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Transcriptional variation associated with cactus host plant adaptation in Drosophila mettleri populations

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Heterochromatin Positioning and Nuclear Architecture

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Transcriptome Responses in Herbivorous Insects Towards Host Plant and Toxin Feeding

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Cactus stems (Opuntia spp.): A review on their chemistry, technology, and uses

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Ecology and Genetics of Sonoran Desert Drosophila

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Ecological and Evolutionary Importance of Host Plant Chemistry

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The Nutritional Importance of Pure and Mixed Cultures of Yeasts in the Development of Drosophila mulleri Larvae in Opuntia Tissues and its Relationship to Host Plant Shifts

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Significance of saguaro cactus alkaloids in ecology ofDrosophila mettleri, a soil-breeding, cactophilic drosophilid

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Induction by alkaloids and phenobarbital of Family 4 Cytochrome P450s in Drosophila : evidence for involvement in host plant utilization

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Infestation of a novel host plant by Tephritis conura (Diptera: Tephritidae) in northern Britain: host-range expansion or host shift?

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β-Phenethylamines from the cactus genus Opuntia

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The involvement of several enzymes in methanol detoxification in Drosophila melanogaster adults

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Stage-specific expression of the chitin synthase DmeChSA and DmeChSB genes during the onset of Drosophila metamorphosis

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Structure and functions of arthropod proteasomes

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Canalization of Development and Genetic Assimilation of Acquired Characters

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Evolution of genes and genomes on the Drosophila phylogeny

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De novo transcript sequence reconstruction from RNA-Seq: reference generation and analysis with Trinity

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Insect chitin synthase

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Characterization of Drosophila melanogaster cytochrome P450 genes

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Involvement of cytochrome P450 in host-plant utilization by Sonoran Desert Drosophila.

inferredcites →https://doi.org/10.1073/pnas.94.20.10797openalex-snapshot

Molecular cloning of a family of xenobiotic-inducible drosophilid cytochrome P450s: Evidence for involvement in host-plant allelochemical resistance

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Chemical composition of volatiles fromOpuntia littoralisOpuntia ficus-indica, andOpuntia proliferagrowing on Catalina Island, California

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Ecological Speciation

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ClueGO: a Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks

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edgeR : a Bioconductor package for differential expression analysis of digital gene expression data

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Chemical Interactions in the Cactus-Microorganism-DrosophilaModel System of the Sonoran Desert

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FLIES ACROSS THE WATER: GENETIC DIFFERENTIATION AND REPRODUCTIVE ISOLATION IN ALLOPATRIC DESERT DROSOPHILA

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Genetic differentiation of island populations: geographical barrier or a host switch?

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Adaptive versus non‐adaptive phenotypic plasticity and the potential for contemporary adaptation in new environments

inferredcites →https://doi.org/10.1111/j.1365-294x.2004.02169.xopenalex-snapshot

Contrasting population genetic patterns and evolutionary histories among sympatric Sonoran Desert cactophilic Drosophila

inferredcites →https://doi.org/10.1111/j.1365-294x.2005.02532.xopenalex-snapshot

Activity variation in alcohol dehydrogenase paralogs is associated with adaptation to cactus host use in cactophilicDrosophila

inferredcites →https://doi.org/10.1111/j.1365-294x.2006.03102.xopenalex-snapshot

Functional genomics of cactus host shifts in Drosophila mojavensis

inferredcites →https://doi.org/10.1111/j.1365-294x.2008.03823.xopenalex-snapshot

Molecular evolution and population genetics of two Drosophila mettleri cytochrome P450 genes involved in host plant utilization

inferredcites →https://doi.org/10.1111/j.1365-294x.2009.04313.xopenalex-snapshot

Genomic reaction norms: using integrative biology to understand molecular mechanisms of phenotypic plasticity

inferredcites →https://doi.org/10.1111/j.1365-294x.2012.05549.xopenalex-snapshot

Population transcriptomics of cactus host shifts in Drosophila mojavensis

inferredcites →https://doi.org/10.1111/j.1558-5646.2007.00203.xopenalex-snapshot

THE BALDWIN EFFECT AND GENETIC ASSIMILATION: REVISITING TWO MECHANISMS OF EVOLUTIONARY CHANGE MEDIATED BY PHENOTYPIC PLASTICITY

inferredcites →https://doi.org/10.1111/mec.12440openalex-snapshot

Mechanisms of macroevolution: polyphagous plasticity in butterfly larvae revealed by RNA ‐ S eq

