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Case study: visualizing sets of evolutionary trees
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1007/3-540-37623-2_30openalex-snapshot
Drawing Large Graphs with H3Viewer and Site Manager
inferredcites →https://doi.org/10.1007/978-1-4757-2711-1openalex-snapshot
Modern Multidimensional Scaling
inferredcites →https://doi.org/10.1007/bf01908061openalex-snapshot
Optimal algorithms for comparing trees with labeled leaves
inferredcites →https://doi.org/10.1007/s00026-001-8006-8openalex-snapshot
Subtree Transfer Operations and Their Induced Metrics on Evolutionary Trees
inferredcites →https://doi.org/10.1016/0025-5564(81)90043-2openalex-snapshot
Comparison of phylogenetic trees
inferredcites →https://doi.org/10.1080/10618600.1996.10474696openalex-snapshot
Interactive High-Dimensional Data Visualization
inferredcites →https://doi.org/10.1080/10618600.1998.10474764openalex-snapshot
XGobi: Interactive Dynamic Data Visualization in the X Window System
inferredcites →https://doi.org/10.1093/bioinformatics/12.4.357openalex-snapshot
Tree View: An application to display phylogenetic trees on personal computers
inferredcites →https://doi.org/10.1109/visual.1993.398870openalex-snapshot
Navigating large networks with hierarchies
inferredcites →https://doi.org/10.1109/visual.1996.567787openalex-snapshot
A linear iteration time layout algorithm for visualising high-dimensional data
inferredcites →https://doi.org/10.1145/102377.115768openalex-snapshot
Tree visualization with tree-maps
inferredcites →https://doi.org/10.5555/244979.245035openalex-snapshot
A linear iteration time layout algorithm for visualising high-dimensional data
inferredcites →https://doi.org/10.5555/949845.949884openalex-snapshot
Navigating large networks with hierarchies
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
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BUBBLE TREE DRAWING ALGORITHM
inferred← citeshttps://doi.org/10.1007/11732990_19openalex-snapshot
A Sublinear-Time Randomized Approximation Scheme for the Robinson-Foulds Metric
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Large-Scale Multiple Sequence Alignment and Tree Estimation Using SATé
inferred← citeshttps://doi.org/10.1007/978-3-319-16348-2_5openalex-snapshot
Quantification and Visualization of Variation in Anatomical Trees
inferred← citeshttps://doi.org/10.1007/978-3-540-31843-9_51openalex-snapshot
An Interactive Multi-user System for Simultaneous Graph Drawing
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Consensus Networks: A Method for Visualising Incompatibilities in Collections of Trees
inferred← citeshttps://doi.org/10.1007/978-3-540-39763-2_17openalex-snapshot
A Linear-Time Majority Tree Algorithm
inferred← citeshttps://doi.org/10.1007/978-3-540-71618-1_78openalex-snapshot
Clustering of Leaf-Labelled Trees
inferred← citeshttps://doi.org/10.1007/978-3-540-73451-2_77openalex-snapshot
Clustering of Leaf-Labelled Trees on Free Leafset
inferred← citeshttps://doi.org/10.1007/978-3-540-78757-0_9openalex-snapshot
Frequent Subsplit Representation of Leaf-Labelled Trees
inferred← citeshttps://doi.org/10.1007/978-3-540-79721-0_81openalex-snapshot
Phylogenetic Trees Dissimilarity Measure Based on Strict Frequent Splits Set and Its Application for Clustering
inferred← citeshttps://doi.org/10.1007/978-3-642-04241-6_27openalex-snapshot
Visualizing Phylogenetic Treespace Using Cartographic Projections
inferred← citeshttps://doi.org/10.1007/978-3-642-04241-6_32openalex-snapshot
A Unifying View on Approximation and FPT of Agreement Forests
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Approximating geodesic tree distance
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A Multi-comparable visual analytic approach for complex hierarchical data
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Discovering temporal changes in hierarchical transportation data: Visual analytics & text reporting tools
