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Diagnosis of biofilm infections: current methods used, challenges and perspectives for the future

https://doi.org/10.1111/jam.15049
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Importance of biofilm formation in surgical infection
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RNA ‐Seq methods for transcriptome analysis
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Drosophila melanogaster Oogenesis: An Overview
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Drosophila as a Model Organism
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Crystal Violet and XTT Assays on Staphylococcus aureus Biofilm Quantification
inferredcites →https://doi.org/10.1007/s12223-016-0458-7openalex-snapshot
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inferredcites →https://doi.org/10.1016/b978-0-08-100382-4.00001-0openalex-snapshot
Overview of biofilm-related problems in medical devices
inferredcites →https://doi.org/10.1016/b978-0-444-64279-0.00002-5openalex-snapshot
Microbial biofilms on medical indwelling devices
inferredcites →https://doi.org/10.1016/j.apjtb.2016.04.006openalex-snapshot
Biofilm formation in clinical isolates of nosocomial Acinetobacter baumannii and its relationship with multidrug resistance
inferredcites →https://doi.org/10.1016/j.cmi.2014.10.024openalex-snapshot
ESCMID∗ guideline for the diagnosis and treatment of biofilm infections 2014
inferredcites →https://doi.org/10.1016/j.cmi.2018.01.003openalex-snapshot
Should standardized susceptibility testing for microbial biofilms be introduced in clinical practice?
inferredcites →https://doi.org/10.1016/j.genrep.2019.100561openalex-snapshot
The correlation between biofilm formation capability and antibiotic resistance pattern in Pseudomonas aeruginosa
inferredcites →https://doi.org/10.1016/j.jcma.2017.07.012openalex-snapshot
Bacterial biofilm and associated infections
inferredcites →https://doi.org/10.1016/j.mib.2012.02.005openalex-snapshot
Global relative and absolute quantitation in microbial proteomics
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Use of MALDI-TOF mass spectrometry to analyze the molecular profile of Pseudomonas aeruginosa biofilms grown on glass and plastic surfaces
inferredcites →https://doi.org/10.1016/j.mimet.2007.11.010openalex-snapshot
Comparison of multiple methods for quantification of microbial biofilms grown in microtiter plates
inferredcites →https://doi.org/10.1016/j.mimet.2015.08.012openalex-snapshot
Quantification of Listeria monocytogenes cells with digital PCR and their biofilm cells with real-time PCR
inferredcites →https://doi.org/10.1016/j.mimet.2016.03.002openalex-snapshot
Confocal microscopy imaging of the biofilm matrix
inferredcites →https://doi.org/10.1016/j.mimet.2017.06.004openalex-snapshot
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inferredcites →https://doi.org/10.1016/j.mimet.2017.08.003openalex-snapshot
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inferredcites →https://doi.org/10.1016/j.mimet.2018.01.003openalex-snapshot
Evaluation of MALDI-TOF mass spectrometry for the identification of bacteria growing as biofilms
inferredcites →https://doi.org/10.1016/j.tibtech.2016.09.001openalex-snapshot
Optimizing Microplate Biofilm Assays to Screen Anti-infective Surfaces
inferredcites →https://doi.org/10.1016/j.tim.2009.01.004openalex-snapshot
Secretion and subcellular localizations of bacterial proteins: a semantic awareness issue
inferredcites →https://doi.org/10.1016/j.tim.2014.12.010openalex-snapshot
Innovative techniques, sensors, and approaches for imaging biofilms at different scales
inferredcites →https://doi.org/10.1016/j.tiv.2011.07.007openalex-snapshot
Limitation of the MTT and XTT assays for measuring cell viability due to superoxide formation induced by nano-scale TiO2
inferredcites →https://doi.org/10.1038/s41522-017-0012-7openalex-snapshot
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inferredcites →https://doi.org/10.1038/srep25889openalex-snapshot
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inferredcites →https://doi.org/10.1039/c2an15931gopenalex-snapshot
Candida “Psilosis” – electromigration techniques and MALDI-TOF mass spectrometry for phenotypical discrimination
inferredcites →https://doi.org/10.1039/c8an01488dopenalex-snapshot
A review of methods for the detection of pathogenic microorganisms
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inferredcites →https://doi.org/10.1080/1040841x.2016.1208146openalex-snapshot
Critical review on biofilm methods
inferredcites →https://doi.org/10.1080/1120009x.2019.1601801openalex-snapshot
In vitro study of antimicrobial activity on Klebsiella Pneumoniae biofilms in endotracheal tubes
inferredcites →https://doi.org/10.1080/14787210.2018.1417036openalex-snapshot
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inferredcites →https://doi.org/10.1089/mdr.2018.0027openalex-snapshot
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inferredcites →https://doi.org/10.1093/femsyr/foy025openalex-snapshot
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inferredcites →https://doi.org/10.1093/mmy/myx111openalex-snapshot
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An Improved Crystal Violet Assay for Biofilm Quantification in 96-Well Microtitre Plate
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Biofilm Formation of Staphylococcus aureus on Various Surfaces and Their Resistance to Chlorine Sanitizer
inferredcites →https://doi.org/10.1111/coa.13141openalex-snapshot
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inferredcites →https://doi.org/10.1111/j.1600-0463.2007.apm_630.xopenalex-snapshot
