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Pushing the boundaries of molecular replacement with maximum likelihood

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Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/978-1-4613-2979-4_10openalex-snapshot
Molecular Replacement Method
inferredcites →https://doi.org/10.1016/0022-2836(88)90541-4openalex-snapshot
Refined crystal structure of Streptomyces griseus trypsin at 1.7 Å resolution
inferredcites →https://doi.org/10.1016/s0076-6879(97)76069-5openalex-snapshot
[23] Bayesian statistical viewpoint on structure determination: Basic concepts and examples
inferredcites →https://doi.org/10.1016/s0076-6879(97)76073-7openalex-snapshot
[27] Maximum-likelihood heavy-atom parameter refinement for multiple isomorphous replacement and multiwavelength anomalous diffraction methods
inferredcites →https://doi.org/10.1016/s0076-6879(97)77009-5openalex-snapshot
[7] Model phases: Probabilities and bias
inferredcites →https://doi.org/10.1074/jbc.m004281200openalex-snapshot
Crystal Structure of a Thermophilic Cytochrome P450 from the Archaeon Sulfolobus solfataricus
inferredcites →https://doi.org/10.1093/biomet/43.1-2.212openalex-snapshot
The Multivariate Distribution of Complex Normal Variables
inferredcites →https://doi.org/10.1093/oso/9780198559269.001.0001openalex-snapshot
Introduction to Crystallographic Statistics
inferredcites →https://doi.org/10.1107/s0021889887086102openalex-snapshot
Experiences with a new translation-function program
inferredcites →https://doi.org/10.1107/s0021889898010656openalex-snapshot
Implementation of a six-dimensional search using theAMoRetranslation function for difficult molecular-replacement problems
inferredcites →https://doi.org/10.1107/s0108767384000544openalex-snapshot
Improvement of protein phases by coarse model modification
inferredcites →https://doi.org/10.1107/s0108767384001343openalex-snapshot
Exact random-walk models in crystallographic statistics. I. Space groupsP\overline{1} andP1
inferredcites →https://doi.org/10.1107/s0108767386099622openalex-snapshot
Improved Fourier coefficients for maps using phases from partial structures with errors
inferredcites →https://doi.org/10.1107/s0108767389009815openalex-snapshot
The molecular replacement method
inferredcites →https://doi.org/10.1107/s0108767390005529openalex-snapshot
Structure-factor probabilities for related structures
inferredcites →https://doi.org/10.1107/s0108767393007597openalex-snapshot
AMoRe: an automated package for molecular replacement
inferredcites →https://doi.org/10.1107/s0108767396004370openalex-snapshot
Improved Structure Refinement Through Maximum Likelihood
inferredcites →https://doi.org/10.1107/s0365110x58001456openalex-snapshot
Joint probability distribution of structure factors and the phase problem
inferredcites →https://doi.org/10.1107/s0365110x59002316openalex-snapshot
The distribution of phase angles for structures containing heavy atoms. II. A modification of the normal heavy-atom method for non-centrosymmetrical structures
inferredcites →https://doi.org/10.1107/s0365110x62000067openalex-snapshot
The detection of sub-units within the crystallographic asymmetric unit
inferredcites →https://doi.org/10.1107/s0567739470001298openalex-snapshot
A new method for phase determination. The `maximum determinant rule'
inferredcites →https://doi.org/10.2307/2531616openalex-snapshot
Applied Multivariate Statistical Analysis.
inferredcites →https://doi.org/10.2307/2533879openalex-snapshot
Applied Multivariate Statistical Analysis.
