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An increasing opine carbon bias in artificial exudation systems and genetically modified plant rhizospheres leads to an increasing reshaping of bacterial populations
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1007/978-94-011-5060-6_9openalex-snapshot
Opines and Opine-Like Molecules Involved in Plant-Rhizobiaceae Interactions
inferredcites →https://doi.org/10.1007/bf01977351openalex-snapshot
NewAgrobacterium helper plasmids for gene transfer to plants
inferredcites →https://doi.org/10.1007/s00248-011-9930-8openalex-snapshot
Soil and Cultivar Type Shape the Bacterial Community in the Potato Rhizosphere
inferredcites →https://doi.org/10.1007/s00248-012-0082-2openalex-snapshot
Distinctive Bacterial Communities in the Rhizoplane of Four Tropical Tree Species
inferredcites →https://doi.org/10.1007/s002489900137openalex-snapshot
Comparison of Parental and Transgenic Alfalfa Rhizosphere Bacterial Communities Using Biolog GN Metabolic Fingerprinting and Enterobacterial Repetitive Intergenic Consensus Sequence-PCR (ERIC-PCR)
inferredcites →https://doi.org/10.1007/s004250000384openalex-snapshot
Utilization of mutants to analyze the interaction between Arabidopsis thaliana and its naturally root-associated Pseudomonas
inferredcites →https://doi.org/10.1007/s10705-009-9314-3openalex-snapshot
Does grassland vegetation drive soil microbial diversity?
inferredcites →https://doi.org/10.1007/s11104-008-9814-yopenalex-snapshot
Plant-driven selection of microbes
inferredcites →https://doi.org/10.1007/s11104-008-9885-9openalex-snapshot
Rhizosphere: biophysics, biogeochemistry and ecological relevance
inferredcites →https://doi.org/10.1016/0008-6215(94)84060-1openalex-snapshot
N-containing sugars fromMorus alba and their glycosidase inhibitory activities
inferredcites →https://doi.org/10.1016/0008-6215(96)00204-2openalex-snapshot
Calystegine B4, a novel trehalase inhibitor from Scopolia japonica
inferredcites →https://doi.org/10.1016/b978-0-12-394380-4.50021-9openalex-snapshot
Occurrence and Biosynthesis of Opines
inferredcites →https://doi.org/10.1016/j.femsec.2004.07.008openalex-snapshot
Bacterial populations in the rhizosphere of tobacco plants producing the quorum-sensing signals hexanoyl-homoserine lactone and 3-oxo-hexanoyl-homoserine lactone
inferredcites →https://doi.org/10.1016/s0168-6496(99)00032-xopenalex-snapshot
Influence of transgenic T4-lysozyme-producing potato plants on potentially beneficial plant-associated bacteria
inferredcites →https://doi.org/10.1016/s1470-160x(01)00003-6openalex-snapshot
Challenges in the development and use of ecological indicators
inferredcites →https://doi.org/10.1023/a:1004380832118openalex-snapshot
Root excretion of carboxylic acids and protons in phosphorus-deficient plants
inferredcites →https://doi.org/10.1038/ismej.2008.80openalex-snapshot
Plant host habitat and root exudates shape soil bacterial community structure
inferredcites →https://doi.org/10.1038/ismej.2010.35openalex-snapshot
Bacterial diversity in rhizosphere soil from Antarctic vascular plants of Admiralty Bay, maritime Antarctica
inferredcites →https://doi.org/10.1038/ismej.2013.196openalex-snapshot
Rhizosphere microbiome assemblage is affected by plant development
inferredcites →https://doi.org/10.1038/nature11237openalex-snapshot
Defining the core Arabidopsis thaliana root microbiome
inferredcites →https://doi.org/10.1038/nbt0497-363openalex-snapshot
Modification of rhizobacterial populations by engineering bacterium utilization of a novel plant-produced resource
inferredcites →https://doi.org/10.1038/nbt0497-369openalex-snapshot
Genetically engineered plants producing opines alter their biological environment
inferredcites →https://doi.org/10.1038/nrmicro3109openalex-snapshot
Going back to the roots: the microbial ecology of the rhizosphere
inferredcites →https://doi.org/10.1046/j.1365-2664.1999.00448.xopenalex-snapshot
A field study with genetically engineered alfalfa inoculated with recombinantSinorhizobium meliloti: effects on the soil ecosystem
inferredcites →https://doi.org/10.1046/j.1365-294x.2000.00940.xopenalex-snapshot
Effect of crop rotation and soil cover on alteration of the soil microflora generated by the culture of transgenic plants producing opines
