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Shifts in bacterial traits under chronic nitrogen deposition align with soil processes in arbuscular, but not ectomycorrhizal‐associated trees

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Microbial functional diversity: From concepts to applications

inferredcites →https://doi.org/10.1002/ecy.1827openalex-snapshot

Experimental evidence that mycorrhizal nitrogen strategies affect soil carbon

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Anthropogenic N deposition, fungal gene expression, and an increasing soil carbon sink in the Northern Hemisphere

inferredcites →https://doi.org/10.1006/niox.2000.0319openalex-snapshot

A Rapid, Simple Spectrophotometric Method for Simultaneous Detection of Nitrate and Nitrite

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Symbiotic Associations

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Mixed Effects Modelling for Nested Data

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Fernow and the Appalachian Hardwood Region

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A rapid chloroform-fumigation extraction method for measuring soil microbial biomass carbon and nitrogen in flooded rice soils

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Nitrogen (N) Dynamics in the Mineral Soil of a Central Appalachian Hardwood Forest During a Quarter Century of Whole-Watershed N Additions

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Towards an assessment of multiple ecosystem processes and services via functional traits

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An extraction method for measuring soil microbial biomass C

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Accessibility of Inorganic and Organic Nutrients for Mycorrhizas

inferredcites →https://doi.org/10.1016/b978-0-12-804312-7.00024-3openalex-snapshot

Mycorrhizal Interactions With Saprotrophs and Impact on Soil Carbon Storage

inferredcites →https://doi.org/10.1016/bs.aecr.2015.02.001openalex-snapshot

Scaling from Traits to Ecosystems

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Carbon–nitrogen interactions on land at global scales: current understanding in modelling climate biosphere feedbacks

inferredcites →https://doi.org/10.1016/j.funeco.2016.05.011openalex-snapshot

Chronic nitrogen additions fundamentally restructure the soil fungal community in a temperate forest

inferredcites →https://doi.org/10.1016/j.oneear.2020.03.006openalex-snapshot

Distinct Assembly Processes and Microbial Communities Constrain Soil Organic Carbon Formation

inferredcites →https://doi.org/10.1016/j.soilbio.2005.08.012openalex-snapshot

Experimental evaluation of methods to quantify dissolved organic nitrogen (DON) and dissolved organic carbon (DOC) in soil

inferredcites →https://doi.org/10.1016/j.soilbio.2010.04.001openalex-snapshot

Determination of gross rates of amino acid production and immobilization in decomposing leaf litter by a novel 15N isotope pool dilution technique

inferredcites →https://doi.org/10.1016/j.soilbio.2015.08.014openalex-snapshot

Differential responses of total and active soil microbial communities to long-term experimental N deposition

inferredcites →https://doi.org/10.1016/j.soilbio.2016.11.006openalex-snapshot

Dinner in the dark: Illuminating drivers of soil organic matter decomposition

inferredcites →https://doi.org/10.1016/j.soilbio.2018.02.003openalex-snapshot

Decreasing soil microbial diversity is associated with decreasing microbial biomass under nitrogen addition

inferredcites →https://doi.org/10.1016/j.soilbio.2018.05.014openalex-snapshot

Nitrogen enrichment shifts functional genes related to nitrogen and carbon acquisition in the fungal community

inferredcites →https://doi.org/10.1016/j.soilbio.2022.108567openalex-snapshot

The path less taken: Long-term N additions slow leaf litter decomposition and favor the physical transfer pathway of soil organic matter formation

inferredcites →https://doi.org/10.1016/j.soilbio.2022.108893openalex-snapshot

Carbon acquisition ecological strategies to connect soil microbial biodiversity and carbon cycling

inferredcites →https://doi.org/10.1038/ismej.2011.159openalex-snapshot

Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients

inferredcites →https://doi.org/10.1038/ismej.2017.43openalex-snapshot

Bacterial carbon use plasticity, phylogenetic diversity and the priming of soil organic matter

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Mycorrhiza-mediated competition between plants and decomposers drives soil carbon storage

