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Inferring the demographic history of Drosophila subobscura from nucleotide variation at regions not affected by chromosomal inversions

https://doi.org/10.1111/mec.13155
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Fine-scale mapping of recombination rate in Drosophila refines its correlation to diversity and divergence
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Wet phases in the Sahara/Sahel region and human migration patterns in North Africa
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Colonization of America by Drosophila subobscura : Experiment in natural populations that supports the adaptive role of chromosomal-inversion polymorphism
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Gene conversion is involved in the transfer of genetic information between naturally occurring inversions of Drosophila.
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Vanishing Chromosomal Inversion Clines inDrosophila subobscurafrom Chile: Is Behavioral Thermoregulation to Blame?
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DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
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Effects of Inversions on Within- and Between-Species Recombination and Divergence
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EVOLUTIONARY RELATIONSHIP OF DNA SEQUENCES IN FINITE POPULATIONS
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A Test of Neutral Molecular Evolution Based on Nucleotide Data
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Statistical method for testing the neutral mutation hypothesis by DNA polymorphism.
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Evidence of extensive genetic exchange in the rp49 region among polymorphic chromosome inversions in Drosophila subobscura.
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Estimation of levels of gene flow from DNA sequence data.
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Inferring Coalescence Times From DNA Sequence Data
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Recombination and Gene Flux Caused by Gene Conversion and Crossing Over in Inversion Heterokaryotypes
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Inference of Population History Using a Likelihood Approach
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Molecular Population Genetics of the rp49 Gene Region in Different Chromosomal Inversions of Drosophila subobscura
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Effect of Inversion Polymorphism on the Neutral Nucleotide Variability of Linked Chromosomal Regions in Drosophila
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Hitchhiking Under Positive Darwinian Selection
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DNA Variation at therp49Gene Region ofDrosophila simulans: Evolutionary Inferences From an Unusual Haplotype Structure
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Approximate Bayesian Computation in Population Genetics
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Demography and Natural Selection Have Shaped Genetic Variation in Drosophila melanogaster: A Multi-locus Approach
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Effect of Misoriented Sites on Neutrality Tests With Outgroup
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Excess of Nonsynonymous Polymorphism at Acph-1 in Different Gene Arrangements of Drosophila subobscura
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Context Dependence, Ancestral Misidentification, and Spurious Signatures of Natural Selection
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Genetic Exchange versus Genetic Differentiation in a Medium-Sized Inversion of Drosophila: The A2/Ast Arrangements of Drosophila subobscura
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Uncovering the Footprint of Positive Selection on the X Chromosome of Drosophila melanogaster
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Approximate Bayesian Analysis of Drosophila melanogaster Polymorphism Data Reveals a Recent Colonization of Southeast Asia
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MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
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Estimating Divergence Dates and Substitution Rates in the Drosophila Phylogeny
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MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
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Characterization of the Breakpoints of a Polymorphic Inversion Complex Detects Strict and Broad Breakpoint Reuse at the Molecular Level
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Genetics of Drosophila subobscura populations
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Population growth of human Y chromosomes: a study of Y chromosome microsatellites
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Nucleotide Variation at the yellow Gene Region is not Reduced in Drosophila subobscura: A Study in Relation to Chromosomal Polymorphism
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Selection of Conserved Blocks from Multiple Alignments for Their Use in Phylogenetic Analysis
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Using Restriction-Map Analysis to Characterize the Colonization Process of Drosophila subobscura on the American Continent I. Rp49 Region
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Genetic consequences of climatic oscillations in the Quaternary
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Multilocus patterns of nucleotide variability and the demographic and selection history of Drosophila melanogaster populations
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INTROGRESSION IN THEDROSOPHILA SUBOBSCURA—D. MADEIRENSISSISTER SPECIES: EVIDENCE OF GENE FLOW IN NUCLEAR GENES DESPITE MITOCHONDRIAL DIFFERENTIATION
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Molecular evidence for glacial refugia of mountain plants in the European Alps
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Refugia, differentiation and postglacial migration in arctic‐alpine Eurasia, exemplified by the mountain avens ( Dryas octopetala L.)