inferredcites →https://doi.org/10.1111/mec.13188openalex-snapshot

Phenotypic plasticity in gene expression contributes to divergence of locally adapted populations of F undulus heteroclitus

inferredcites →https://doi.org/10.1111/mec.13191openalex-snapshot

Differences in performance and transcriptome‐wide gene expression associated with R hagoletis ( D iptera: T ephritidae) larvae feeding in alternate host fruit environments

inferredcites →https://doi.org/10.1111/mec.13330openalex-snapshot

Adaptation of a polyphagous herbivore to a novel host plant extensively shapes the transcriptome of herbivore and host

inferredcites →https://doi.org/10.1126/science.213.4510.905openalex-snapshot

Pesticides: Insecticides and Fungicides Are Chitin Synthesis Inhibitors

inferredcites →https://doi.org/10.1146/annurev.es.21.110190.001331openalex-snapshot

Host Specialization in Phytophagous Insects

inferredcites →https://doi.org/10.1186/1471-2105-12-323openalex-snapshot

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

inferredcites →https://doi.org/10.1186/1471-2148-6-4openalex-snapshot

Diversity begets diversity: host expansions and the diversification of plant-feeding insects

inferredcites →https://doi.org/10.1186/1471-2164-12-575openalex-snapshot

Transcriptional responses underlying the hormetic and detrimental effects of the plant secondary metabolite gossypol on the generalist herbivore Helicoverpa armigera

inferredcites →https://doi.org/10.1242/jeb.00709openalex-snapshot

Chitin metabolism in insects: structure, function and regulation of chitin synthases and chitinases

inferredcites →https://doi.org/10.1371/journal.pgen.1000999openalex-snapshot

Amplification of a Cytochrome P450 Gene Is Associated with Resistance to Neonicotinoid Insecticides in the Aphid Myzus persicae

inferredcites →https://doi.org/10.1371/journal.pone.0034008openalex-snapshot

Host Plant Adaptation in Drosophila mettleri Populations

inferredcites →https://doi.org/10.1371/journal.pone.0065859openalex-snapshot

Identification of Proteasome Subunit Beta Type 6 (PSMB6) Associated with Deltamethrin Resistance in Mosquitoes by Proteomic and Bioassay Analyses

inferredcites →https://doi.org/10.1534/genetics.107.083287openalex-snapshot

The Molecular Basis of Host Adaptation in Cactophilic Drosophila: Molecular Evolution of a GlutathioneS-Transferase Gene (GstD1) inDrosophila mojavensis

inferredcites →https://doi.org/10.1668/0003-1569(2001)041[0877:ciitcm]2.0.co;2openalex-snapshot

Chemical Interactions in the Cactus-Microorganism-Drosophila Model System of the Sonoran Desert1

inferredcites →https://doi.org/10.1890/11-0650.1openalex-snapshot

Revisiting the evolution of ecological specialization, with emphasis on insect–plant interactions

inferredcites →https://doi.org/10.5281/zenodo.10744812openalex-snapshot

Oviposition site preference of cactophilic Drosophila in the eremophila complex.

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Polyphagy and diversification in tussock moths: Support for the oscillation hypothesis from extreme generalists

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inferred← citeshttps://doi.org/10.1002/ece3.9258openalex-snapshot

Family dinner: Transcriptional plasticity of five Noctuidae (Lepidoptera) feeding on three host plant species

inferred← citeshttps://doi.org/10.1007/s10531-022-02513-7openalex-snapshot

DNA barcodes reveal the hidden arthropod diversity in a threatened cactus forest of the central Andes

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Dietary Variation Effect on Life History Traits and Energy Storage in Neotropical Species of Drosophila (Diptera; Drosophilidae)

inferred← citeshttps://doi.org/10.1016/j.cois.2019.08.011openalex-snapshot

Evolutionary genomics of host plant adaptation: insights from Drosophila

inferred← citeshttps://doi.org/10.1016/j.ibmb.2016.02.006openalex-snapshot

Diet dependent metabolic responses in three generalist insect herbivores Spodoptera spp

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Gene expression plasticity facilitates different host feeding in Ips sexdentatus (Coleoptera: Curculionidae: Scolytinae)

inferred← citeshttps://doi.org/10.1016/j.ijbiomac.2018.07.032openalex-snapshot

Transcriptomic analysis of differentially expressed genes and related pathways in Harmonia axyridis after sulfoxaflor exposure

