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Environmental and biotic drivers of soil microbial β‐diversity across spatial and phylogenetic scales
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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Uneven rate of plant turnover along elevation in grasslands
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A Hump-Backed Trend in Bacterial Diversity with Elevation on Mount Fuji, Japan
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Ectomycorrhizal fungi associated with two species of Kobresia in an alpine meadow in the eastern Himalaya
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Hot Spots of Inorganic Nitrogen Availability in an Alpine-Subalpine Ecosystem, Colorado Front Range
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Mycorrhizal associations and other means of nutrition of vascular plants: understanding the global diversity of host plants by resolving conflicting information and developing reliable means of diagnosis
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Effect of DNA extraction and sample preservation method on rumen bacterial population
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Plant species identities and fertilization influence on arbuscular mycorrhizal fungal colonisation and soil bacterial activities
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Microbiota and Host Nutrition across Plant and Animal Kingdoms
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Scraping the bottom of the barrel: are rare high throughput sequences artifacts?
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Grassland management influences spatial patterns of soil microbial communities
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Going underground: root traits as drivers of ecosystem processes
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The role of arbuscular mycorrhizal fungi and glomalin in soil aggregation: comparing effects of five plant species
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Microbial contributions to climate change through carbon cycle feedbacks
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The role of local environment and geographical distance in determining community composition of arbuscular mycorrhizal fungi at the landscape scale
inferredcites →https://doi.org/10.1038/ismej.2012.22openalex-snapshot
Stochastic and deterministic assembly processes in subsurface microbial communities
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Robust estimation of microbial diversity in theory and in practice
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Fine-scale spatial patterns in bacterial community composition and function within freshwater ponds
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A widespread plant-fungal-bacterial symbiosis promotes plant biodiversity, plant nutrition and seedling recruitment
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Stochastic distribution of small soil eukaryotes resulting from high dispersal and drift in a local environment
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Reconstructing the early evolution of Fungi using a six-gene phylogeny
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Fifty thousand years of Arctic vegetation and megafaunal diet
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Biogeography and habitat modelling of high-alpine bacteria
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Unraveling the processes shaping mammalian gut microbiomes over evolutionary time
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Beyond biogeographic patterns: processes shaping the microbial landscape
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A test of the hierarchical model of litter decomposition
inferredcites →https://doi.org/10.1073/pnas.1016308108openalex-snapshot
Drivers of bacterial β-diversity depend on spatial scale
inferredcites →https://doi.org/10.1073/pnas.1217382110openalex-snapshot
Plant diversity effects on soil food webs are stronger than those of elevated CO 2 and N deposition in a long-term grassland experiment
inferredcites →https://doi.org/10.1086/652373openalex-snapshot
Conceptual Synthesis in Community Ecology
inferredcites →https://doi.org/10.1093/aob/mcv041openalex-snapshot
Modelling snow cover duration improves predictions of functional and taxonomic diversity for alpine plant communities
inferredcites →https://doi.org/10.1093/aobpla/plv030openalex-snapshot
Soil microbial community variation correlates most strongly with plant species identity, followed by soil chemistry, spatial location and plant genus
inferredcites →https://doi.org/10.1093/bioinformatics/btg412openalex-snapshot
