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A fast‐evolving X‐linked duplicate of importin‐α2 is overexpressed in sex‐ratio drive in Drosophila neotestacea

https://doi.org/10.1111/mec.14928
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Outgoing claims: the papers this work cites, builds on, or argues with.

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From FastQ Data to High‐Confidence Variant Calls: The Genome Analysis Toolkit Best Practices Pipeline
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Does genetic conflict drive rapid molecular evolution of nuclear transport genes in Drosophila?
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The hpRNA/RNAi Pathway Is Essential to Resolve Intragenomic Conflict in the Drosophila Male Germline
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The evolution of gene expression and the transcriptome–phenotype relationship
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Importin α: a multipurpose nuclear-transport receptor
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The Ecology and Evolutionary Dynamics of Meiotic Drive
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Sexual selection, genetic conflict, selfish genes, and the atypical patterns of gene expression in spermatogenic cells
inferredcites →https://doi.org/10.1016/s1047-8477(02)00543-9openalex-snapshot
Patterns of importin-α expression during Drosophila spermatogenesis
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Nuclear Mislocalization of Enzymatically Active RanGAP Causes Segregation Distortion in Drosophila
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KaKs_Calculator: Calculating Ka and Ks Through Model Selection and Model Averaging
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A protein kinase encoded by the t complex responder gene causes non-mendelian inheritance
inferredcites →https://doi.org/10.1038/hdy.2013.131openalex-snapshot
Male eyespan size is associated with meiotic drive in wild stalk-eyed flies (Teleopsis dalmanni)
inferredcites →https://doi.org/10.1038/nbt.2931openalex-snapshot
Normalization of RNA-seq data using factor analysis of control genes or samples
inferredcites →https://doi.org/10.1038/ng1617openalex-snapshot
The t complex–encoded GTPase-activating protein Tagap1 acts as a transmission ratio distorter in mice
inferredcites →https://doi.org/10.1038/nmeth.1923openalex-snapshot
Fast gapped-read alignment with Bowtie 2
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De novo transcript sequence reconstruction from RNA-Seq: reference generation and analysis with Trinity
inferredcites →https://doi.org/10.1038/nrm2114openalex-snapshot
Molecular mechanism of the nuclear protein import cycle
inferredcites →https://doi.org/10.1038/sj.emboj.7600843openalex-snapshot
Nup50/Npap60 function in nuclear protein import complex disassembly and importin recycling
inferredcites →https://doi.org/10.1038/sj.hdy.6886100openalex-snapshot
Are Drosophila SR drive chromosomes always balanced?
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Associations between mycophagous Drosophila and their Howardula nematode parasites: a worldwide phylogenetic shuffle
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Segregation distortion induced by wild-type RanGAP in Drosophila
inferredcites →https://doi.org/10.1073/pnas.1220610110openalex-snapshot
Choreography of importin-α/CAS complex assembly and disassembly at nuclear pores
inferredcites →https://doi.org/10.1073/pnas.1519332113openalex-snapshot
Rapid evolution of a Y-chromosome heterochromatin protein underlies sex chromosome meiotic drive
inferredcites →https://doi.org/10.1086/281969openalex-snapshot
Meiotic Drive as an Evolutionary Force
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The Genetic Basis of Transmission-Ratio Distortion and Male Sterility Due to the t Complex
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DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
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The Sequence Alignment/Map format and SAMtools
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edgeR : a Bioconductor package for differential expression analysis of digital gene expression data
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BEDTools: a flexible suite of utilities for comparing genomic features
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The variant call format and VCFtools
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Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
inferredcites →https://doi.org/10.1093/genetics/126.3.651openalex-snapshot
"Sex ratio" meiotic drive in Drosophila testacea.
inferredcites →https://doi.org/10.1093/genetics/128.4.841openalex-snapshot
Causes of sex ratio bias may account for unisexual sterility in hybrids: a new explanation of Haldane's rule and related phenomena.
