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Natural variation of the wheat root exudate metabolome and its influence on biological nitrification inhibition activity

https://doi.org/10.1111/pbi.70248
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Metabolome fingerprinting reveals the presence of multiple nitrification inhibitors in biomass and root exudates of Thinopyrum intermedium
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Process for the integrated extraction, identification and quantification of metabolites, proteins and RNA to reveal their co‐regulation in biochemical networks
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Metabolomics in Plant Stress Physiology
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Metabolomics Data Analysis, Visualization, and Integration
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Multiomics for Crop Improvement
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Growth of Nitrosomonas europaea in batch and continuous culture
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A Physiological and Genomic Comparison of Nitrosomonas Cluster 6a and 7 Ammonia-Oxidizing Bacteria
inferredcites →https://doi.org/10.1007/s00374-015-1015-2openalex-snapshot
Influence of different trap solutions on the determination of root exudates in Lupinus albus L.
inferredcites →https://doi.org/10.1007/s00374-020-01533-1openalex-snapshot
Revisiting plant biological nitrification inhibition efficiency using multiple archaeal and bacterial ammonia-oxidising cultures
inferredcites →https://doi.org/10.1007/s00374-021-01577-xopenalex-snapshot
Biological nitrification inhibition in maize—isolation and identification of hydrophobic inhibitors from root exudates
inferredcites →https://doi.org/10.1007/s00374-021-01578-wopenalex-snapshot
Root exudation of contrasting drought-stressed pearl millet genotypes conveys varying biological nitrification inhibition (BNI) activity
inferredcites →https://doi.org/10.1007/s00374-021-01602-zopenalex-snapshot
Effects of the nitrification inhibitor 3,4-dimethylpyrazole phosphate (DMPP) on the activity and diversity of the soil microbial community under contrasting soil pH
inferredcites →https://doi.org/10.1007/s00374-022-01628-xopenalex-snapshot
Effects of synthetic nitrification inhibitor (3,4-dimethylpyrazole phosphate; DMPP) and biological nitrification inhibitor (methyl 3-(4-hydroxyphenyl) propionate; MHPP) on the gross N nitrification rate and ammonia oxidizers in two contrasting soils
inferredcites →https://doi.org/10.1007/s11104-006-9094-3openalex-snapshot
A bioluminescence assay to detect nitrification inhibitors released from plant roots: a case study with Brachiaria humidicola
inferredcites →https://doi.org/10.1007/s11104-006-9159-3openalex-snapshot
Biological nitrification inhibition (BNI)—is it a widespread phenomenon?
inferredcites →https://doi.org/10.1007/s11104-007-9360-zopenalex-snapshot
Can biological nitrification inhibition (BNI) genes from perennial Leymus racemosus (Triticeae) combat nitrification in wheat farming?
inferredcites →https://doi.org/10.1007/s11104-009-0266-9openalex-snapshot
Release of plant-borne flavonoids into the rhizosphere and their role in plant nutrition
inferredcites →https://doi.org/10.1007/s11104-009-9898-zopenalex-snapshot
Winter wheat roots grow twice as deep as spring wheat roots, is this important for N uptake and N leaching losses?
inferredcites →https://doi.org/10.1007/s11104-012-1419-9openalex-snapshot
Biological nitrification inhibition (BNI) activity in sorghum and its characterization
inferredcites →https://doi.org/10.1007/s11104-012-1494-yopenalex-snapshot
Effect of methyl 3-4-hydroxyphenyl propionate, a Sorghum root exudate, on N dynamic, potential nitrification activity and abundance of ammonia-oxidizing bacteria and archaea
inferredcites →https://doi.org/10.1007/s11104-016-2822-4openalex-snapshot
Identification of several wheat landraces with biological nitrification inhibition capacity
inferredcites →https://doi.org/10.1016/j.copbio.2018.01.014openalex-snapshot
Nitrification in agricultural soils: impact, actors and mitigation
inferredcites →https://doi.org/10.1016/j.envres.2022.115199openalex-snapshot
Heterotrophic nitrification-aerobic denitrification performance of a novel strain, Pseudomonas sp. B-1, isolated from membrane aerated biofilm reactor
inferredcites →https://doi.org/10.1016/j.fcr.2016.05.009openalex-snapshot
Does earlier sowing of winter wheat improve root growth and N uptake?
inferredcites →https://doi.org/10.1016/j.jenvman.2023.118996openalex-snapshot
Drug discovery-based approach identifies new nitrification inhibitors
inferredcites →https://doi.org/10.1016/j.jgg.2023.10.004openalex-snapshot
Two diversities meet in the rhizosphere: root specialized metabolites and microbiome
inferredcites →https://doi.org/10.1016/j.joule.2018.01.018openalex-snapshot
Alternative Bioenergy: Updates to and Challenges in Nitrification Metalloenzymology
inferredcites →https://doi.org/10.1016/j.phytochem.2014.10.003openalex-snapshot
Profiling of secondary metabolites in root exudates of Arabidopsis thaliana
inferredcites →https://doi.org/10.1016/j.plantsci.2015.01.012openalex-snapshot
Suppression of soil nitrification by plants
inferredcites →https://doi.org/10.1016/j.plaphy.2020.06.004openalex-snapshot
Brachialactone isomers and derivatives of Brachiaria humidicola reveal contrasting nitrification inhibiting activity
inferredcites →https://doi.org/10.1016/j.resmic.2020.01.003openalex-snapshot
Copper limiting threshold in the terrestrial ammonia oxidizing archaeon Nitrososphaera viennensis
inferredcites →https://doi.org/10.1016/j.rhisph.2018.06.004openalex-snapshot
Sampling root exudates – Mission impossible?