inferred← citeshttps://doi.org/10.1016/j.ympev.2010.07.003openalex-snapshot
Evolutionary history and taxonomy of a short-horned grasshopper subfamily: The Melanoplinae (Orthoptera: Acrididae)
inferred← citeshttps://doi.org/10.1016/j.ympev.2013.09.009openalex-snapshot
Inside the Melanoplinae: New molecular evidence for the evolutionary history of the Eurasian Podismini (Orthoptera: Acrididae)
inferred← citeshttps://doi.org/10.1017/cbo9781139095112openalex-snapshot
Bayesian Evolutionary Analysis with BEAST
inferred← citeshttps://doi.org/10.1057/ivs.2009.29openalex-snapshot
A Survey of Multiple Tree Visualisation
inferred← citeshttps://doi.org/10.1057/palgrave.ivs.9500069openalex-snapshot
A Pivot-Based Routine for Improved Parent-Finding in Hybrid MDS
inferred← citeshttps://doi.org/10.1057/palgrave.ivs.9500096openalex-snapshot
Extending Taxonomic Visualisation to Incorporate Synonymy and Structural Markers
inferred← citeshttps://doi.org/10.1080/10635150490423520openalex-snapshot
The Importance of Proper Model Assumption in Bayesian Phylogenetics
inferred← citeshttps://doi.org/10.1080/10635150590946961openalex-snapshot
Analysis and Visualization of Tree Space
inferred← citeshttps://doi.org/10.1080/10635150601089001openalex-snapshot
Nematode Small Subunit Phylogeny Correlates with Alignment Parameters
inferred← citeshttps://doi.org/10.1080/19331681.2026.2646990openalex-snapshot
Beyond partisan leaning: a comparative analysis of political bias in large language models
inferred← citeshttps://doi.org/10.1089/cmb.2006.13.1419openalex-snapshot
Approximating Subtree Distances Between Phylogenies
inferred← citeshttps://doi.org/10.1089/cmb.2012.0243openalex-snapshot
MASTtreedist: Visualization of Tree Space Based on Maximum Agreement Subtree
inferred← citeshttps://doi.org/10.1093/bib/bbt038openalex-snapshot
Fighting against uncertainty: an essential issue in bioinformatics
inferred← citeshttps://doi.org/10.1093/bioinformatics/btn038openalex-snapshot
Interactive visualization software for exploring phylogenetic trees and clades
inferred← citeshttps://doi.org/10.1093/biostatistics/kxad025openalex-snapshot
Analyzing microbial evolution through gene and genome phylogenies
inferred← citeshttps://doi.org/10.1093/molbev/msw124openalex-snapshot
Mapping Phylogenetic Trees to Reveal Distinct Patterns of Evolution
inferred← citeshttps://doi.org/10.1093/sysbio/syab100openalex-snapshot
Robust Analysis of Phylogenetic Tree Space
inferred← citeshttps://doi.org/10.1093/sysbio/syu078openalex-snapshot
The Effects of Inference Method, Population Sampling, and Gene Sampling on Species Tree Inferences: An Empirical Study in Slender Salamanders (Plethodontidae: Batrachoseps)
inferred← citeshttps://doi.org/10.1093/sysbio/syu105openalex-snapshot
Consensus and Confusion in Molluscan Trees: Evaluating Morphological and Molecular Phylogenies
inferred← citeshttps://doi.org/10.1101/251710openalex-snapshot
Comparing phylogenetic trees according to tip label categories
inferred← citeshttps://doi.org/10.1109/cscloud.2015.47openalex-snapshot
An Approach to Minimize Crossings in Phylogenetic Trees
inferred← citeshttps://doi.org/10.1109/infvis.2003.1249012openalex-snapshot
Improving hybrid MDS with pivot-based searching
inferred← citeshttps://doi.org/10.1109/infvis.2004.60openalex-snapshot
Steerable, Progressive Multidimensional Scaling
inferred← citeshttps://doi.org/10.1109/mcg.2009.22openalex-snapshot
Defining Insight for Visual Analytics
inferred← citeshttps://doi.org/10.1109/tevc.2015.2395091openalex-snapshot
Evolutionary Nonlinear Projection
inferred← citeshttps://doi.org/10.1109/tvcg.2013.231openalex-snapshot
Visualizing Change over Time Using Dynamic Hierarchies: TreeVersity2 and the StemView
inferred← citeshttps://doi.org/10.1109/tvcg.2017.2744080openalex-snapshot
How Do Ancestral Traits Shape Family Trees Over Generations?