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Increased tree carbon storage in response to nitrogen deposition in the US

inferredcites →https://doi.org/10.1038/ngeo844openalex-snapshot

Reduction of forest soil respiration in response to nitrogen deposition

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DADA2: High-resolution sample inference from Illumina amplicon data

inferredcites →https://doi.org/10.1038/nmicrobiol.2016.242openalex-snapshot

Relic DNA is abundant in soil and obscures estimates of soil microbial diversity

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Soil pH mediates the balance between stochastic and deterministic assembly of bacteria

inferredcites →https://doi.org/10.1038/s41396-019-0510-0openalex-snapshot

Defining trait-based microbial strategies with consequences for soil carbon cycling under climate change

inferredcites →https://doi.org/10.1038/s41467-018-05980-1openalex-snapshot

Land use driven change in soil pH affects microbial carbon cycling processes

inferredcites →https://doi.org/10.1038/s41467-019-10390-yopenalex-snapshot

Phylogenetic conservation of bacterial responses to soil nitrogen addition across continents

inferredcites →https://doi.org/10.1038/s41467-021-23676-xopenalex-snapshot

Nutrients cause consolidation of soil carbon flux to small proportion of bacterial community

inferredcites →https://doi.org/10.1038/s41559-017-0132openalex-snapshot

Functional trait diversity maximizes ecosystem multifunctionality

inferredcites →https://doi.org/10.1038/s41559-019-0918-yopenalex-snapshot

Evolutionary history constrains microbial traits across environmental variation

inferredcites →https://doi.org/10.1038/s41587-019-0209-9openalex-snapshot

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

inferredcites →https://doi.org/10.1038/s41598-021-97942-9openalex-snapshot

Interactions between microbial diversity and substrate chemistry determine the fate of carbon in soil

inferredcites →https://doi.org/10.1046/j.1365-2745.1998.00306.xopenalex-snapshot

Benefits of plant diversity to ecosystems: immediate, filter and founder effects

inferredcites →https://doi.org/10.1073/pnas.1508382112openalex-snapshot

Consistent responses of soil microbial communities to elevated nutrient inputs in grasslands across the globe

inferredcites →https://doi.org/10.1073/pnas.1811269115openalex-snapshot

Decomposition responses to climate depend on microbial community composition

inferredcites →https://doi.org/10.1073/pnas.1813723116openalex-snapshot

Climate shapes and shifts functional biodiversity in forests worldwide

inferredcites →https://doi.org/10.1073/pnas.2019355118openalex-snapshot

Functional rarity and evenness are key facets of biodiversity to boost multifunctionality

inferredcites →https://doi.org/10.1080/00103629509369298openalex-snapshot

Microscale determination of inorganic nitrogen in water and soil extracts

inferredcites →https://doi.org/10.1093/nar/gks1219openalex-snapshot

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

inferredcites →https://doi.org/10.1093/oso/9780195120837.001.0001openalex-snapshot

Standard Soil Methods for Long-Term Ecological Research

inferredcites →https://doi.org/10.1093/treephys/27.6.901openalex-snapshot

Ammonium and nitrate uptake, nitrogen productivity and biomass allocation in interior spruce families with contrasting growth rates and mineral nutrient preconditioning

inferredcites →https://doi.org/10.1097/00010694-193109000-00003openalex-snapshot

THE MOISTURE EQUIVALENT AS A MEASURE OF THE FIELD CAPACITY OF SOILS

inferredcites →https://doi.org/10.1098/rstb.2013.0164openalex-snapshot

The global nitrogen cycle in the twenty-first century

inferredcites →https://doi.org/10.1111/1365-2435.12677openalex-snapshot

Mycorrhizal and saprotrophic fungal guilds compete for the same organic substrates but affect decomposition differently

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Water availability drives fine root dynamics in a Eucalyptus woodland under elevated atmospheric CO2 concentration

inferredcites →https://doi.org/10.1111/1365-2745.12467openalex-snapshot

Decay rates of leaf litters from arbuscular mycorrhizal trees are more sensitive to soil effects than litters from ectomycorrhizal trees

inferredcites →https://doi.org/10.1111/1365-2745.13765openalex-snapshot

Both diversity and functional composition affect productivity and water use efficiency in experimental temperate grasslands

inferredcites →https://doi.org/10.1111/1462-2920.13325openalex-snapshot

Partitioning of functional and taxonomic diversity in surface‐associated microbial communities

inferredcites →https://doi.org/10.1111/1462-2920.15843openalex-snapshot

Phylogenetic organization in the assimilation of chemically distinct substrates by soil bacteria

inferredcites →https://doi.org/10.1111/ele.13789openalex-snapshot

Unveiling ecological assembly rules from commonalities in trait distributions

inferredcites →https://doi.org/10.1111/gcb.13980openalex-snapshot

Nitrogen limitation of decomposition and decay: How can it occur?