APE: Analyses of Phylogenetics and Evolution in R language
inferredcites →https://doi.org/10.1093/jpe/rtm001openalex-snapshot
Studying beta diversity: ecological variation partitioning by multiple regression and canonical analysis
inferredcites →https://doi.org/10.1093/nar/gkl938openalex-snapshot
Power and limitations of the chloroplast trnL (UAA) intron for plant DNA barcoding
inferredcites →https://doi.org/10.1093/nar/gkm864openalex-snapshot
SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
inferredcites →https://doi.org/10.1093/nar/gkn741openalex-snapshot
Database resources of the National Center for Biotechnology Information
inferredcites →https://doi.org/10.1098/rsbl.2014.0562openalex-snapshot
DNA metabarcoding and the cytochrome c oxidase subunit I marker: not a perfect match
inferredcites →https://doi.org/10.1098/rsbl.2015.0408openalex-snapshot
Long-lasting modification of soil fungal diversity associated with the introduction of rabbits to a remote sub-Antarctic archipelago
inferredcites →https://doi.org/10.1111/1365-2745.12658openalex-snapshot
Spatial scale and intraspecific trait variability mediate assembly rules in alpine grasslands
inferredcites →https://doi.org/10.1111/1755-0998.12338openalex-snapshot
Replication levels, false presences and the estimation of the presence/absence from eDNA metabarcoding data
inferredcites →https://doi.org/10.1111/1755-0998.12902openalex-snapshot
“Pitfalls in relative abundance estimation using eDNA metabarcoding”
inferredcites →https://doi.org/10.1111/ecog.01892openalex-snapshot
A network approach for inferring species associations from co‐occurrence data
inferredcites →https://doi.org/10.1111/ele.12381openalex-snapshot
Plant diversity predicts beta but not alpha diversity of soil microbes across grasslands worldwide
inferredcites →https://doi.org/10.1111/ele.12536openalex-snapshot
Relating belowground microbial composition to the taxonomic, phylogenetic, and functional trait distributions of trees in a tropical forest
inferredcites →https://doi.org/10.1111/ele.13143openalex-snapshot
Mapping the imprint of biotic interactions on β‐diversity
inferredcites →https://doi.org/10.1111/geb.12686openalex-snapshot
Phylogenetic scale in ecology and evolution
inferredcites →https://doi.org/10.1111/j.1365-2745.2010.01679.xopenalex-snapshot
Linkages of plant traits to soil properties and the functioning of temperate grassland
inferredcites →https://doi.org/10.1111/j.1365-294x.2011.05317.xopenalex-snapshot
Soil sampling and isolation of extracellular DNA from large amount of starting material suitable for metabarcoding studies
inferredcites →https://doi.org/10.1111/j.1365-294x.2012.05550.xopenalex-snapshot
Bioinformatic challenges for DNA metabarcoding of plants and animals
inferredcites →https://doi.org/10.1111/j.1461-0248.2007.01139.xopenalex-snapshot
The unseen majority: soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems
inferredcites →https://doi.org/10.1111/j.1469-8137.2010.03185.xopenalex-snapshot
Interwoven branches of the plant and fungal trees of life
inferredcites →https://doi.org/10.1111/j.1600-0587.2012.07773.xopenalex-snapshot
Building megaphylogenies for macroecology: taking up the challenge
inferredcites →https://doi.org/10.1111/j.1600-0587.2013.00643.xopenalex-snapshot
The geographic scaling of biotic interactions
inferredcites →https://doi.org/10.1111/j.2041-210x.2012.00261.xopenalex-snapshot
A general and simple method for obtaining R 2 from generalized linear mixed‐effects models
inferredcites →https://doi.org/10.1111/jvs.12031openalex-snapshot
A family of null models to distinguish between environmental filtering and biotic interactions in functional diversity patterns
inferredcites →https://doi.org/10.1111/jvs.12159openalex-snapshot
Spatial scale resolves the niche versus neutral theory debate
inferredcites →https://doi.org/10.1111/mec.12481openalex-snapshot
Towards a unified paradigm for sequence‐based identification of fungi
inferredcites →https://doi.org/10.1111/mec.12854openalex-snapshot
Soil fungal communities of grasslands are environmentally structured at a regional scale in the A lps
inferredcites →https://doi.org/10.1111/mec.12870openalex-snapshot
Genomics of the divergence continuum in an African plant biodiversity hotspot, I: drivers of population divergence in Restio capensis (Restionaceae)
inferredcites →https://doi.org/10.1111/mec.13639openalex-snapshot
Coalescing molecular evolution and DNA barcoding
inferredcites →https://doi.org/10.1111/mec.14350openalex-snapshot
Environmental DNA metabarcoding: Transforming how we survey animal and plant communities
inferredcites →https://doi.org/10.1111/mec.14919openalex-snapshot
Body size determines soil community assembly in a tropical forest