inferredcites →https://doi.org/10.1016/j.scitotenv.2020.143739openalex-snapshot
RETRACTED: Effects of the nitrification inhibitor nitrapyrin and mulch on N2O emission and fertilizer use efficiency using 15N tracing techniques
inferredcites →https://doi.org/10.1016/j.soilbio.2015.11.017openalex-snapshot
Evidence that the efficacy of the nitrification inhibitor dicyandiamide (DCD) is affected by soil properties in UK soils
inferredcites →https://doi.org/10.1016/j.soilbio.2016.12.029openalex-snapshot
Biological nitrification inhibition by Brachiaria grasses mitigates soil nitrous oxide emissions from bovine urine patches
inferredcites →https://doi.org/10.1016/j.soilbio.2018.11.008openalex-snapshot
Effects of the biological nitrification inhibitor 1,9-decanediol on nitrification and ammonia oxidizers in three agricultural soils
inferredcites →https://doi.org/10.1016/j.tplants.2022.08.016openalex-snapshot
PANOMICS at the interface of root–soil microbiome and BNI
inferredcites →https://doi.org/10.1016/j.tplants.2024.03.007openalex-snapshot
The era of panomics-driven gene discovery in plants
inferredcites →https://doi.org/10.1016/j.tplants.2025.03.001openalex-snapshot
Panomics to manage combined abiotic stresses in plants
inferredcites →https://doi.org/10.1016/j.tplants.2025.05.006openalex-snapshot
Natural variation of the holobiont for sustainable agroecosystems
inferredcites →https://doi.org/10.1016/s0045-6535(01)00287-9openalex-snapshot
Suppression of nitrification and N2O emission by karanjin––a nitrification inhibitor prepared from karanja (Pongamia glabra Vent.)
inferredcites →https://doi.org/10.1021/i560089a010openalex-snapshot
Colorimetric Method for Determination of Nitrate
inferredcites →https://doi.org/10.1023/b:fres.0000025287.52565.99openalex-snapshot
A meta-evaluation of nitrapyrin agronomic and environmental effectiveness with emphasis on corn production in the Midwestern USA
inferredcites →https://doi.org/10.1038/nature01014openalex-snapshot
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inferredcites →https://doi.org/10.1073/pnas.0903694106openalex-snapshot
Evidence for biological nitrification inhibition in Brachiaria pastures
inferredcites →https://doi.org/10.1073/pnas.1214272110openalex-snapshot
Hydroxylamine as an intermediate in ammonia oxidation by globally abundant marine archaea
inferredcites →https://doi.org/10.1073/pnas.1704504114openalex-snapshot
Nitric oxide is an obligate bacterial nitrification intermediate produced by hydroxylamine oxidoreductase
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The C-Glycosylation of Flavonoids in Cereals
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Application of Natural Blends of Phytochemicals Derived from the Root Exudates of Arabidopsis to the Soil Reveal That Phenolic-related Compounds Predominantly Modulate the Soil Microbiome
inferredcites →https://doi.org/10.1088/1748-9326/aa9ec9openalex-snapshot
Technical opportunities to reduce global anthropogenic emissions of nitrous oxide
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inferredcites →https://doi.org/10.1101/2024.12.03.626636openalex-snapshot
A fast-track, high-throughput screening platform for biological nitrification inhibitors discovery based on soil relevant ammonia oxidizing strains
inferredcites →https://doi.org/10.1101/gr.1239303openalex-snapshot
Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks
inferredcites →https://doi.org/10.1109/comitcon.2019.8862255openalex-snapshot
Genetic Algorithm- A Literature Review
inferredcites →https://doi.org/10.1111/nph.14057openalex-snapshot
Biological nitrification inhibition by rice root exudates and its relationship with nitrogen‐use efficiency
inferredcites →https://doi.org/10.1111/pbi.13372openalex-snapshot
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inferredcites →https://doi.org/10.1111/pbi.14203openalex-snapshot
Cell‐type proteomic and metabolomic resolution of early and late grain filling stages of wheat endosperm
inferredcites →https://doi.org/10.1111/pbi.14447openalex-snapshot
Natural variation in the chickpea metabolome under drought stress
inferredcites →https://doi.org/10.1111/ppl.14544openalex-snapshot
Accelerating wheat improvement through trait characterization: advances and perspectives
inferredcites →https://doi.org/10.1111/tpj.15410openalex-snapshot
Spatial distribution of proteins and metabolites in developing wheat grain and their differential regulatory response during the grain filling process
inferredcites →https://doi.org/10.1126/science.280.5360.112openalex-snapshot
Integration of Environmental, Agronomic, and Economic Aspects of Fertilizer Management