inferredcites →https://doi.org/10.5860/choice.28-0973openalex-snapshot
Introduction to crystallography
inferredcites →https://doi.org/10.5860/choice.34-0313openalex-snapshot
Introduction to crystallographic statistics

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Protein Structure Analysis: High-throughput Approaches
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inferred← citeshttps://doi.org/10.1002/prot.22229openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/prot.22383openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/prot.22536openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/prot.22568openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/prot.22577openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/prot.22857openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/prot.23043openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/prot.24042openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/prot.24290openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/prot.24377openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/prot.24517openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/prot.24812openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/prot.25996openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/prot.26593openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/978-1-4020-6316-9_8openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/978-1-4939-6598-4_5openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/978-1-4939-7000-1_18openalex-snapshot
Acknowledging Errors: Advanced Molecular Replacement with Phaser
inferred← citeshttps://doi.org/10.1007/978-1-60327-058-8_28openalex-snapshot
Automated Structure Solution with the PHENIX Suite
inferred← citeshttps://doi.org/10.1007/978-1-60761-244-5_3openalex-snapshot
X-Ray Crystallography in Drug Discovery
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Computational Tools in Protein Crystallography
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inferred← citeshttps://doi.org/10.1007/978-3-319-05275-5_1openalex-snapshot
Structure Elucidation of Natural Compounds by X-Ray Crystallography
inferred← citeshttps://doi.org/10.1007/978-3-540-73400-0_80openalex-snapshot
Solving Protein Structures Using Molecular Replacement Via Protein Fragments
inferred← citeshttps://doi.org/10.1007/978-94-007-6232-9_11openalex-snapshot
Extending the Reach of Molecular Replacement
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inferred← citeshttps://doi.org/10.1007/s00775-006-0104-yopenalex-snapshot
The first crystal structure of class III superoxide reductase from Treponema pallidum
inferred← citeshttps://doi.org/10.1007/s00894-011-0976-9openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/s10529-013-1354-8openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/s10969-012-9129-3openalex-snapshot
phenix.mr_rosetta: molecular replacement and model rebuilding with Phenix and Rosetta
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inferred← citeshttps://doi.org/10.1007/s11120-017-0425-4openalex-snapshot
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A protective human antibody against respiratory syncytial virus by targeting a prefusion epitope across sites IV and V of the viral fusion glycoprotein
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Crystal structures of RNA-dependent RNA polymerases from Jingmen tick virus and Alongshan virus
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High-resolution crystal structure of human coronavirus HKU1 receptor binding domain bound to TMPRSS2 receptor
