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Analysis of the MIR396 gene family and the role of MIR396b in regulating fiber length in cotton

https://doi.org/10.1111/ppl.13801
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1006/meth.2001.1262openalex-snapshot
Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method
inferredcites →https://doi.org/10.1007/pl00006994openalex-snapshot
Levels of Cytokinins in the Ovules of Cotton Mutants with Altered Fiber Development
inferredcites →https://doi.org/10.1007/s00122-012-1980-xopenalex-snapshot
Mapping quantitative trait loci for lint yield and fiber quality across environments in a Gossypium hirsutum × Gossypium barbadense backcross inbred line population
inferredcites →https://doi.org/10.1007/s00425-019-03271-7openalex-snapshot
Analysis of the MIR160 gene family and the role of MIR160a_A05 in regulating fiber length in cotton
inferredcites →https://doi.org/10.1007/s004250000496openalex-snapshot
A putative plant homolog of the yeast β-1,3-glucan synthase subunit FKS1 from cotton (Gossypium hirsutum L.) fibers
inferredcites →https://doi.org/10.1007/s00438-018-1424-7openalex-snapshot
QTL delineation for five fiber quality traits based on an intra-specific Gossypium hirsutum L. recombinant inbred line population
inferredcites →https://doi.org/10.1007/s00709-020-01556-3openalex-snapshot
MiR396 regulatory network and its expression during grain development in wheat
inferredcites →https://doi.org/10.1007/s10142-015-0452-1openalex-snapshot
miRNA-based drought regulation in wheat
inferredcites →https://doi.org/10.1007/s10681-008-9740-3openalex-snapshot
Fiber initiation development in Upland cotton (Gossypium hirsutum L.) cultivars varying in lint percentage
inferredcites →https://doi.org/10.1007/s10725-018-0406-4openalex-snapshot
Functional characterization of OsmiR396a in rice (Oryza sativa L.)
inferredcites →https://doi.org/10.1007/s11032-015-0232-6openalex-snapshot
Moderately enhancing cytokinin level by down-regulation of GhCKX expression in cotton concurrently increases fiber and seed yield
inferredcites →https://doi.org/10.1007/s11103-013-0066-8openalex-snapshot
Cotton PRP5 gene encoding a proline-rich protein is involved in fiber development
inferredcites →https://doi.org/10.1007/s11738-014-1767-6openalex-snapshot
Investigation of miR396 and growth-regulating factor regulatory network in maize grain filling
inferredcites →https://doi.org/10.1007/s12033-009-9163-yopenalex-snapshot
Expression of MicroRNAs in Cotton
inferredcites →https://doi.org/10.1007/s12042-017-9197-4openalex-snapshot
Phylogeny and Molecular Evolution of miR820 and miR396 microRNA Families in Oryza AA Genomes
inferredcites →https://doi.org/10.1016/j.cell.2009.01.046openalex-snapshot
Origin, Biogenesis, and Activity of Plant MicroRNAs
inferredcites →https://doi.org/10.1016/j.cj.2018.08.004openalex-snapshot
A comparative analysis of small RNAs between two Upland cotton backcross inbred lines with different fiber length: Expression and distribution
inferredcites →https://doi.org/10.1016/j.cj.2018.11.005openalex-snapshot
A targeted QTL analysis for fiber length using a genetic population between two introgressed backcrossed inbred lines in upland cotton (Gossypium hirsutum)
inferredcites →https://doi.org/10.1016/j.jgg.2012.04.008openalex-snapshot
Identification and Analyses of miRNA Genes in Allotetraploid Gossypium hirsutum Fiber Cells Based on the Sequenced Diploid G. raimondii Genome
inferredcites →https://doi.org/10.1016/j.jplph.2010.01.003openalex-snapshot
Gibberellin 20-oxidase promotes initiation and elongation of cotton fibers by regulating gibberellin synthesis
inferredcites →https://doi.org/10.1016/j.molcel.2004.05.027openalex-snapshot
Computational Identification of Plant MicroRNAs and Their Targets, Including a Stress-Induced miRNA
inferredcites →https://doi.org/10.1016/j.molp.2015.01.013openalex-snapshot
Growth-Regulating Factors (GRFs): A Small Transcription Factor Family with Important Functions in Plant Biology
inferredcites →https://doi.org/10.1016/j.molp.2020.05.006openalex-snapshot
The miR319-Targeted GhTCP4 Promotes the Transition from Cell Elongation to Wall Thickening in Cotton Fiber
inferredcites →https://doi.org/10.1016/j.pbi.2010.09.010openalex-snapshot
How cotton fibers elongate: a tale of linear cell-growth mode
inferredcites →https://doi.org/10.1016/j.pbi.2019.09.008openalex-snapshot
MicroRNA miR396, GRF transcription factors and GIF co-regulators: a conserved plant growth regulatory module with potential for breeding and biotechnology
inferredcites →https://doi.org/10.1016/j.pbi.2020.10.007openalex-snapshot
MIXTAs and phytohormones orchestrate cotton fiber development
inferredcites →https://doi.org/10.1016/j.plaphy.2013.12.003openalex-snapshot
A MADS-box gene is specifically expressed in fibers of cotton (Gossypium hirsutum) and influences plant growth of transgenic Arabidopsis in a GA-dependent manner
inferredcites →https://doi.org/10.1023/b:plan.0000028788.96381.47openalex-snapshot
Characterization of the Brassinosteroid Insensitive 1 Genes of Cotton