inferredcites →https://doi.org/10.1093/genetics/161.1.157openalex-snapshot
Drosophila melanogaster Importin α1 and α3 Can Replace Importin α2 During Spermatogenesis but Not Oogenesis
inferredcites →https://doi.org/10.1093/genetics/89.1.171openalex-snapshot
POPULATION DYNAMICS OF THE SEGREGATION DISTORTER POLYMORPHISM OF DROSOPHILA MELANOGASTER
inferredcites →https://doi.org/10.1093/molbev/msm088openalex-snapshot
PAML 4: Phylogenetic Analysis by Maximum Likelihood
inferredcites →https://doi.org/10.1093/molbev/msm269openalex-snapshot
Selective Sweeps in a 2-Locus Model for Sex-Ratio Meiotic Drive in Drosophila simulans
inferredcites →https://doi.org/10.1093/molbev/msq334openalex-snapshot
Molecular Evolution of a Y Chromosome to Autosome Gene Duplication in Drosophila
inferredcites →https://doi.org/10.1093/molbev/msr306openalex-snapshot
Birth, Death, and Replacement of Karyopherins in Drosophila
inferredcites →https://doi.org/10.1093/nar/gks596openalex-snapshot
Primer3—new capabilities and interfaces
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UniProt: a hub for protein information
inferredcites →https://doi.org/10.1098/rspb.2013.1397openalex-snapshot
Association of polyandry andsex-ratiodrive prevalence in natural populations ofDrosophila neotestacea
inferredcites →https://doi.org/10.1101/gad.414807openalex-snapshot
The t-complex-encoded guanine nucleotide exchange factor Fgd2 reveals that two opposing signaling pathways promote transmission ratio distortion in the mouse
inferredcites →https://doi.org/10.1101/gr.185579.114openalex-snapshot
The Release 6 reference sequence of the Drosophila melanogaster genome
inferredcites →https://doi.org/10.1101/gr.6049openalex-snapshot
Retroposed New Genes Out of the X in Drosophila
inferredcites →https://doi.org/10.1111/evo.12658openalex-snapshot
Origin, evolution, and population genetics of the selfish Segregation Distorter gene duplication in European and African populations of Drosophila melanogaster
inferredcites →https://doi.org/10.1111/j.1558-5646.2011.01497.xopenalex-snapshot
LOCAL SELECTION UNDERLIES THE GEOGRAPHIC DISTRIBUTION OF SEX-RATIO DRIVE IN DROSOPHILA NEOTESTACEA
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Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing
inferredcites →https://doi.org/10.1111/jeb.12948openalex-snapshot
Occasional recombination of a selfish X‐chromosome may permit its persistence at high frequencies in the wild
inferredcites →https://doi.org/10.1111/jeb.13089openalex-snapshot
X chromosome drive in a widespread Palearctic woodland fly, Drosophila testacea
inferredcites →https://doi.org/10.1111/jeb.13140openalex-snapshot
Contrasting patterns of X‐chromosome divergence underlie multiple sex‐ratio polymorphisms in stalk‐eyed flies
inferredcites →https://doi.org/10.1111/mec.12097openalex-snapshot
Genomic conflict drives patterns of X ‐linked population structure in D rosophila neotestacea
inferredcites →https://doi.org/10.1126/science.1090042openalex-snapshot
Extensive Gene Traffic on the Mammalian X Chromosome
inferredcites →https://doi.org/10.1126/science.156.3774.477openalex-snapshot
Extraordinary Sex Ratios
inferredcites →https://doi.org/10.1126/science.283.5408.1742openalex-snapshot
Truncated RanGAP Encoded by the Segregation Distorter Locus of Drosophila
inferredcites →https://doi.org/10.1146/annurev-ecolsys-110411-160242openalex-snapshot
Nothing in Genetics Makes Sense Except in Light of Genomic Conflict
inferredcites →https://doi.org/10.1146/annurev.ecolsys.32.081501.113958openalex-snapshot
Sex Chromosome Meiotic Drive
inferredcites →https://doi.org/10.1146/annurev.genet.31.1.405openalex-snapshot
GERMLINE CYST FORMATION IN DROSOPHILA
inferredcites →https://doi.org/10.1146/annurev.genet.37.110801.143030openalex-snapshot
Transmission Ratio Distortion in Mice
inferredcites →https://doi.org/10.1186/1471-2105-10-421openalex-snapshot
BLAST+: architecture and applications
inferredcites →https://doi.org/10.1186/1471-2105-12-323openalex-snapshot
RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome
inferredcites →https://doi.org/10.1186/s13059-014-0550-8openalex-snapshot
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
inferredcites →https://doi.org/10.1371/journal.pbio.0050292openalex-snapshot