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When molecular replacement has no trivial solution: The importance of model editing in human S100Z X-ray structure solution
inferred← citeshttps://doi.org/10.1016/j.ijbiomac.2023.127634openalex-snapshot
Structural and biological insights into outer membrane protein lipotoxin F of Pseudomonas aeruginosa: Implications for vaccine application
inferred← citeshttps://doi.org/10.1016/j.ijbiomac.2025.142570openalex-snapshot
Molecular basis of two broad-spectrum antibodies neutralizing rabies virus and other phylogroup-I lyssaviruses by blocking structural transition between the pleckstrin-homology and fusion domains in the glycoprotein
inferred← citeshttps://doi.org/10.1016/j.ijbiomac.2025.148466openalex-snapshot
Structural characterization of Pseudomonas aeruginosa flagellar hook FlgE reveals a novel β-hairpin element involved in inflammatory modulation
inferred← citeshttps://doi.org/10.1016/j.ijbiomac.2025.149749openalex-snapshot
Modification of a SARS-CoV-2 spike-RBD targeting nanobody for pH-dependent binding and its chromatographic engineering for purification of WT and variant S-RBDs with mild elution conditions
inferred← citeshttps://doi.org/10.1016/j.immuni.2007.11.008openalex-snapshot
Structures of T Cell Immunoglobulin Mucin Protein 4 Show a Metal-Ion-Dependent Ligand Binding Site where Phosphatidylserine Binds
inferred← citeshttps://doi.org/10.1016/j.immuni.2008.11.011openalex-snapshot
The Shaping of T Cell Receptor Recognition by Self-Tolerance
inferred← citeshttps://doi.org/10.1016/j.immuni.2017.10.013openalex-snapshot
A T Cell Receptor Locus Harbors a Malaria-Specific Immune Response Gene
inferred← citeshttps://doi.org/10.1016/j.isci.2021.103190openalex-snapshot
Structural insights into the cis and trans assembly of human trophoblast cell surface antigen 2
inferred← citeshttps://doi.org/10.1016/j.jbc.2021.100593openalex-snapshot
PIM-induced phosphorylation of Notch3 promotes breast cancer tumorigenicity in a CSL-independent fashion
inferred← citeshttps://doi.org/10.1016/j.jbc.2023.105198openalex-snapshot
Catalytic process of anhydro-N-acetylmuramic acid kinase from Pseudomonas aeruginosa
inferred← citeshttps://doi.org/10.1016/j.jbc.2026.113416openalex-snapshot
A pivoting histidine domain mediates phosphate transfer in glucan water dikinase
inferred← citeshttps://doi.org/10.1016/j.jbiosc.2021.02.008openalex-snapshot
Structures of two novel crystal forms of Aspergillus oryzae alpha amylase (taka-amylase)
inferred← citeshttps://doi.org/10.1016/j.jinorgbio.2011.04.001openalex-snapshot
Structural and thermodynamic characterization of the adrenodoxin-like domain of the electron-transfer protein Etp1 from Schizosaccharomyces pombe
inferred← citeshttps://doi.org/10.1016/j.jmb.2003.09.008openalex-snapshot
Structural Determinants of Metal Specificity in the Zinc Transport Protein ZnuA from Synechocystis 6803
inferred← citeshttps://doi.org/10.1016/j.jmb.2003.09.051openalex-snapshot
Crystal Structure of the N-terminal Dimerisation Domain of VicH, the H-NS-like Protein of Vibrio cholerae
inferred← citeshttps://doi.org/10.1016/j.jmb.2004.03.022openalex-snapshot
Crystal Structure of the Oxidized Form of the Periplasmic Mercury-binding Protein MerP from Ralstonia metallidurans CH34
inferred← citeshttps://doi.org/10.1016/j.jmb.2004.07.014openalex-snapshot
The Structure of MBL-associated Serine Protease-2 Reveals that Identical Substrate Specificities of C1s and MASP-2 are Realized Through Different Sets of Enzyme–Substrate Interactions
inferred← citeshttps://doi.org/10.1016/j.jmb.2004.11.070openalex-snapshot