inferredcites →https://doi.org/10.1111/gcb.14081openalex-snapshot

Interactions among plants, bacteria, and fungi reduce extracellular enzyme activities under long‐term N fertilization

inferredcites →https://doi.org/10.1111/gcb.14368openalex-snapshot

Continental‐scale nitrogen pollution is shifting forest mycorrhizal associations and soil carbon stocks

inferredcites →https://doi.org/10.1111/gcb.15523openalex-snapshot

Differences in microbial community response to nitrogen fertilization result in unique enzyme shifts between arbuscular and ectomycorrhizal‐dominated soils

inferredcites →https://doi.org/10.1111/j.1461-0248.2008.01230.xopenalex-snapshot

Nitrogen additions and microbial biomass: a meta‐analysis of ecosystem studies

inferredcites →https://doi.org/10.1111/j.1574-6968.2011.02209.xopenalex-snapshot

Isolation and identification of soil bacteria growing at the expense of arbuscular mycorrhizal fungi

inferredcites →https://doi.org/10.1111/mec.13224openalex-snapshot

Atmospheric N deposition alters connectance, but not functional potential among saprotrophic bacterial communities

inferredcites →https://doi.org/10.1111/mec.14414openalex-snapshot

Environmental filtering by pH and soil nutrients drives community assembly in fungi at fine spatial scales

inferredcites →https://doi.org/10.1111/nph.12221openalex-snapshot

The mycorrhizal‐associated nutrient economy: a new framework for predicting carbon–nutrient couplings in temperate forests

inferredcites →https://doi.org/10.1111/nph.12440openalex-snapshot

Synthesis and modeling perspectives of rhizosphere priming

inferredcites →https://doi.org/10.1111/nph.14343openalex-snapshot

Dominant mycorrhizal association of trees alters carbon and nutrient cycling by selecting for microbial groups with distinct enzyme function

inferredcites →https://doi.org/10.1111/nph.17256openalex-snapshot

Altered plant carbon partitioning enhanced forest ecosystem carbon storage after 25 years of nitrogen additions

inferredcites →https://doi.org/10.1126/science.aac9323openalex-snapshot

Microbiomes in light of traits: A phylogenetic perspective

inferredcites →https://doi.org/10.1126/science.aaf4507openalex-snapshot

Decoupling function and taxonomy in the global ocean microbiome

inferredcites →https://doi.org/10.1126/science.aat1168openalex-snapshot

Emergent simplicity in microbial community assembly

inferredcites →https://doi.org/10.1128/aem.02280-15openalex-snapshot

Quantitative Microbial Ecology through Stable Isotope Probing

inferredcites →https://doi.org/10.1128/aem.02775-08openalex-snapshot

Contrasting Soil pH Effects on Fungal and Bacterial Growth Suggest Functional Redundancy in Carbon Mineralization

inferredcites →https://doi.org/10.1128/aem.02816-17openalex-snapshot

Anthropogenic N Deposition Alters the Composition of Expressed Class II Fungal Peroxidases

inferredcites →https://doi.org/10.1128/aem.58.1.303-313.1992openalex-snapshot

Denitrification, Dissimilatory Reduction of Nitrate to Ammonium, and Nitrification in a Bioturbated Estuarine Sediment as Measured with 15 N and Microsensor Techniques

inferredcites →https://doi.org/10.1146/annurev-ecolsys-110617-062331openalex-snapshot

Mycorrhizal Fungi as Mediators of Soil Organic Matter Dynamics

inferredcites →https://doi.org/10.1177/0049124104268644openalex-snapshot

Multimodel Inference

inferredcites →https://doi.org/10.1186/s40168-018-0470-zopenalex-snapshot

Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2’s q2-feature-classifier plugin

inferredcites →https://doi.org/10.1890/08-1449.1openalex-snapshot

Functional traits and environmental filtering drive community assembly in a species‐rich tropical system

inferredcites →https://doi.org/10.2134/jeq1994.00472425002300040032xopenalex-snapshot

