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High‐throughput sequencing allowed the completion of the genome of grapevine Red Globe virus and revealed recurring co‐infection with other tymoviruses in grapevine

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1006/viro.1997.8555openalex-snapshot
Oat Blue Dwarf Marafivirus Resembles the Tymoviruses in Sequence, Genome Organization, and Expression Strategy
inferredcites →https://doi.org/10.1007/s007050050046openalex-snapshot
Grapevine fleck virus-like viruses in Vitis
inferredcites →https://doi.org/10.1007/s007050200045openalex-snapshot
The family Tymoviridae
inferredcites →https://doi.org/10.1007/s11262-015-1201-1openalex-snapshot
Detection and molecular characterisation of Grapevine Syrah virus-1 isolates from Central Europe
inferredcites →https://doi.org/10.1016/0042-6822(89)90198-0openalex-snapshot
Nucleotide sequence of the ononis yellow mosaic tymovirus genome
inferredcites →https://doi.org/10.1016/0042-6822(89)90606-5openalex-snapshot
Mechanism of synthesis of turnip yellow mosaic virus coat protein subgenomic RNA in vivo
inferredcites →https://doi.org/10.1016/j.jviromet.2016.03.005openalex-snapshot
MISIS-2: A bioinformatics tool for in-depth analysis of small RNAs and representation of consensus master genome in viral quasispecies
inferredcites →https://doi.org/10.1016/j.virol.2010.09.001openalex-snapshot
Deep sequencing analysis of viral short RNAs from an infected Pinot Noir grapevine
inferredcites →https://doi.org/10.1016/s0022-5193(05)80104-3openalex-snapshot
The general stochastic model of nucleotide substitution
inferredcites →https://doi.org/10.1023/a:1025164200412openalex-snapshot
Sequence Analysis of the 3′ end of Three Grapevine Fleck Virus-like Viruses from Grapevine
inferredcites →https://doi.org/10.1073/pnas.0404206101openalex-snapshot
Prospects for inferring very large phylogenies by using the neighbor-joining method
inferredcites →https://doi.org/10.1093/bioinformatics/btg180openalex-snapshot
MrBayes 3: Bayesian phylogenetic inference under mixed models
inferredcites →https://doi.org/10.1093/bioinformatics/btu032openalex-snapshot
jmodeltest.org: selection of nucleotide substitution models on the cloud
inferredcites →https://doi.org/10.1093/molbev/msw054openalex-snapshot
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
inferredcites →https://doi.org/10.1093/molbev/msw076openalex-snapshot
Are We What We Eat? Evidence of a Vegetarian Diet Permanently Shaping the Human Genome to Change Individual Risk of Cancer and Heart Disease
inferredcites →https://doi.org/10.1093/nar/18.5.1181openalex-snapshot
The tymobox, a sequence shared by most tymoviruses: its use in molecular studies of tymoviruses
inferredcites →https://doi.org/10.1093/nar/gku1221openalex-snapshot
CDD: NCBI's conserved domain database
inferredcites →https://doi.org/10.1094/pdis-03-16-0413-pdnopenalex-snapshot
First Report of Grapevine asteroid mosaic-associated virus and Grapevine rupestris vein feathering virus in Grapevines in Canada
inferredcites →https://doi.org/10.1094/pdis-06-16-0932-pdnopenalex-snapshot
First Report of Grapevine Red Globe virus in grapevine in Spain
inferredcites →https://doi.org/10.1094/pdis-10-14-1009-pdnopenalex-snapshot
First Report of Grapevine redglobe virus (GRGV) in Grapevine in France
inferredcites →https://doi.org/10.1094/pdis-12-15-1408-pdnopenalex-snapshot
First Report of Grapevine Syrah virus 1 in South African Grapevines
inferredcites →https://doi.org/10.1094/phyto-09-14-0241-ropenalex-snapshot
Genetic Variability of Grapevine Pinot gris virus and Its Association with Grapevine Leaf Mottling and Deformation
inferredcites →https://doi.org/10.1098/rspb.1985.0096openalex-snapshot
Evolutionary trees from nucleic acid and protein sequences
inferredcites →https://doi.org/10.1099/0022-1317-82-8-2009openalex-snapshot
Complete nucleotide sequence and genome organization of Grapevine fleck virus
inferredcites →https://doi.org/10.1111/j.1744-7348.2003.tb00260.xopenalex-snapshot
Nucleotide sequence variation in a small region of the Grapevine fleck virus replicase provides evidence for two sequence variants of the virus
inferredcites →https://doi.org/10.1128/jvi.79.5.3028-3037.2005openalex-snapshot
Identification and Genomic Characterization of a New Virus ( Tymoviridae Family) Associated with Citrus Sudden Death Disease
inferredcites →https://doi.org/10.1186/1471-2105-11-38openalex-snapshot
SeqTrim: a high-throughput pipeline for pre-processing any type of sequence read
inferredcites →https://doi.org/10.1186/1471-2105-4-29openalex-snapshot
MatGAT: An application that generates similarity/identity matrices using protein or DNA sequences
inferredcites →https://doi.org/10.1186/1756-0500-5-1openalex-snapshot
Peripheral blood gene expression: it all boils down to the RNA collection tubes
inferredcites →https://doi.org/10.1186/1756-0500-5-50openalex-snapshot
SSE: a nucleotide and amino acid sequence analysis platform
inferredcites →https://doi.org/10.14601/phytopathol_mediterr-15875openalex-snapshot
First detection of Grapevine rupestris stem pitting-associated virus and Grapevine rupestris vein feathering virus, and new phylogenetic groups for Grapevine fleck virus and Hop stunt viroid isolates, revealed from grapevine field surveys in Spain
inferredcites →https://doi.org/10.4454/jpp.v96i1supopenalex-snapshot
DIRECTORY OF VIRUS AND VIRUS-LIKE DISEASES OF THE GRAPEVINE AND THEIR AGENTS
inferredcites →https://doi.org/10.4454/jpp.v97i1.016openalex-snapshot
Biochar increases soil pH, but is as ineffective as liming at controlling clubroot.