A sex-ratio Meiotic Drive System in Drosophila simulans. I: An Autosomal Suppressor
inferredcites →https://doi.org/10.1371/journal.pbio.0050293openalex-snapshot
A sex-ratio Meiotic Drive System in Drosophila simulans. II: An X-linked Distorter
inferredcites →https://doi.org/10.1371/journal.pgen.1004362openalex-snapshot
Meiotic Drive Impacts Expression and Evolution of X-Linked Genes in Stalk-Eyed Flies
inferredcites →https://doi.org/10.1371/journal.pone.0027254openalex-snapshot
Reduced Polymorphism Associated with X Chromosome Meiotic Drive in the Stalk-Eyed Fly Teleopsis dalmanni
inferredcites →https://doi.org/10.1534/g3.111.000315openalex-snapshot
Sequence Analysis of the Segmental Duplication Responsible for ParisSex-RatioDrive inDrosophila simulans
inferredcites →https://doi.org/10.1534/genetics.104.026500openalex-snapshot
The HKA Test Revisited
inferredcites →https://doi.org/10.1534/genetics.107.078865openalex-snapshot
Evolution in the Fast Lane: Rapidly Evolving Sex-Related Genes in Drosophila
inferredcites →https://doi.org/10.1534/genetics.107.086074openalex-snapshot
Polytene Chromosomal Maps of 11 Drosophila Species: The Order of Genomic Scaffolds Inferred From Genetic and Physical Maps
inferredcites →https://doi.org/10.1534/genetics.109.109587openalex-snapshot
Recurrent Selection on the Winters sex-ratio Genes in Drosophila simulans
inferredcites →https://doi.org/10.1534/genetics.112.141390openalex-snapshot
The SelfishSegregation DistorterGene Complex ofDrosophila melanogaster
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R: A Language and Environment for Statistical Computing
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Genes in Conflict

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1042/bst20231411openalex-snapshot
Non-Mendelian transmission of X chromosomes: mechanisms and impact on sex ratios and population dynamics in different breeding systems
inferred← citeshttps://doi.org/10.1093/gbe/evaf225openalex-snapshot
Comparative Genomics of the Testacea Group of Drosophila Reveals Introgression and Variation in Chromosome Size and Structure
inferred← citeshttps://doi.org/10.1098/rspb.2019.1430openalex-snapshot
Meiotic drive mechanisms: lessons fromDrosophila
inferred← citeshttps://doi.org/10.1098/rspb.2019.1534openalex-snapshot
An assessment of the immune costs associated with meiotic drive elements inDrosophila
inferred← citeshttps://doi.org/10.1098/rspb.2019.1927openalex-snapshot
Effects of a male meiotic driver on male and female transcriptomes in the house mouse
inferred← citeshttps://doi.org/10.1098/rspb.2021.1985openalex-snapshot
Novel patterns of expression and recruitment of new genes on the t -haplotype, a mouse selfish chromosome
inferred← citeshttps://doi.org/10.1098/rstb.2021.0208openalex-snapshot
Supergene potential of a selfish centromere
inferred← citeshttps://doi.org/10.1101/2021.09.30.462505openalex-snapshot
S. pombe wtf genes use dual transcriptional regulation and selective protein exclusion from spores to cause meiotic drive
inferred← citeshttps://doi.org/10.1111/jeb.13596openalex-snapshot
Autosomal suppression and fitness costs of an old driving X chromosome in Drosophila testacea
inferred← citeshttps://doi.org/10.1111/jeb.14077openalex-snapshot
Hoisted with his own petard: How sex‐ratio meiotic drive in Drosophila affinis creates resistance alleles that limit its spread
inferred← citeshttps://doi.org/10.1371/journal.pgen.1008350openalex-snapshot
Dramatically diverse Schizosaccharomyces pombe wtf meiotic drivers all display high gamete-killing efficiency
inferred← citeshttps://doi.org/10.1371/journal.pgen.1009847openalex-snapshot
S. pombe wtf drivers use dual transcriptional regulation and selective protein exclusion from spores to cause meiotic drive
inferred← citeshttps://doi.org/10.7554/elife.50026openalex-snapshot
The Wolbachia cytoplasmic incompatibility enzyme CidB targets nuclear import and protamine-histone exchange factors
inferred← citeshttps://doi.org/10.7554/elife.55694openalex-snapshot
The wtf4 meiotic driver utilizes controlled protein aggregation to generate selective cell death
inferred← citeshttps://doi.org/10.7554/elife.57936openalex-snapshot
Atypical meiosis can be adaptive in outcrossed Schizosaccharomyces pombe due to wtf meiotic drivers
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