Conformational Diversity in NAD(H) and Interacting Transhydrogenase Nicotinamide Nucleotide Binding Domains
inferred← citeshttps://doi.org/10.1016/j.jmb.2005.07.041openalex-snapshot
Crystal Structure of 6-Hydroxy-d-nicotine Oxidase from Arthrobacter nicotinovorans
inferred← citeshttps://doi.org/10.1016/j.jmb.2005.10.030openalex-snapshot
Crystal Structure of Penicillin-binding Protein 1a (PBP1a) Reveals a Mutational Hotspot Implicated in β-Lactam Resistance in Streptococcus pneumoniae
inferred← citeshttps://doi.org/10.1016/j.jmb.2005.11.063openalex-snapshot
Crystal Structure of Peach Pru p 3, the Prototypic Member of the Family of Plant Non-specific Lipid Transfer Protein Pan-allergens
inferred← citeshttps://doi.org/10.1016/j.jmb.2006.03.035openalex-snapshot
The First Holocomplex Structure of Ribonucleotide Reductase Gives New Insight into its Mechanism of Action
inferred← citeshttps://doi.org/10.1016/j.jmb.2006.04.013openalex-snapshot
Structure and Reaction Mechanism of l-Rhamnulose Kinase from Escherichia coli
inferred← citeshttps://doi.org/10.1016/j.jmb.2006.08.084openalex-snapshot
Elucidation of Human Choline Kinase Crystal Structures in Complex with the Products ADP or Phosphocholine
inferred← citeshttps://doi.org/10.1016/j.jmb.2006.11.037openalex-snapshot
The Crystal Structures of Human Calpains 1 and 9 Imply Diverse Mechanisms of Action and Auto-inhibition
inferred← citeshttps://doi.org/10.1016/j.jmb.2007.02.009openalex-snapshot
Structural Basis for the Aldolase and Epimerase Activities of Staphylococcus aureus Dihydroneopterin Aldolase
inferred← citeshttps://doi.org/10.1016/j.jmb.2007.02.070openalex-snapshot
Structural Basis of Aquaporin Inhibition by Mercury
inferred← citeshttps://doi.org/10.1016/j.jmb.2007.03.004openalex-snapshot
Structural Basis for a High Affinity Inhibitor Bound to Protein Kinase MK2
inferred← citeshttps://doi.org/10.1016/j.jmb.2007.04.032openalex-snapshot
Structure of Calcineurin in Complex with PVIVIT Peptide: Portrait of a Low-affinity Signalling Interaction
inferred← citeshttps://doi.org/10.1016/j.jmb.2007.05.036openalex-snapshot
Crystal Structure of Medicago truncatula UGT85H2 – Insights into the Structural Basis of a Multifunctional (Iso)flavonoid Glycosyltransferase
inferred← citeshttps://doi.org/10.1016/j.jmb.2007.06.049openalex-snapshot
Biophysical Properties of γC-Crystallin in Human and Mouse Eye Lens: The Role of Molecular Dipoles
inferred← citeshttps://doi.org/10.1016/j.jmb.2007.07.054openalex-snapshot
Insights from Atomic-Resolution X-Ray Structures of Chemically Synthesized HIV-1 Protease in Complex with Inhibitors
inferred← citeshttps://doi.org/10.1016/j.jmb.2007.08.002openalex-snapshot
Molecular Mechanism of the Redox-dependent Interaction between NADH-dependent Ferredoxin Reductase and Rieske-type [2Fe-2S] Ferredoxin
inferred← citeshttps://doi.org/10.1016/j.jmb.2007.08.048openalex-snapshot
Molecular Cloning, Characterisation and Ligand-bound Structure of an Azoreductase from Pseudomonas aeruginosa
inferred← citeshttps://doi.org/10.1016/j.jmb.2007.08.051openalex-snapshot
Structural, Biochemical, and in Vivo Characterization of the First Virally Encoded Cyclophilin from the Mimivirus
inferred← citeshttps://doi.org/10.1016/j.jmb.2007.09.061openalex-snapshot
Structure of the Chloroplast Signal Recognition Particle (SRP) Receptor: Domain Arrangement Modulates SRP–Receptor Interaction
inferred← citeshttps://doi.org/10.1016/j.jmb.2007.10.019openalex-snapshot
Divergence of Cofactor Recognition across Evolution: Coenzyme A Binding in a Prokaryotic Arylamine N-Acetyltransferase
inferred← citeshttps://doi.org/10.1016/j.jmb.2008.01.088openalex-snapshot