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Sublethal toxicity, transgenerational effects, and transcriptome expression of the neonicotinoid pesticide cycloxaprid on demographic fitness of Coccinella septempunctata

inferred← citeshttps://doi.org/10.1016/j.tree.2019.10.014openalex-snapshot

Gene Expression and Diet Breadth in Plant-Feeding Insects: Summarizing Trends

inferred← citeshttps://doi.org/10.1016/j.ympev.2022.107653openalex-snapshot

Phylogenomics provides insights into the evolution of cactophily and host plant shifts in Drosophila

inferred← citeshttps://doi.org/10.1038/s41437-017-0016-3openalex-snapshot

The genetic architecture of ecological adaptation: intraspecific variation in host plant use by the lepidopteran crop pest Chloridea virescens

inferred← citeshttps://doi.org/10.1038/s41598-017-14137-xopenalex-snapshot

Comparative transcriptome analysis reveals host-associated differentiation in Chilo suppressalis (Lepidoptera: Crambidae)

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The Atlantic salmon (Salmo salar) antimicrobial peptide cathelicidin-2 is a molecular host-associated cue for the salmon louse (Lepeophtheirus salmonis)

inferred← citeshttps://doi.org/10.1093/g3journal/jkac153openalex-snapshot

Genomics analysis of Drosophila sechellia response to Morinda citrifolia fruit diet

inferred← citeshttps://doi.org/10.1093/gbe/evx029openalex-snapshot

Mating Changes Sexually Dimorphic Gene Expression in the Seed Beetle Callosobruchus maculatus

inferred← citeshttps://doi.org/10.1093/jee/tox029openalex-snapshot

Comparative Transcriptional Analysis of the Host-Specialized Aphids Aphis gossypii (Hemiptera: Aphididae)

inferred← citeshttps://doi.org/10.1093/jee/tox128openalex-snapshot

Gut Transcriptome Analysis Shows Different Food Utilization Efficiency by the Grasshopper Oedaleous asiaticus (Orthoptera: Acrididae)

inferred← citeshttps://doi.org/10.1093/jhered/esy043openalex-snapshot

Host Plant Adaptation in Cactophilic Species of the Drosophila buzzatii Cluster: Fitness and Transcriptomics

inferred← citeshttps://doi.org/10.1093/jhered/esy058openalex-snapshot

Detoxification Genes Differ Between Cactus-, Fruit-, and Flower-FeedingDrosophila

inferred← citeshttps://doi.org/10.1093/jisesa/ieac047openalex-snapshot

Role of Genes in Regulating Host Plants Expansion in Tephritid Fruit Flies (Diptera) and Potential for RNAi-Based Control

inferred← citeshttps://doi.org/10.1101/2022.07.16.500113openalex-snapshot

Genomic islands of divergence between Drosophila yakuba subspecies predominantly overlap with chromosomal inversions

inferred← citeshttps://doi.org/10.1101/618546openalex-snapshot

Transcriptomics of monarch butterflies ( Danaus plexippus ) reveals strong differential gene expression in response to host plant toxicity, but weak response to parasite infection

inferred← citeshttps://doi.org/10.1111/eea.13573openalex-snapshot

Transcriptional response in larvae of the generalist fruit fly Anastrepha obliqua feeding on three different tropical host plants

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Evolution of host acceptance and its reversibility in a seed beetle

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Host‐associated divergence in the activity of digestive enzymes in two populations of the gypsy moth Lymantria dispar (Lepidoptera: Erebidae)

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Derived esterase activity in Drosophila sechellia contributes to evolved octanoic acid resistance

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Insight into different host range of three planthoppers by transcriptomic and microbiomic analysis

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Gene expression responses of Bactrocera tryoni larvae feeding on different ripening stages of tomato fruit

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Differential gene expression according to race and host plant in the pea aphid

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Transcriptome modulation during host shift is driven by secondary metabolites in desert D rosophila

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The transcriptome response of Heliconius melpomene larvae to a novel host plant

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inferred← citeshttps://doi.org/10.1111/mec.17521openalex-snapshot

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inferred← citeshttps://doi.org/10.1186/s12864-021-07498-1openalex-snapshot

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inferred← citeshttps://doi.org/10.1186/s12864-022-08299-wopenalex-snapshot

