regulates Central Metabolic Pathways in Glucose-Starved Bacillus subtilis

inferredcites →https://doi.org/10.1146/annurev-arplant-042110-103857openalex-snapshot

Organization and Regulation of Mitochondrial Respiration in Plants

inferredcites →https://doi.org/10.1146/annurev-arplant-043014-115547openalex-snapshot

Protein Maturation and Proteolysis in Plant Plastids, Mitochondria, and Peroxisomes

inferredcites →https://doi.org/10.1146/annurev-arplant-050718-100412openalex-snapshot

Assembly of the Complexes of the Oxidative Phosphorylation System in Land Plant Mitochondria

inferredcites →https://doi.org/10.1146/annurev.ge.24.120190.000515openalex-snapshot

CONTROL OF MITOCHONDRIAL GENE EXPRESSION IN SACCHAROMYCES CEREVISIAE

inferredcites →https://doi.org/10.1186/1746-4811-1-11openalex-snapshot

Blue-native PAGE in plants: a tool in analysis of protein-protein interactions

inferredcites →https://doi.org/10.1186/s13059-014-0550-8openalex-snapshot

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

inferredcites →https://doi.org/10.1186/s13059-015-0715-0openalex-snapshot

Egg cell-specific promoter-controlled CRISPR/Cas9 efficiently generates homozygous mutants for multiple target genes in Arabidopsis in a single generation

inferredcites →https://doi.org/10.12688/f1000research.15872.1openalex-snapshot

The evolution and diversity of the nonsense-mediated mRNA decay pathway

inferredcites →https://doi.org/10.15252/embj.201694253openalex-snapshot

CLPP coordinates mitoribosomal assembly through the regulation of ERAL1 levels

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Incoming claims: where this work appears in other papers’ reference lists and arguments.

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