inferredcites →https://doi.org/10.1111/nph.13312openalex-snapshot
The importance of the microbiome of the plant holobiont
inferredcites →https://doi.org/10.1111/nph.14571openalex-snapshot
A worldview of root traits: the influence of ancestry, growth form, climate and mycorrhizal association on the functional trait variation of fine‐root tissues in seed plants
inferredcites →https://doi.org/10.1126/science.aac9323openalex-snapshot
Microbiomes in light of traits: A phylogenetic perspective
inferredcites →https://doi.org/10.1128/aem.02188-07openalex-snapshot
Root Exudates Regulate Soil Fungal Community Composition and Diversity
inferredcites →https://doi.org/10.1128/mmbr.00051-12openalex-snapshot
Patterns and Processes of Microbial Community Assembly
inferredcites →https://doi.org/10.1186/s40168-017-0237-yopenalex-snapshot
Normalization and microbial differential abundance strategies depend upon data characteristics
inferredcites →https://doi.org/10.1198/108571102320openalex-snapshot
Confidence limits for regression relationships between distance matrices: Estimating gene flow with distance
inferredcites →https://doi.org/10.1371/journal.pone.0019950openalex-snapshot
Contrasting Diversity Patterns of Crenarchaeal, Bacterial and Fungal Soil Communities in an Alpine Landscape
inferredcites →https://doi.org/10.1371/journal.pone.0062510openalex-snapshot
Phylogeny of Bacterial and Archaeal Genomes Using Conserved Genes: Supertrees and Supermatrices
inferredcites →https://doi.org/10.1371/journal.pone.0096182openalex-snapshot
Biotic and Abiotic Properties Mediating Plant Diversity Effects on Soil Microbial Communities in an Experimental Grassland
inferredcites →https://doi.org/10.1657/1523-0430(2005)037[0177:domtaa]2.0.co;2openalex-snapshot
Distribution of Mycorrhizal Types among Alpine Vascular Plant Families on the Beartooth Plateau, Rocky Mountains, U.S.A., in Reference to Large-Scale Patterns in Arctic–Alpine Habitats
inferredcites →https://doi.org/10.1890/0012-9658(2006)87[2418:tpapos]2.0.co;2openalex-snapshot
THE PROBLEM AND PROMISE OF SCALE DEPENDENCY IN COMMUNITY PHYLOGENETICS
inferredcites →https://doi.org/10.1890/02-0274openalex-snapshot
HERBIVORE-MEDIATED LINKAGES BETWEEN ABOVEGROUND AND BELOWGROUND COMMUNITIES
inferredcites →https://doi.org/10.1890/06-1736.1openalex-snapshot
PARTITIONING DIVERSITY INTO INDEPENDENT ALPHA AND BETA COMPONENTS
inferredcites →https://doi.org/10.1890/11-1394.1openalex-snapshot
Functional species pool framework to test for biotic effects on community assembly
inferredcites →https://doi.org/10.1890/13-2153.1openalex-snapshot
Effects of species' similarity and dominance on the functional and phylogenetic structure of a plant meta‐community
inferredcites →https://doi.org/10.1890/15-1160.1openalex-snapshot
Plant community and soil chemistry responses to long‐term nitrogen inputs drive changes in alpine bacterial communities
inferredcites →https://doi.org/10.2307/3235676openalex-snapshot
Assembly and response rules: two goals for predictive community ecology
inferredcites →https://doi.org/10.32614/cran.package.taxizeopenalex-snapshot
taxize: Taxonomic Information from Around the Web
inferredcites →https://doi.org/10.3389/fmicb.2013.00064openalex-snapshot
Microbes on the Cliff: Alpine Cushion Plants Structure Bacterial and Fungal Communities
inferredcites →https://doi.org/10.3389/fmicb.2015.01330openalex-snapshot
Structures of Microbial Communities in Alpine Soils: Seasonal and Elevational Effects
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1002/ece3.10594openalex-snapshot
Elevational patterns of microbial species richness and evenness across climatic zones and taxonomic scales
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Investigating Fine‐Scale Breeding Habitat Use by Amphibians in a Continuous Wetland Using Environmental DNA
inferred← citeshttps://doi.org/10.1002/sae2.70071openalex-snapshot
Diversifying Grapevines With Aromatic Plants Changes the Soil Habitat, Microbial Community Composition and Functions Toward More Efficient Substrate Use and Nutrient Allocation
inferred← citeshttps://doi.org/10.1007/s00248-021-01733-8openalex-snapshot
Herbivory changes soil microbial communities and greenhouse gas fluxes in a high-latitude wetland
inferred← citeshttps://doi.org/10.1007/s11104-025-08130-xopenalex-snapshot
Synergistic regulation of ammonifying bacteria and nitrification inhibitors enhances organic fertilizer mineralization in tea plantation soils: microbial mechanisms and agronomic benefits
inferred← citeshttps://doi.org/10.1016/j.ecolind.2023.110122openalex-snapshot
Positive effects of fungal β diversity on soil multifunctionality mediated by pH in the natural restoration succession stages of alpine meadow patches