inferredcites →https://doi.org/10.1046/j.1523-1739.1995.09040962.xopenalex-snapshot
A Conversation on Refining the Concept of Keystone Species
inferredcites →https://doi.org/10.1071/bi9610349openalex-snapshot
The Growth Of Rhizobium in Synthetic Media
inferredcites →https://doi.org/10.1073/pnas.0507535103openalex-snapshot
The diversity and biogeography of soil bacterial communities
inferredcites →https://doi.org/10.1074/jbc.m110.119040openalex-snapshot
Root Secretion of Defense-related Proteins Is Development-dependent and Correlated with Flowering Time
inferredcites →https://doi.org/10.1078/0944-5013-00086openalex-snapshot
Phenotypic and genotypic characterization of antagonistic bacteria associated with roots of transgenic and non-transgenic potato plants
inferredcites →https://doi.org/10.1093/bioinformatics/btl117openalex-snapshot
Pvclust: an R package for assessing the uncertainty in hierarchical clustering
inferredcites →https://doi.org/10.1093/bioinformatics/btr381openalex-snapshot
UCHIME improves sensitivity and speed of chimera detection
inferredcites →https://doi.org/10.1093/bioinformatics/btt509openalex-snapshot
Infernal 1.1: 100-fold faster RNA homology searches
inferredcites →https://doi.org/10.1093/nar/17.19.7843openalex-snapshot
Isolation and direct complete nucleotide determination of entire genes. Characterization of a gene coding for 16S ribosomal RNA
inferredcites →https://doi.org/10.1093/nar/gkn879openalex-snapshot
The Ribosomal Database Project: improved alignments and new tools for rRNA analysis
inferredcites →https://doi.org/10.1094/mpmi-19-0250openalex-snapshot
Organic Acids, Sugars, and l -Tryptophane in Exudates of Vegetables Growing on Stonewool and Their Effects on Activities of Rhizosphere Bacteria
inferredcites →https://doi.org/10.1104/pp.109.147462openalex-snapshot
An ABC Transporter Mutation Alters Root Exudation of Phytochemicals That Provoke an Overhaul of Natural Soil Microbiota
inferredcites →https://doi.org/10.1104/pp.70.5.1283openalex-snapshot
Isoxazolin-5-ones and Amino Acids in Root Exudates of Pea and Sweet Pea Seedlings
inferredcites →https://doi.org/10.1104/pp.98.2.784openalex-snapshot
Mannityl Opine Accumulation and Exudation by Transgenic Tobacco
inferredcites →https://doi.org/10.1111/j.1461-0248.2012.01759.xopenalex-snapshot
Increasing antagonistic interactions cause bacterial communities to collapse at high diversity
inferredcites →https://doi.org/10.1111/j.1462-2920.2005.00886.xopenalex-snapshot
Diversity of N‐acyl homoserine lactone‐producing and ‐degrading bacteria in soil and tobacco rhizosphere
inferredcites →https://doi.org/10.1111/j.1462-2920.2009.01977.xopenalex-snapshot
Evidence for structuring of bacterial community composition by organic carbon source in temperate lakes
inferredcites →https://doi.org/10.1111/j.1469-8137.2006.01650.xopenalex-snapshot
Dynamic of the genetic structure of bacterial and fungal communities at different developmental stages of Medicago truncatula Gaertn. cv. Jemalong line J5
inferredcites →https://doi.org/10.1111/j.1574-6941.2009.00654.xopenalex-snapshot
Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere
inferredcites →https://doi.org/10.1111/j.1574-6976.2011.00269.xopenalex-snapshot
Pseudomonas genomes: diverse and adaptable
inferredcites →https://doi.org/10.1128/aem.01541-09openalex-snapshot
Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
inferredcites →https://doi.org/10.1128/aem.06102-11openalex-snapshot
Effect of Genetically Modified Poplars on Soil Microbial Communities during the Phytoremediation of Waste Mine Tailings
inferredcites →https://doi.org/10.1128/aem.06159-11openalex-snapshot
Efficient Biostimulation of Native and Introduced Quorum-Quenching Rhodococcus erythropolis Populations Is Revealed by a Combination of Analytical Chemistry, Microbiology, and Pyrosequencing
inferredcites →https://doi.org/10.1128/aem.60.12.4268-4272.1994openalex-snapshot
Mimosine, a Toxin Present in Leguminous Trees ( Leucaena spp.), Induces a Mimosine-Degrading Enzyme Activity in Some Rhizobium Strains
inferredcites →https://doi.org/10.1128/aem.68.5.2562-2566.2002openalex-snapshot