Molecular Determinants of Substrate Specificity in Plant 5′-Methylthioadenosine Nucleosidases
inferred← citeshttps://doi.org/10.1016/j.jmb.2008.02.011openalex-snapshot
The Crystal Structure of β-Alanine Synthase from Drosophila melanogaster Reveals a Homooctameric Helical Turn-Like Assembly
inferred← citeshttps://doi.org/10.1016/j.jmb.2008.03.077openalex-snapshot
Thioredoxin A Active-Site Mutants Form Mixed Disulfide Dimers That Resemble Enzyme–Substrate Reaction Intermediates
inferred← citeshttps://doi.org/10.1016/j.jmb.2008.04.070openalex-snapshot
Ribonuclease A Homologues of the Zebrafish: Polymorphism, Crystal Structures of Two Representatives and their Evolutionary Implications
inferred← citeshttps://doi.org/10.1016/j.jmb.2008.05.009openalex-snapshot
Structure of an Fab–Protease Complex Reveals a Highly Specific Non-canonical Mechanism of Inhibition
inferred← citeshttps://doi.org/10.1016/j.jmb.2008.05.034openalex-snapshot
Structural and Mutational Analyses of the Interaction between the Barley α-Amylase/Subtilisin Inhibitor and the Subtilisin Savinase Reveal a Novel Mode of Inhibition
inferred← citeshttps://doi.org/10.1016/j.jmb.2008.09.028openalex-snapshot
Structure of Bacterial Glutathione-S-Transferase Maleyl Pyruvate Isomerase and Implications for Mechanism of Isomerisation
inferred← citeshttps://doi.org/10.1016/j.jmb.2008.09.076openalex-snapshot
Crystal Structure of Vascular Endothelial Growth Factor-B in Complex with a Neutralising Antibody Fab Fragment
inferred← citeshttps://doi.org/10.1016/j.jmb.2008.10.037openalex-snapshot
Kinetic and X-Ray Structural Evidence for Negative Cooperativity in Substrate Binding to Nicotinate Mononucleotide Adenylyltransferase (NMAT) from Bacillus anthracis
inferred← citeshttps://doi.org/10.1016/j.jmb.2008.10.055openalex-snapshot
Structural Aspects of the Distinct Biochemical Properties of Glutaredoxin 1 and Glutaredoxin 2 from Saccharomyces cerevisiae
inferred← citeshttps://doi.org/10.1016/j.jmb.2008.11.026openalex-snapshot
Structure of West Nile Virus NS3 Protease: Ligand Stabilization of the Catalytic Conformation
inferred← citeshttps://doi.org/10.1016/j.jmb.2008.12.001openalex-snapshot
Structure of PBP-A from Thermosynechococcus elongatus, a Penicillin-Binding Protein Closely Related to Class A β-Lactamases
inferred← citeshttps://doi.org/10.1016/j.jmb.2008.12.004openalex-snapshot
Structural Basis of Heme Binding in the Cu,Zn Superoxide Dismutase from Haemophilus ducreyi
inferred← citeshttps://doi.org/10.1016/j.jmb.2008.12.031openalex-snapshot
PknB-Mediated Phosphorylation of a Novel Substrate, N-Acetylglucosamine-1-Phosphate Uridyltransferase, Modulates Its Acetyltransferase Activity
inferred← citeshttps://doi.org/10.1016/j.jmb.2009.02.002openalex-snapshot
Structural Basis for the Tumor Cell Apoptosis-Inducing Activity of an Antitumor Lectin from the Edible Mushroom Agrocybe aegerita
inferred← citeshttps://doi.org/10.1016/j.jmb.2009.02.024openalex-snapshot
PBP Active Site Flexibility as the Key Mechanism for β-Lactam Resistance in Pneumococci
inferred← citeshttps://doi.org/10.1016/j.jmb.2009.03.011openalex-snapshot
Crystal Structures of the Histo-Aspartic Protease (HAP) from Plasmodium falciparum
inferred← citeshttps://doi.org/10.1016/j.jmb.2009.03.039openalex-snapshot
The pKa Values of Acidic and Basic Residues Buried at the Same Internal Location in a Protein Are Governed by Different Factors
inferred← citeshttps://doi.org/10.1016/j.jmb.2009.03.056openalex-snapshot
Identification and Structural Analysis of a Novel Carboxysome Shell Protein with Implications for Metabolite Transport