inferred← citeshttps://doi.org/10.1109/tvcg.2019.2934535openalex-snapshot
BarcodeTree: Scalable Comparison of Multiple Hierarchies
inferred← citeshttps://doi.org/10.1109/tvcg.2021.3129414openalex-snapshot
Scalable Comparative Visualization of Ensembles of Call Graphs
inferred← citeshttps://doi.org/10.1109/ultravis.2008.5154061openalex-snapshot
An outlook into ultra-scale visualization of large-scale biological data
inferred← citeshttps://doi.org/10.1109/vizsec60606.2023.00008openalex-snapshot
Visualizing Comparisons of Bill of Materials
inferred← citeshttps://doi.org/10.1111/1755-0998.12676openalex-snapshot
treespace : Statistical exploration of landscapes of phylogenetic trees
inferred← citeshttps://doi.org/10.1111/nph.14530openalex-snapshot
Conflicting phylogenomic signals reveal a pattern of reticulate evolution in a recent high‐Andean diversification (Asteraceae: Astereae:Diplostephium)
inferred← citeshttps://doi.org/10.1145/1268517.1268563openalex-snapshot
Visualization and exploration of time-varying medical image data sets
inferred← citeshttps://doi.org/10.1145/1377966.1377971openalex-snapshot
Understanding and characterizing insights
inferred← citeshttps://doi.org/10.1145/2661735.2661736openalex-snapshot
Visualising evolutionary search spaces
inferred← citeshttps://doi.org/10.1177/1473871611416549openalex-snapshot
Visual comparison for information visualization
inferred← citeshttps://doi.org/10.1186/1471-2105-7-439openalex-snapshot
TreeDyn: towards dynamic graphics and annotations for analyses of trees
inferred← citeshttps://doi.org/10.1186/1748-7188-5-26openalex-snapshot
On the use of cartographic projections in visualizing phylo-genetic tree space
inferred← citeshttps://doi.org/10.1186/s12859-017-1479-1openalex-snapshot
Visualizing phylogenetic tree landscapes
inferred← citeshttps://doi.org/10.1214/17-sts637openalex-snapshot
Estimating Transmission from Genetic and Epidemiological Data: A Metric to Compare Transmission Trees
inferred← citeshttps://doi.org/10.1371/journal.pone.0287350openalex-snapshot
Geodesics to characterize the phylogenetic landscape
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Minimising branch crossings in phylogenetic trees
inferred← citeshttps://doi.org/10.31390/gradschool_dissertations.5415openalex-snapshot
Quantifying Structure and Variation in Complex Phylogenetic Data
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HCMapper: An interactive visualization tool to compare partition-based flat clustering extracted from pairs of dendrograms
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Visual triangulation of network-based phylogenetic trees
inferred← citeshttps://doi.org/10.7287/peerj.12418v0.1/reviews/1openalex-snapshot
Peer Review #1 of "Phylogeny of Crataegus (Rosaceae) based on 257 nuclear loci and chloroplast genomes: evaluating the impact of hybridization (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.12418v0.1/reviews/2openalex-snapshot
Peer Review #2 of "Phylogeny of Crataegus (Rosaceae) based on 257 nuclear loci and chloroplast genomes: evaluating the impact of hybridization (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.12418v0.2/reviews/1openalex-snapshot
Peer Review #1 of "Phylogeny of Crataegus (Rosaceae) based on 257 nuclear loci and chloroplast genomes: evaluating the impact of hybridization (v0.2)"
inferred← citeshttps://doi.org/10.7717/peerj.12418openalex-snapshot
Phylogeny of Crataegus (Rosaceae) based on 257 nuclear loci and chloroplast genomes: evaluating the impact of hybridization
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