inferredcites →https://doi.org/10.1128/aem.01380-23openalex-snapshot
Assessing the activity of different plant-derived molecules and potential biological nitrification inhibitors on a range of soil ammonia- and nitrite-oxidizing strains
inferredcites →https://doi.org/10.1128/aem.64.10.3656-3662.1998openalex-snapshot
A Bioluminescence Assay Using Nitrosomonas europaea for Rapid and Sensitive Detection of Nitrification Inhibitors
inferredcites →https://doi.org/10.1128/mbio.02169-24openalex-snapshot
Adaptive traits of Nitrosocosmicus clade ammonia-oxidizing archaea
inferredcites →https://doi.org/10.1128/msphere.00821-24openalex-snapshot
“ Ca . Nitrosocosmicus” members are the dominant archaea associated with plant rhizospheres
inferredcites →https://doi.org/10.1186/1471-2105-11-395openalex-snapshot
MZmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data
inferredcites →https://doi.org/10.1371/journal.pcbi.1005752openalex-snapshot
mixOmics: An R package for ‘omics feature selection and multiple data integration
inferredcites →https://doi.org/10.2134/agronj1999.00021962009100030001xopenalex-snapshot
Improving Nitrogen Use Efficiency for Cereal Production
inferredcites →https://doi.org/10.32614/r.manualsopenalex-snapshot
R: A Language and Environment for Statistical Computing
inferredcites →https://doi.org/10.3389/fmicb.2020.581283openalex-snapshot
Comparison of Novel and Established Nitrification Inhibitors Relevant to Agriculture on Soil Ammonia- and Nitrite-Oxidizing Isolates
inferredcites →https://doi.org/10.3389/fmolb.2021.683671openalex-snapshot
Dissecting Metabolism of Leaf Nodules in Ardisia crenata and Psychotria punctata
inferredcites →https://doi.org/10.3389/fpls.2019.00157openalex-snapshot
Root Exudation of Primary Metabolites: Mechanisms and Their Roles in Plant Responses to Environmental Stimuli
inferredcites →https://doi.org/10.3389/fpls.2022.1099689openalex-snapshot
Syringic acid from rice roots inhibits soil nitrification and N2O emission under red and paddy soils but not a calcareous soil

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← backgroundhttps://doi.org/10.5281/zenodo.21336146zenodo-depositor-declared
inferred← citeshttps://doi.org/10.1007/s10311-026-01908-0openalex-snapshot
Lack of efficacy of reported plant metabolites to inhibit soil biological nitrification
inferred← citeshttps://doi.org/10.1007/s11104-026-08386-xopenalex-snapshot
Combining spring wheat genotypes with contrasting root traits for a better use of water resources in soil? Evidence from column-scale water stable isotopic experiments
inferred← citeshttps://doi.org/10.1007/s11157-026-09795-1openalex-snapshot
Nitrous oxide emission from croplands: biogeochemical drivers, nitrification inhibitors, policy implications, and future directions
inferred← citeshttps://doi.org/10.1007/s40502-026-00930-2openalex-snapshot
Aeroponics as a novel strategy to enrich stimulants in root exudates of Cynomorium songaricum host plant: A metabolomic perspective
inferred← citeshttps://doi.org/10.1016/j.agee.2025.110002openalex-snapshot
Harnessing biological nitrification inhibition to reduce soil nitrogen losses – Systematic quantification of plant and soil factors to maximise field-scale benefits
inferred← citeshttps://doi.org/10.1016/j.apsoil.2025.106758openalex-snapshot
Root exudate-mediated plant–microbe interactions and next-generation strategies for sustainable nitrogen management in agricultural soils
inferred← citeshttps://doi.org/10.1016/j.jplph.2026.154688openalex-snapshot
Multi-omics profiling identifies potential biological nitrification inhibitor 1,9-decanediol biosynthesis and secretion mechanisms in diverse rice varieties
inferred← citeshttps://doi.org/10.1016/j.plaphy.2026.111303openalex-snapshot
Benzoxazinoids as candidate compounds for biological nitrification inhibition in wheat
inferred← citeshttps://doi.org/10.1016/j.rhisph.2026.101450openalex-snapshot
Wheat root exudates modulate rhizosphere microbiome assembly and Rhizoctonia solani AG8 DNA abundance in two contrasting soils
inferred← citeshttps://doi.org/10.1093/sumbio/qvag034openalex-snapshot
Evidence of biological nitrification inhibition in barley to support sustainable nitrogen management
inferred← citeshttps://doi.org/10.2139/ssrn.6948602openalex-snapshot
Soil-type based effects of wheat root exudates on microbiome assembly and pathogen suppression
inferred← citeshttps://doi.org/10.31676/2073-4948-2026-84-15-30openalex-snapshot
Research into the phylogenetic structure of phytomicrobiome for use in plant breeding
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