inferredcites →https://doi.org/10.4454/jpp.v97i1.051openalex-snapshot
Grapevine leafroll associated virus 4 strain 9: complete genome and quantitative analysis of virus-derived small interfering RNA populations.
inferredcites →https://doi.org/10.5073/vitis.2001.40.65-68openalex-snapshot
Molecular detection of Grapevine fleck virus-like viruses

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.2139/ssrn.4655562openalex-extracted
Enhanced Detection and Identification of Grapevine Viruses: Development of Highly Sensitive Multiplex RT-PCR Assays for Improved Fruit Tree Health and Quarantine Measures
inferred← citeshttps://doi.org/10.1007/s00705-021-05082-2openalex-snapshot
Complete genome sequence of a novel citrus virus with characteristics of members of the family Tymoviridae
inferred← citeshttps://doi.org/10.1007/s00705-025-06346-xopenalex-snapshot
Genome characterization of prunus maculavirus 1 (PrMcV-1), a novel member of the genus maculavirus identified in prunus spp.
inferred← citeshttps://doi.org/10.1007/s42161-025-01871-9openalex-snapshot
A list of eclectic viruses, virus-like diseases and viroids of grapevines that should not be considered for regulatory oversight: a global plea from virologists
inferred← citeshttps://doi.org/10.1094/pdis-05-21-1069-pdnopenalex-snapshot
First Report of Grapevine Red Globe Virus, Grapevine Rupestris Vein Feathering Virus, and Grapevine Syrah Virus-1 Infecting Grapevine in Slovenia
inferred← citeshttps://doi.org/10.1128/mra.00434-22openalex-snapshot
Complete Genome Sequences of Grapevine Red Globe Virus in Japan
inferred← citeshttps://doi.org/10.1371/journal.pone.0198228openalex-snapshot
First natural crossover recombination between two distinct species of the family Closteroviridae leads to the emergence of a new disease
inferred← citeshttps://doi.org/10.2903/j.efsa.2019.5501openalex-snapshot
List of non‐EU viruses and viroids of Cydonia Mill., Fragaria L., Malus Mill., Prunus L., Pyrus L., Ribes L., Rubus L. and Vitis L.
inferred← citeshttps://doi.org/10.3389/fmicb.2018.00778openalex-snapshot
A Novel Hypovirus Species From Xylariaceae Fungi Infecting Avocado
inferred← citeshttps://doi.org/10.3389/fmicb.2018.01782openalex-snapshot
High-Throughput Sequencing and the Viromic Study of Grapevine Leaves: From the Detection of Grapevine-Infecting Viruses to the Description of a New Environmental Tymovirales Member
inferred← citeshttps://doi.org/10.3389/fmicb.2020.602039openalex-snapshot
Next-Generation Sequencing Combined With Conventional Sanger Sequencing Reveals High Molecular Diversity in Actinidia Virus 1 Populations From Kiwifruit Grown in China
inferred← citeshttps://doi.org/10.3389/fpls.2021.682879openalex-snapshot
High-Throughput Sequencing of Small RNAs for the Sanitary Certification of Viruses in Grapevine
inferred← citeshttps://doi.org/10.3390/plants10071487openalex-snapshot
High-Throughput Sequencing Indicates a Novel Marafivirus in Grapevine Showing Vein-Clearing Symptoms
inferred← citeshttps://doi.org/10.3390/plants15172698openalex-snapshot
Virome of the Russian Grapevine Germplasm: A Final Study and Summary
inferred← citeshttps://doi.org/10.3390/v13122432openalex-snapshot
High-Throughput Sequencing of Small RNAs for Diagnostics of Grapevine Viruses and Viroids in Russia
inferred← citeshttps://doi.org/10.3390/v14061314openalex-snapshot
Virome of Grapevine Germplasm from the Anapa Ampelographic Collection (Russia)
inferred← citeshttps://doi.org/10.3390/v15122429openalex-snapshot
Grapevine Virome of the Don Ampelographic Collection in Russia Has Concealed Five Novel Viruses
inferred← citeshttps://doi.org/10.3390/v16030343openalex-snapshot
Multiple Infections with Viruses of the Family Tymoviridae in Czech Grapevines
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