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Introduction history of Drosophila subobscura in the New World: a microsatellite‐based survey using ABC methods
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Distinguishing between population bottleneck and population subdivision by a Bayesian model choice procedure
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PHYLOGENETIC CONSTRAINTS IN KEY FUNCTIONAL TRAITS BEHIND SPECIES’ CLIMATE NICHES: PATTERNS OF DESICCATION AND COLD RESISTANCE ACROSS 95DROSOPHILASPECIES
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STRUCTURE AND POPULATION GENETICS OF THE BREAKPOINTS OF A POLYMORPHIC INVERSION INDROSOPHILA SUBOBSCURA
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Relevant Statistics for Bayesian Model Choice
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The Duration of Forest Stages in Southern Europe and Interglacial Climate Variability
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Global Genetic Change Tracks Global Climate Warming in Drosophila subobscura
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THE INTERCHROMOSOMAL CONTROL OF RECOMBINATION
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Mlcoalsim: Multilocus Coalescent Simulations
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ABCtoolbox: a versatile toolkit for approximate Bayesian computations
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BEAST: Bayesian evolutionary analysis by sampling trees
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Validation of Software for Bayesian Models Using Posterior Quantiles
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Inferring the Demographic History and Rate of Adaptive Substitution in Drosophila
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The Genomics of Speciation in Drosophila: Diversity, Divergence, and Introgression Estimated Using Low-Coverage Genome Sequencing
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The Genetic Content of Chromosomal Inversions across a Wide Latitudinal Gradient
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Detecting the Footprint of Positive Selection in a European Population of Drosophila melanogasterSequence data from this article have been deposited with the EMBL/GenBank Data Libraries under accession nos. AJ781836, AJ783306.
inferredcites →https://doi.org/10.1534/genetics.104.032748openalex-snapshot
Chromosomal Inversion Polymorphism Leads to Extensive Genetic Structure
inferredcites →https://doi.org/10.1534/genetics.105.041947openalex-snapshot
Mechanisms of Genetic Exchange Within the Chromosomal Inversions of Drosophila pseudoobscura
inferredcites →https://doi.org/10.1534/genetics.106.061432openalex-snapshot
Statistical Tests for Detecting Positive Selection by Utilizing High-Frequency Variants
inferredcites →https://doi.org/10.1534/genetics.106.064758openalex-snapshot
Evaluation of the Genomic Extent of Effects of Fixed Inversion Differences on Intraspecific Variation and Interspecific Gene Flow in Drosophila pseudoobscura and D. persimilis
inferredcites →https://doi.org/10.1534/genetics.107.074922openalex-snapshot
Distinctly Different Sex Ratios in African and European Populations ofDrosophila melanogasterInferred From Chromosomewide Single Nucleotide Polymorphism Data
inferredcites →https://doi.org/10.1534/genetics.109.102509openalex-snapshot
Efficient Approximate Bayesian Computation Coupled With Markov Chain Monte Carlo Without Likelihood
inferredcites →https://doi.org/10.1534/genetics.109.109058openalex-snapshot
Bayesian Computation and Model Selection Without Likelihoods
inferredcites →https://doi.org/10.1534/genetics.112.142547openalex-snapshot
Selective Sweeps in Multilocus Models of Quantitative Traits
inferredcites →https://doi.org/10.1534/genetics.112.145912openalex-snapshot
Demographic Inference Reveals African and European Admixture in the North AmericanDrosophila melanogasterPopulation
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Partial thermoregulatory compensation by a rapidly evolving invasive species along a latitudinal cline
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Approximately Sufficient Statistics and Bayesian Computation
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MacClade 4.0: analysis of phylogeny and character evolution

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Population Genetics: An Introduction
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Inversions and adaptation to the plant toxin ouabain shape DNA sequence variation within and between chromosomal inversions of Drosophila subobscura.
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Evidence of neofunctionalization after the duplication of the highly conserved Polycomb group gene Caf1-55 in the obscura group of Drosophila
inferred← citeshttps://doi.org/10.1111/jeb.13018openalex-snapshot
Local adaptation of reproductive performance during thermal stress
inferred← citeshttps://doi.org/10.1186/s12864-019-5590-8openalex-snapshot
Long-read based assembly and synteny analysis of a reference Drosophila subobscura genome reveals signatures of structural evolution driven by inversions recombination-suppression effects
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Molecular population genetics of the Polycomb genes in Drosophila subobscura
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