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S trath E2E2: An r package for modelling the dynamics of marine food webs and fisheries

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Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/ece3.3216openalex-snapshot
Influence of density‐dependent competition on foraging and migratory behavior of a subtropical colonial seabird
inferredcites →https://doi.org/10.1016/0304-3800(87)90030-5openalex-snapshot
Aggregation in model ecosystems. I. Perfect aggregation
inferredcites →https://doi.org/10.1016/j.ecolmodel.2003.09.003openalex-snapshot
Ecopath with Ecosim: methods, capabilities and limitations
inferredcites →https://doi.org/10.1016/j.envsoft.2016.02.008openalex-snapshot
Sensitivity analysis of environmental models: A systematic review with practical workflow
inferredcites →https://doi.org/10.1016/j.fishres.2010.09.023openalex-snapshot
A length-structured partial ecosystem model for cod in the North Sea
inferredcites →https://doi.org/10.1016/j.jmarsys.2009.12.012openalex-snapshot
Approaches to end-to-end ecosystem models
inferredcites →https://doi.org/10.1016/j.pocean.2012.03.004openalex-snapshot
Ecosystem limits to food web fluxes and fisheries yields in the North Sea simulated with an end-to-end food web model
inferredcites →https://doi.org/10.1016/j.pocean.2015.01.016openalex-snapshot
Aggregation in ecosystem models and model stability
inferredcites →https://doi.org/10.1016/j.softx.2018.06.004openalex-snapshot
Ecosampler: A new approach to assessing parameter uncertainty in Ecopath with Ecosim
inferredcites →https://doi.org/10.1016/s0169-5347(99)01723-1openalex-snapshot
Trophic cascades revealed in diverse ecosystems
inferredcites →https://doi.org/10.1016/s0378-4754(00)00270-6openalex-snapshot
Global sensitivity indices for nonlinear mathematical models and their Monte Carlo estimates
inferredcites →https://doi.org/10.1029/jc083ic09p04615openalex-snapshot
Tidal fronts on the shelf seas around the British Isles
inferredcites →https://doi.org/10.1080/00401706.1991.10484804openalex-snapshot
Factorial Sampling Plans for Preliminary Computational Experiments
inferredcites →https://doi.org/10.1098/rsif.2012.1018openalex-snapshot
Sensitivity analysis of infectious disease models: methods, advances and their application
inferredcites →https://doi.org/10.1111/2041-210x.12256openalex-snapshot
mizer : an R package for multispecies, trait‐based and community size spectrum ecological modelling
inferredcites →https://doi.org/10.1111/2041-210x.13272openalex-snapshot
Atlantis : A spatially explicit end‐to‐end marine ecosystem model with dynamically integrated physics, ecology and socio‐economic modules
inferredcites →https://doi.org/10.1111/ele.12200openalex-snapshot
Understanding patterns and processes in models of trophic cascades
inferredcites →https://doi.org/10.1371/journal.pone.0138016openalex-snapshot
Predation Risk Perception, Food Density and Conspecific Cues Shape Foraging Decisions in a Tropical Lizard
inferredcites →https://doi.org/10.18637/jss.v033.i09openalex-snapshot
Solving Differential Equations in R : Package deSolve
inferredcites →https://doi.org/10.1890/13-1446.1openalex-snapshot
Competition, predation, and migration: individual choice patterns of Serengeti migrants captured by hierarchical models
inferredcites →https://doi.org/10.32614/r.manualsopenalex-snapshot
R: A Language and Environment for Statistical Computing

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1111/jfb.15773zenodo-depositor-declared
We need to talk about the role of zooplankton in marine food webs
inferred← citeshttps://doi.org/10.1002/2688-8319.70039openalex-snapshot
Fishing, offshore wind energy, climate change and marine spatial planning: Is it possible to plan for a best use of space?
inferred← citeshttps://doi.org/10.1007/s13280-021-01616-9openalex-snapshot
Ecosystem approach to harvesting in the Arctic: Walking the tightrope between exploitation and conservation in the Barents Sea
inferred← citeshttps://doi.org/10.1016/j.ecoinf.2025.103510openalex-snapshot
Propagating uncertainty from physical and biogeochemical drivers through to top predators in dynamic Bayesian ecosystem models improves predictions
inferred← citeshttps://doi.org/10.1016/j.ecolind.2023.110735openalex-snapshot
Ecological network-based food web dynamic model provides an aquatic population restoration strategy
inferred← citeshttps://doi.org/10.1016/j.ecolind.2023.110984openalex-snapshot
Can we use recovery timescales to define Good Environmental Status?
inferred← citeshttps://doi.org/10.1016/j.ecolmodel.2024.110990openalex-snapshot
A protocol for implementing parameter sensitivity analyses in complex ecosystem models
inferred← citeshttps://doi.org/10.1016/j.jnc.2025.126983openalex-snapshot
Biodiversity baseline assessment for offshore wind projects: Challenges to implement Ecosystem-Based management
inferred← citeshttps://doi.org/10.1016/j.pocean.2026.103701openalex-snapshot
Challenging one-way fish modelling: two-way coupling reveals critical marine ecosystem dynamics
inferred← citeshttps://doi.org/10.1038/s41559-025-02647-1openalex-snapshot
The complex structure of aquatic food webs emerges from a few assembly rules
inferred← citeshttps://doi.org/10.1093/icesjms/fsag041openalex-snapshot
Seal population recovery and conservation can be reconciled with viable commercial fisheries in the North Sea, although both may be threatened by climate change
inferred← citeshttps://doi.org/10.1093/icesjms/fsag109openalex-snapshot
Data, analyses, and models to support the implementation of ecosystem-based fisheries management in the North Sea
inferred← citeshttps://doi.org/10.1111/faf.12671openalex-snapshot
Exploring the role of Northeast Atlantic cod in the Barents Sea food web using a multi‐model approach
inferred← citeshttps://doi.org/10.1111/fog.12604openalex-snapshot
Combined effects of temperature and fishing mortality on the Barents Sea ecosystem stability
inferred← citeshttps://doi.org/10.1111/fog.12736openalex-snapshot
Climate Change Opens Up New Fishing Possibilities for Large‐Scale Trawling Vessels Off West Greenland
inferred← citeshttps://doi.org/10.1111/gcb.70189openalex-snapshot
Sea‐Ice Retreat From the Northeast Greenland Continental Shelf Triggers a Marine Trophic Cascade
inferred← citeshttps://doi.org/10.11614/ksl.2022.55.4.259openalex-snapshot
Food Web Models in Aquatic Ecosystems: Review
inferred← citeshttps://doi.org/10.32614/cran.package.strathe2e2openalex-snapshot
StrathE2E2: End-to-End Marine Food Web Model
inferred← citeshttps://doi.org/10.3354/meps13870openalex-snapshot
Sustainable fishing can lead to improvements in marine ecosystem status: an ensemble-model forecast of the North Sea ecosystem
inferred← citeshttps://doi.org/10.3354/meps14465openalex-snapshot
Key species and indicators revealed by an uncertainty analysis of the marine ecosystem model OSMOSE
inferred← citeshttps://doi.org/10.3389/fmars.2022.841909openalex-snapshot
The Response of North Sea Ecosystem Functional Groups to Warming and Changes in Fishing
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