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inferredcites →https://doi.org/10.1111/jam.13368openalex-snapshot
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inferredcites →https://doi.org/10.1128/9781555817466.ch11openalex-snapshot
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inferredcites →https://doi.org/10.1128/msphere.00334-18openalex-snapshot
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inferredcites →https://doi.org/10.1177/0022034517701902openalex-snapshot
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inferredcites →https://doi.org/10.1186/s13568-015-0134-3openalex-snapshot
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inferredcites →https://doi.org/10.14348/molcells.2017.0017openalex-snapshot
Survival assays using Caenorhabditis elegans
inferredcites →https://doi.org/10.1556/030.66.2019.026openalex-snapshot
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inferredcites →https://doi.org/10.1590/0037-8682-0214-2019openalex-snapshot
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inferredcites →https://doi.org/10.1590/s1517-83822013005000031openalex-snapshot
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inferredcites →https://doi.org/10.2147/ijgm.s153268openalex-snapshot
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inferredcites →https://doi.org/10.2174/1874285801711010053openalex-snapshot
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inferredcites →https://doi.org/10.2217/fmb-2018-0293openalex-snapshot
Pseudomonas Species Isolated From Camel Meat: Quorum Sensing-Dependent Virulence, Biofilm Formation and Antibiotic Resistance
inferredcites →https://doi.org/10.3109/1040841x.2016.1169990openalex-snapshot
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inferredcites →https://doi.org/10.3389/fmicb.2015.00791openalex-snapshot
MALDI-TOF mass spectrometry: an emerging technology for microbial identification and diagnosis
inferredcites →https://doi.org/10.3390/cells8101129openalex-snapshot
The Core Proteome of Biofilm-Grown Clinical Pseudomonas aeruginosa Isolates
inferredcites →https://doi.org/10.3390/ijerph15081695openalex-snapshot
Use of MALDI-TOF MS to Discriminate between Biofilm-Producer and Non-Producer Strains of Staphylococcus epidermidis
inferredcites →https://doi.org/10.3390/ijms17060870openalex-snapshot
Metabolomic Studies of Oral Biofilm, Oral Cancer, and Beyond
inferredcites →https://doi.org/10.3390/jof3020022openalex-snapshot
Fungal Biofilms and Polymicrobial Diseases
inferredcites →https://doi.org/10.3390/ma11091705openalex-snapshot
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inferredcites →https://doi.org/10.3390/pathogens8010014openalex-snapshot
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inferredcites →https://doi.org/10.3889/oamjms.2018.246openalex-snapshot
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inferredcites →https://doi.org/10.4155/fmc.12.59openalex-snapshot
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inferredcites →https://doi.org/10.5167/uzh-180697openalex-snapshot
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inferredcites →https://doi.org/10.5281/zenodo.13533520openalex-snapshot
RNA-Seq methods for transcriptome analysis
inferredcites →https://doi.org/10.7717/peerj.780openalex-snapshot
Diagnosis of bacterial vaginosis by a new multiplex peptide nucleic acid fluorescence in situ hybridization method

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Biofilms and Benign Colonic Diseases
inferred← citeshttps://doi.org/10.3390/jcm13010171openalex-snapshot
The Respiratory Microbiome in Paediatric Chronic Wet Cough: What Is Known and Future Directions
inferred← citeshttps://doi.org/10.3390/jcm15103630openalex-snapshot
Association Between Neutrophil-to-Lymphocyte Ratio and Early Detection of Ventilator-Associated Pneumonia in Mechanically Ventilated ICU Patients
inferred← citeshttps://doi.org/10.3390/microorganisms11092214openalex-snapshot
Understanding and Implementing Diagnostic Stewardship: A Guide for Resident Physicians in the Era of Antimicrobial Resistance
inferred← citeshttps://doi.org/10.3390/microorganisms12081522openalex-snapshot
Biofilm Production and Its Implications in Pediatrics
inferred← citeshttps://doi.org/10.3390/microorganisms12091820openalex-snapshot
Profile of Bacterial Communities in Copper Mine Tailings Revealed through High-Throughput Sequencing
inferred← citeshttps://doi.org/10.3390/microorganisms12101966openalex-snapshot
Optimizing Diagnosis and Management of Ventilator-Associated Pneumonia: A Systematic Evaluation of Biofilm Detection Methods and Bacterial Colonization on Endotracheal Tubes
inferred← citeshttps://doi.org/10.3390/microorganisms13122726openalex-snapshot
Proactive Strategies to Prevent Biofilm-Associated Infections: From Mechanistic Insights to Clinical Translation
inferred← citeshttps://doi.org/10.3390/pr12020280openalex-snapshot
Biofilm Formation in Water Distribution Systems
inferred← citeshttps://doi.org/10.5194/jbji-11-555-2026openalex-snapshot
Sonication versus peri-implant tissue culture in fracture-related infection: diagnostic performance and therapeutic consequences in a single-center cohort
inferred← citeshttps://doi.org/10.7748/ns.2024.e12360openalex-snapshot
Wound infection: diagnosis, treatment and prevention
inferred← citeshttps://doi.org/10.7759/cureus.45510openalex-snapshot
Biofilm's Impact on Inflammatory Bowel Diseases
inferred← citeshttps://doi.org/10.7759/cureus.67173openalex-snapshot
Implant Mechanics, Biological Milieu, and Peri-Implantitis: A Narrative Review
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