Genomic insight into the scale specialization of the biological control agent Novius pumilus (Weise, 1892)

inferred← citeshttps://doi.org/10.1186/s12864-022-08745-9openalex-snapshot

Transcriptional responses are oriented towards different components of the rearing environment in two Drosophila sibling species

inferred← citeshttps://doi.org/10.1371/journal.pone.0176956openalex-snapshot

Gene expression plasticity across hosts of an invasive scale insect species

inferred← citeshttps://doi.org/10.1590/1678-4685-gmb-2023-0148openalex-snapshot

Transcriptional signature of host shift in the seed beetle Zabrotes subfasciatus

inferred← citeshttps://doi.org/10.3389/fevo.2022.957247openalex-snapshot

Evolution of the odorant-binding protein gene family in Drosophila

inferred← citeshttps://doi.org/10.3389/fphys.2018.00971openalex-snapshot

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inferred← citeshttps://doi.org/10.6084/m9.figshare.14227873openalex-snapshot

Additional file 10 of Comparative transcriptome analysis of the newly discovered insect vector of the pine wood nematode in China, revealing putative genes related to host plant adaptation

inferred← citeshttps://doi.org/10.6084/m9.figshare.14227876openalex-snapshot

Additional file 11 of Comparative transcriptome analysis of the newly discovered insect vector of the pine wood nematode in China, revealing putative genes related to host plant adaptation

inferred← citeshttps://doi.org/10.6084/m9.figshare.14227879openalex-snapshot

Additional file 12 of Comparative transcriptome analysis of the newly discovered insect vector of the pine wood nematode in China, revealing putative genes related to host plant adaptation

inferred← citeshttps://doi.org/10.6084/m9.figshare.14227882openalex-snapshot

Additional file 13 of Comparative transcriptome analysis of the newly discovered insect vector of the pine wood nematode in China, revealing putative genes related to host plant adaptation

inferred← citeshttps://doi.org/10.6084/m9.figshare.14227885openalex-snapshot

Additional file 1 of Comparative transcriptome analysis of the newly discovered insect vector of the pine wood nematode in China, revealing putative genes related to host plant adaptation

inferred← citeshttps://doi.org/10.6084/m9.figshare.14227888openalex-snapshot

Additional file 2 of Comparative transcriptome analysis of the newly discovered insect vector of the pine wood nematode in China, revealing putative genes related to host plant adaptation

inferred← citeshttps://doi.org/10.6084/m9.figshare.14227891openalex-snapshot

Additional file 3 of Comparative transcriptome analysis of the newly discovered insect vector of the pine wood nematode in China, revealing putative genes related to host plant adaptation

inferred← citeshttps://doi.org/10.6084/m9.figshare.14227894openalex-snapshot

Additional file 4 of Comparative transcriptome analysis of the newly discovered insect vector of the pine wood nematode in China, revealing putative genes related to host plant adaptation

inferred← citeshttps://doi.org/10.6084/m9.figshare.14227897openalex-snapshot

Additional file 5 of Comparative transcriptome analysis of the newly discovered insect vector of the pine wood nematode in China, revealing putative genes related to host plant adaptation

inferred← citeshttps://doi.org/10.6084/m9.figshare.14227900openalex-snapshot

Additional file 6 of Comparative transcriptome analysis of the newly discovered insect vector of the pine wood nematode in China, revealing putative genes related to host plant adaptation

inferred← citeshttps://doi.org/10.6084/m9.figshare.14227903openalex-snapshot

Additional file 7 of Comparative transcriptome analysis of the newly discovered insect vector of the pine wood nematode in China, revealing putative genes related to host plant adaptation

inferred← citeshttps://doi.org/10.6084/m9.figshare.14227906openalex-snapshot

Additional file 8 of Comparative transcriptome analysis of the newly discovered insect vector of the pine wood nematode in China, revealing putative genes related to host plant adaptation

inferred← citeshttps://doi.org/10.6084/m9.figshare.14227909openalex-snapshot

Additional file 9 of Comparative transcriptome analysis of the newly discovered insect vector of the pine wood nematode in China, revealing putative genes related to host plant adaptation

inferred← citeshttps://doi.org/10.6084/m9.figshare.20327443openalex-snapshot

Additional file 1 of Transcriptional responses are oriented towards different components of the rearing environment in two Drosophila sibling species

inferred← citeshttps://doi.org/10.6084/m9.figshare.20327446openalex-snapshot

Additional file 2 of Transcriptional responses are oriented towards different components of the rearing environment in two Drosophila sibling species

inferred← citeshttps://doi.org/10.6084/m9.figshare.20327449openalex-snapshot

Additional file 3 of Transcriptional responses are oriented towards different components of the rearing environment in two Drosophila sibling species

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