Herbaceous Layer and Soil Response to Experimental Acidification in a Central Appalachian Hardwood Forest

inferredcites →https://doi.org/10.2136/sssaj2009.0389openalex-snapshot

Alternative Methods for Measuring Inorganic, Organic, and Total Dissolved Nitrogen in Soil

inferredcites →https://doi.org/10.2307/1942661openalex-snapshot

Pseudoreplication and the Design of Ecological Field Experiments

inferredcites →https://doi.org/10.2737/ne-gtr-323openalex-snapshot

Description of the Fork Mountain long-term soil productivity study: site characterization

inferredcites →https://doi.org/10.3389/fmicb.2018.00869openalex-snapshot

Taxon-Function Decoupling as an Adaptive Signature of Lake Microbial Metacommunities Under a Chronic Polymetallic Pollution Gradient

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Integrating Microbial Carbon Acquisition Ecological Strategies with Soil Carbon Modeling

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Impacts of vegetable processing and cheese making effluent on soil microbial functional diversity, community structure, and denitrification potential of land treatment systems

inferred← citeshttps://doi.org/10.1007/s42729-025-02786-1openalex-snapshot

The Response of Forest C: N:P Stoichiometry to Nitrogen Deposition and Underlying Mechanisms: a Review

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Greenhouse cultivation induced soil profile acidification, altered carbon sequestration and bacterial communities in natural barren land: A case study on the Qinghai-Tibet Plateau

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Simulated nitrogen deposition differentially reshapes AM fungal and bacterial co-occurrence networks in the rhizosphere of endangered Calycanthus chinensis seedlings

inferred← citeshttps://doi.org/10.1016/j.catena.2025.109101openalex-snapshot

Nitrogen deposition reshapes biological nitrogen fixation and soil diazotrophic communities across urban and rural forests

inferred← citeshttps://doi.org/10.1016/j.jenvman.2024.123617openalex-snapshot

Arbuscular mycorrhizal type increases the negative feedback of soil microbial biomass to nitrogen deposition

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Nonlinear and scenario-dependent responses of carbon-nitrogen coupling in Chinese dryland soils driven by nitrogen deposition

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Scaling up taxon-specific microbial traits to predict community-level microbial activity in agricultural systems

inferred← citeshttps://doi.org/10.1016/j.soilbio.2024.109640openalex-snapshot

Nitrogen Induced Soil Carbon Gains are Resistant to Loss after the Cessation of Excess Nitrogen Inputs

inferred← citeshttps://doi.org/10.1016/j.soilbio.2025.109967openalex-snapshot

Tree-mycorrhizal types differ in their biomass response to nitrogen addition

inferred← citeshttps://doi.org/10.1016/j.soilbio.2026.110218openalex-snapshot

Long-term nitrogen enrichment reduces microbial carbon use efficiency by restructuring active microbial metabolism

inferred← citeshttps://doi.org/10.1038/s41522-026-00947-3openalex-snapshot

Heterogeneous responses of soil microbial communities and functions in coastal wetlands to long-term nitrogen deposition

inferred← citeshttps://doi.org/10.1111/1365-2745.70346openalex-snapshot

Beech decline reshapes fine root traits, microbial composition and soil carbon–nutrient cycling

inferred← citeshttps://doi.org/10.1111/gcb.70173openalex-snapshot

Mycorrhiza—Saprotroph Interactions and Carbon Cycling in the Rhizosphere

inferred← citeshttps://doi.org/10.1128/aem.01849-24openalex-snapshot

Comparing field and lab quantitative stable isotope probing for nitrogen assimilation in soil microbes

inferred← citeshttps://doi.org/10.1139/cjfr-2025-0077openalex-snapshot

Soil savvy: how stable isotopes are shaping forest ecosystem management

inferred← citeshttps://doi.org/10.1186/s40793-025-00790-7openalex-snapshot

Relative abundances of bacterial phyla are strong indicators of community-scale microbial growth rates in soil

inferred← citeshttps://doi.org/10.2139/ssrn.5218596openalex-snapshot

Recovery of Plant-Microbial Interactions after Long-Term Nitrogen Fertilization Differs by Mycorrhizal Type in Temperate Forests

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Symbiotic soil fungi mitigate nitrogen-driven methane emissions in an experimental grassland

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Investigating Changing Macronutrient Dynamics at a Plant, Microbe and Plant-Microbe Interactions Scale

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