Engineered Rhizosphere: the Trophic Bias Generated by Opine-Producing Plants Is Independent of the Opine Type, the Soil Origin, and the Plant Species
inferredcites →https://doi.org/10.1128/aem.68.7.3358-3365.2002openalex-snapshot
Seasonal Fluctuations and Long-Term Persistence of Pathogenic Populations of Agrobacterium spp. in Soils
inferredcites →https://doi.org/10.1128/jb.170.3.1153-1161.1988openalex-snapshot
A plasmid of Rhizobium meliloti 41 encodes catabolism of two compounds from root exudate of Calystegium sepium
inferredcites →https://doi.org/10.1146/annurev-genet-110410-132549openalex-snapshot
The Rules of Engagement in the Legume-Rhizobial Symbiosis
inferredcites →https://doi.org/10.1146/annurev.arplant.57.032905.105159openalex-snapshot
THE ROLE OF ROOT EXUDATES IN RHIZOSPHERE INTERACTIONS WITH PLANTS AND OTHER ORGANISMS
inferredcites →https://doi.org/10.1186/1471-2105-12-473openalex-snapshot
Estimation of bacterial diversity using next generation sequencing of 16S rDNA: a comparison of different workflows
inferredcites →https://doi.org/10.1186/1746-4811-2-16openalex-snapshot
An improved method for preparing Agrobacterium cells that simplifies the Arabidopsis transformation protocol
inferredcites →https://doi.org/10.1186/gb-2010-11-10-r106openalex-snapshot
Differential expression analysis for sequence count data
inferredcites →https://doi.org/10.1201/9781420005585.ch1openalex-snapshot
Types, Amounts, and Possible Functions of Compounds Released into the Rhizosphere by Soil-Grown Plants
inferredcites →https://doi.org/10.1890/05-1839openalex-snapshot
TOWARD AN ECOLOGICAL CLASSIFICATION OF SOIL BACTERIA
inferredcites →https://doi.org/10.1890/10-0332.1openalex-snapshot
Metacommunity organization of soil microorganisms depends on habitat defined by presence of Lobelia siphilitica plants
inferredcites →https://doi.org/10.2307/1942268openalex-snapshot
An Ordination of the Upland Forest Communities of Southern Wisconsin
inferredcites →https://doi.org/10.2527/1995.7351487xopenalex-snapshot
Leucaena toxicosis and its control in ruminants
inferredcites →https://doi.org/10.32614/r.manualsopenalex-snapshot
R: A Language and Environment for Statistical Computing
inferredcites →https://doi.org/10.4303/mg/235551openalex-snapshot
Evaluation of the RDP Classifier Accuracy Using 16S rRNA Gene Variable Regions
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1016/j.phytochem.2021.112813zenodo-depositor-declared
Opine biosynthesis in naturally transgenic plants: Genes and products
inferred← citeshttps://doi.org/10.1002/9781119505457.ch13openalex-snapshot
Biotechnology of Plant‐Associated Microbiomes
inferred← citeshttps://doi.org/10.1007/82_2018_83openalex-snapshot
Niche Construction and Exploitation by Agrobacterium: How to Survive and Face Competition in Soil and Plant Habitats
inferred← citeshttps://doi.org/10.1007/978-3-319-64982-5_12openalex-snapshot
Biotechnological Perspectives of Legume–Rhizobium Symbiosis
inferred← citeshttps://doi.org/10.1007/978-981-15-6125-2_9openalex-snapshot
Newly Introduced or Modified Genes in Plants Potentially Modulate the Host Microbiome
inferred← citeshttps://doi.org/10.1007/978-981-16-0889-6_13openalex-snapshot
Rhizoengineering: A Strategy to Enhance Soil and Crop Productivity
inferred← citeshttps://doi.org/10.1007/978-981-19-4101-6_14openalex-snapshot
Rhizosphere Engineering for Systemic Resistance/Tolerance to Biotic and Abiotic Stress
inferred← citeshttps://doi.org/10.1007/978-981-19-4906-7_4openalex-snapshot
Biotechnological Solutions to Improve Nitrogenous Nutrition in Nonlegume Crops
inferred← citeshttps://doi.org/10.1007/s00572-016-0730-3openalex-snapshot
Pseudomonas fluorescens C7R12 type III secretion system impacts mycorrhization of Medicago truncatula and associated microbial communities
inferred← citeshttps://doi.org/10.1016/bs.abr.2016.10.007openalex-snapshot
Plant Communication With Associated Microbiota in the Spermosphere, Rhizosphere and Phyllosphere
inferred← citeshttps://doi.org/10.1016/j.apsoil.2015.02.009openalex-snapshot
Relative importance of soil physico-chemical characteristics and plant species identity to the determination of soil microbial community structure
inferred← citeshttps://doi.org/10.1016/j.copbio.2015.01.004openalex-snapshot