inferred← citeshttps://doi.org/10.1016/j.ecolind.2025.114482openalex-snapshot
Soil multifunctionality in arid mining: Driving mechanisms and restoration strategies based on natural succession
inferred← citeshttps://doi.org/10.1016/j.ejsobi.2023.103479openalex-snapshot
Biodiversity in mosaic communities: Soil microbial diversity associates with plant functional groups relating to soil available phosphorus in Tibetan alpine meadow
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2021.149362openalex-snapshot
Meadow degradation increases spatial turnover rates of the fungal community through both niche selection and dispersal limitation
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2023.169488openalex-snapshot
Grazing-driven shifts in soil bacterial community structure and function in a typical steppe are mediated by additional N inputs
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2024.172158openalex-snapshot
Childcare centre soil microbiomes are influenced by substrate type and surrounding vegetation condition
inferred← citeshttps://doi.org/10.1016/j.soilbio.2021.108517openalex-snapshot
Depth effects on bacterial community assembly processes in paddy soils
inferred← citeshttps://doi.org/10.1016/j.soilbio.2022.108635openalex-snapshot
Precipitation balances deterministic and stochastic processes of bacterial community assembly in grassland soils
inferred← citeshttps://doi.org/10.1029/2025gh001459openalex-snapshot
Hotspots of Bacterial Pathogen Abundance and Exposure Risk in Soils of the Contiguous United States
inferred← citeshttps://doi.org/10.1093/aob/mcaf051openalex-snapshot
Inversion of the latitudinal diversity gradient at high taxonomic level in liverworts revealed by a phylogenetically deconstructive approach
inferred← citeshttps://doi.org/10.1101/2021.11.29.470306openalex-snapshot
Consistent predictors of microbial community composition across scales in grasslands reveal low context-dependency
inferred← citeshttps://doi.org/10.1111/1462-2920.16134openalex-snapshot
Hierarchical phylogenetic community assembly of soil protists in a temperate agricultural field
inferred← citeshttps://doi.org/10.1111/ejss.70025openalex-snapshot
The stonesphere in agricultural soils: A microhabitat associated with rock fragments bridging rock and soil
inferred← citeshttps://doi.org/10.1111/jbi.14260openalex-snapshot
Biogeography of root‐associated fungi in foundation grasses of North American plains
inferred← citeshttps://doi.org/10.1111/jvs.70147openalex-snapshot
Altitudinal Variation in Beta Diversity of Woody Plants and Soil Microbes Is Driven Primarily by Local Species Pool
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Best practices in metabarcoding of fungi: From experimental design to results
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Taxonomic and functional biogeographies of soil bacterial communities across the Tibet plateau are better explained by abiotic conditions than distance and plant community composition
inferred← citeshttps://doi.org/10.1111/mec.17178openalex-snapshot
Consistent predictors of microbial community composition across spatial scales in grasslands reveal low context‐dependency
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Coupling temperature‐dependent spatial turnover of microbes and plants using the metabolic theory of ecology
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Divergent Assembly Processes of Phyllosphere and Rhizosphere Microbial Communities Along Environmental Gradient
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Environmental factors influencing the diversity and distribution of dictyostelid cellular slime molds in forest and farmland soils of western China
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Spatial distribution pattern across multiple microbial groups along an environmental stress gradient in tobacco soil
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Niche selection and dispersal limitation inclined spatial turnover rates of soil fungal community in meadow degradation
inferred← citeshttps://doi.org/10.3389/fmicb.2026.1774048openalex-snapshot
Coastal gradients and human disturbance shape bacterial and fungal rhizosphere microbiomes of Heliotropium arboreum in Hainan, China
inferred← citeshttps://doi.org/10.3390/d16120734openalex-snapshot
Soil Microorganisms: Their Role in Enhancing Crop Nutrition and Health
inferred← citeshttps://doi.org/10.3390/f14071475openalex-snapshot
Soil Phosphorus Availability Controls Deterministic and Stochastic Processes of Soil Microbial Community along an Elevational Gradient in Subtropical Forests
inferred← citeshttps://doi.org/10.3390/microorganisms13081934openalex-snapshot
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