inferred← citeshttps://doi.org/10.1016/j.jmb.2009.03.076openalex-snapshot
Epitope Mapping of Anti-Interleukin-13 Neutralizing Antibody CNTO607
inferred← citeshttps://doi.org/10.1016/j.jmb.2009.06.074openalex-snapshot
Structural Insights into Antibody Recognition of Mycobacterial Polysaccharides
inferred← citeshttps://doi.org/10.1016/j.jmb.2009.08.017openalex-snapshot
Crystal Structures of Glycosyltransferase UGT78G1 Reveal the Molecular Basis for Glycosylation and Deglycosylation of (Iso)flavonoids
inferred← citeshttps://doi.org/10.1016/j.jmb.2009.08.061openalex-snapshot
Structural Evaluation of Potent NKT Cell Agonists: Implications for Design of Novel Stimulatory Ligands
inferred← citeshttps://doi.org/10.1016/j.jmb.2009.09.059openalex-snapshot
Structural and Thermodynamic Characterization of Pre- and Postpolymerization States in the F4 Fimbrial Subunit FaeG
inferred← citeshttps://doi.org/10.1016/j.jmb.2010.01.015openalex-snapshot
Insights into Higher-Order Organization of the Cellulosome Revealed by a Dissect-and-Build Approach: Crystal Structure of Interacting Clostridium thermocellum Multimodular Components
inferred← citeshttps://doi.org/10.1016/j.jmb.2010.01.032openalex-snapshot
Molecular Determinants of PAM2 Recognition by the MLLE Domain of Poly(A)-Binding Protein
inferred← citeshttps://doi.org/10.1016/j.jmb.2010.01.076openalex-snapshot
Structure of Bacteriophage T4 Endonuclease II Mutant E118A, a Tetrameric GIY-YIG Enzyme
inferred← citeshttps://doi.org/10.1016/j.jmb.2010.03.004openalex-snapshot
Human Framework Adaptation of a Mouse Anti-Human IL-13 Antibody
inferred← citeshttps://doi.org/10.1016/j.jmb.2010.03.064openalex-snapshot
The Crystal Structure of the Active Form of the C-Terminal Kinase Domain of Mitogen- and Stress-Activated Protein Kinase 1
inferred← citeshttps://doi.org/10.1016/j.jmb.2010.04.022openalex-snapshot
Structural and Functional Characterization of Reston Ebola Virus VP35 Interferon Inhibitory Domain
inferred← citeshttps://doi.org/10.1016/j.jmb.2010.04.023openalex-snapshot
A Novel Mechanism for Azoreduction
inferred← citeshttps://doi.org/10.1016/j.jmb.2010.07.027openalex-snapshot
Structure of the Complex between HER2 and an Antibody Paratope Formed by Side Chains from Tryptophan and Serine
inferred← citeshttps://doi.org/10.1016/j.jmb.2010.08.009openalex-snapshot
Coevolution of Antibody Stability and Vκ CDR-L3 Canonical Structure
inferred← citeshttps://doi.org/10.1016/j.jmb.2010.09.002openalex-snapshot
Kinetic, Thermodynamic, and Structural Insight into the Mechanism of Phosphopantetheine Adenylyltransferase from Mycobacterium tuberculosis
inferred← citeshttps://doi.org/10.1016/j.jmb.2010.12.015openalex-snapshot
Crystal Structure of SUMO-Modified Proliferating Cell Nuclear Antigen
inferred← citeshttps://doi.org/10.1016/j.jmb.2011.07.043openalex-snapshot
Structural Characterization and Membrane Localization of ExsB from the Type III Secretion System (T3SS) of Pseudomonas aeruginosa
inferred← citeshttps://doi.org/10.1016/j.jmb.2011.11.036openalex-snapshot
A Reverse Binding Motif That Contributes to Specific Protease Inhibition by Antibodies
inferred← citeshttps://doi.org/10.1016/j.jmb.2012.01.015openalex-snapshot
Structural, Bioinformatic, and In Vivo Analyses of Two Treponema pallidum Lipoproteins Reveal a Unique TRAP Transporter
inferred← citeshttps://doi.org/10.1016/j.jmb.2012.04.001openalex-snapshot
Structural and Thermodynamic Characterization of the Interaction between Two Periplasmic Treponema pallidum Lipoproteins that are Components of a TPR-Protein-Associated TRAP Transporter (TPAT)
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