Use of plant colonizing bacteria as chassis for transfer of N2-fixation to cereals
inferred← citeshttps://doi.org/10.1016/j.copbio.2021.06.009openalex-snapshot
Engineering the plant microbiota in the context of the theory of ecological communities
inferred← citeshttps://doi.org/10.1016/j.tplants.2016.01.002openalex-snapshot
Engineering the Rhizosphere
inferred← citeshttps://doi.org/10.1016/j.tplants.2019.06.008openalex-snapshot
Plant Symbionts Are Engineers of the Plant-Associated Microbiome
inferred← citeshttps://doi.org/10.1021/acs.chemrev.4c00687openalex-snapshot
Synthetic Biology of Plants and Microbes for Agriculture, Environment, and Future Applications
inferred← citeshttps://doi.org/10.1021/acs.jafc.1c05257openalex-snapshot
Identification and Quantitation of Taste-Active Compounds in Dried Scallops by Combined Application of the Sensomics and a Quantitative NMR Approach
inferred← citeshttps://doi.org/10.1038/ismej.2016.137openalex-snapshot
Fitness costs restrict niche expansion by generalist niche-constructing pathogens
inferred← citeshttps://doi.org/10.1038/s41467-019-10882-xopenalex-snapshot
Engineering transkingdom signalling in plants to control gene expression in rhizosphere bacteria
inferred← citeshttps://doi.org/10.1038/s41467-024-45897-6openalex-snapshot
Synthetic microbe-to-plant communication channels
inferred← citeshttps://doi.org/10.1038/s41564-019-0631-2openalex-snapshot
Control of nitrogen fixation in bacteria that associate with cereals
inferred← citeshttps://doi.org/10.1073/pnas.2117465119openalex-snapshot
Engineered plant control of associative nitrogen fixation
inferred← citeshttps://doi.org/10.1111/1462-2920.16288openalex-snapshot
Rhizopine biosensors for plant‐dependent control of bacterial gene expression
inferred← citeshttps://doi.org/10.1111/nph.15164openalex-snapshot
Lifestyle of the biotroph Agrobacterium tumefaciens in the ecological niche constructed on its host plant
inferred← citeshttps://doi.org/10.1128/aem.00582-21openalex-snapshot
Engineering Posttranslational Regulation of Glutamine Synthetase for Controllable Ammonia Production in the Plant Symbiont Azospirillum brasilense
inferred← citeshttps://doi.org/10.1128/aem.01055-16openalex-snapshot
Symbiotic Nitrogen Fixation and the Challenges to Its Extension to Nonlegumes
inferred← citeshttps://doi.org/10.1146/annurev-genet-120215-034952openalex-snapshot
The Plant Microbiota: Systems-Level Insights and Perspectives
inferred← citeshttps://doi.org/10.1186/s13568-017-0437-7openalex-snapshot
Phenotypic and genomic survey on organic acid utilization profile of Pseudomonas mendocina strain S5.2, a vineyard soil isolate
inferred← citeshttps://doi.org/10.3389/fmicb.2016.00341openalex-snapshot
Towards an Enhanced Understanding of Plant–Microbiome Interactions to Improve Phytoremediation: Engineering the Metaorganism
inferred← citeshttps://doi.org/10.3389/fpls.2017.01600openalex-snapshot
Natural Agrobacterium Transformants: Recent Results and Some Theoretical Considerations
inferred← citeshttps://doi.org/10.3390/biology13080601openalex-snapshot
Evolutionary Fate of the Opine Synthesis Genes in the Arachis L. Genomes
inferred← citeshttps://doi.org/10.3390/plants9010097openalex-snapshot
Current Progress in Nitrogen Fixing Plants and Microbiome Research
inferred← citeshttps://doi.org/10.3390/plants9020276openalex-snapshot
Molecular Basis of Root Nodule Symbiosis between Bradyrhizobium and ‘Crack-Entry’ Legume Groundnut (Arachis hypogaea L.)
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Genetic Circuit Design in Rhizobacteria
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Effectiveness and Fate Nitrogen in Plants Physiology, Molecular Approaches for Maximization and Improving Nitrogen Use Efficiency. A Review
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Application of plant specialized metabolites to modulate soil microbiota
inferred← citeshttps://doi.org/10.70675/56c8c5d6z9580z495az90cczc35409ef3e6eopenalex-snapshot
Anaerobic respiration diversification in Agrobacterium fabrum C58
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Sequencing and functional analysis of cT-DNAs in Nicotiana
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