inferredcites →https://doi.org/10.1038/nbt.1843openalex-snapshot
Spatiotemporal manipulation of auxin biosynthesis in cotton ovule epidermal cells enhances fiber yield and quality
inferredcites →https://doi.org/10.1038/ncomms4050openalex-snapshot
miR828 and miR858 regulate homoeologous MYB2 gene functions in Arabidopsis trichome and cotton fibre development
inferredcites →https://doi.org/10.1038/ncomms6519openalex-snapshot
Control of cotton fibre elongation by a homeodomain transcription factor GhHOX3
inferredcites →https://doi.org/10.1038/s41438-021-00474-6openalex-snapshot
Genome-wide analysis of changes in miRNA and target gene expression reveals key roles in heterosis for Chinese cabbage biomass
inferredcites →https://doi.org/10.1038/s41588-018-0282-xopenalex-snapshot
Reference genome sequences of two cultivated allotetraploid cottons, Gossypium hirsutum and Gossypium barbadense
inferredcites →https://doi.org/10.1038/s41588-019-0371-5openalex-snapshot
Gossypium barbadense and Gossypium hirsutum genomes provide insights into the origin and evolution of allotetraploid cotton
inferredcites →https://doi.org/10.1038/srep39373openalex-snapshot
Deep sequencing of wheat sRNA transcriptome reveals distinct temporal expression pattern of miRNAs in response to heat, light and UV
inferredcites →https://doi.org/10.1093/abbs/gmr056openalex-snapshot
1-Aminocyclopropane-1-carboxylic acid synthase 2 is phosphorylated by calcium-dependent protein kinase 1 during cotton fiber elongation
inferredcites →https://doi.org/10.1093/molbev/msy096openalex-snapshot
MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms
inferredcites →https://doi.org/10.1093/pcp/pch098openalex-snapshot
Whole Genome Analysis of the OsGRF Gene Family Encoding Plant-Specific Putative Transcription Activators in Rice (Oryza sativa L.)
inferredcites →https://doi.org/10.1104/pp.010724openalex-snapshot
Cotton Fiber Growth in Planta and in Vitro. Models for Plant Cell Elongation and Cell Wall Biogenesis
inferredcites →https://doi.org/10.1104/pp.109.135459openalex-snapshot
A Specialized Outer Layer of the Primary Cell Wall Joins Elongating Cotton Fibers into Tissue-Like Bundles
inferredcites →https://doi.org/10.1104/pp.111.186742openalex-snapshot
GbPDF1 Is Involved in Cotton Fiber Initiation via the Core cis-Element HDZIP2ATATHB2
inferredcites →https://doi.org/10.1104/pp.114.235564openalex-snapshot
OsmiR396d-Regulated OsGRFs Function in Floral Organogenesis in Rice through Binding to Their Targets OsJMJ706 and OsCR4
inferredcites →https://doi.org/10.1104/pp.19.00639openalex-snapshot
Rice Homeobox Protein KNAT7 Integrates the Pathways Regulating Cell Expansion and Wall Stiffness
inferredcites →https://doi.org/10.1104/pp.20.00302openalex-snapshot
Rice GROWTH-REGULATING FACTOR7 Modulates Plant Architecture through Regulating GA and Indole-3-Acetic Acid Metabolism
inferredcites →https://doi.org/10.1105/tpc.104.024844openalex-snapshot
Control of Plant Trichome Development by a Cotton Fiber MYB Gene[W]
inferredcites →https://doi.org/10.1105/tpc.104.029629openalex-snapshot
The Cotton ACTIN1 Gene Is Functionally Expressed in Fibers and Participates in Fiber Elongation
inferredcites →https://doi.org/10.1105/tpc.105.040303openalex-snapshot
Transcriptome Profiling, Molecular Biological, and Physiological Studies Reveal a Major Role for Ethylene in Cotton Fiber Cell Elongation
inferredcites →https://doi.org/10.1105/tpc.108.064311openalex-snapshot
Criteria for Annotation of Plant MicroRNAs
inferredcites →https://doi.org/10.1105/tpc.111.094144openalex-snapshot
Effective Small RNA Destruction by the Expression of a Short Tandem Target Mimic in Arabidopsis
inferredcites →https://doi.org/10.1105/tpc.15.00452openalex-snapshot
MicroRNA miR396 Regulates the Switch between Stem Cells and Transit-Amplifying Cells in Arabidopsis Roots
inferredcites →https://doi.org/10.1105/tpc.19.00784openalex-snapshot
GROWTH-REGULATING FACTORS Interact with DELLAs and Regulate Growth in Cold Stress
inferredcites →https://doi.org/10.1111/j.1365-313x.2009.03847.xopenalex-snapshot
The MYB transcription factor GhMYB25 regulates early fibre and trichome development
inferredcites →https://doi.org/10.1111/j.1365-313x.2012.05003.xopenalex-snapshot
Epidermal cell differentiation in cotton mediated by the homeodomain leucine zipper gene, GhHD‐1
inferredcites →https://doi.org/10.1111/nph.12824openalex-snapshot
PAG1 , a cotton brassinosteroid catabolism gene, modulates fiber elongation
inferredcites →https://doi.org/10.1111/nph.13860openalex-snapshot
Small interfering RNA s from bidirectional transcripts of Gh MML 3_A12 regulate cotton fiber development
inferredcites →https://doi.org/10.1111/nph.15620openalex-snapshot
Cotton fiber elongation requires the transcription factor Gh MYB 212 to regulate sucrose transportation into expanding fibers
inferredcites →https://doi.org/10.1111/pbi.12169openalex-snapshot
A versatile system for functional analysis of genes and micro RNA s in cotton
inferredcites →https://doi.org/10.1111/pbi.13662openalex-snapshot
Genetic variation in MYB5_A12 is associated with fibre initiation and elongation in tetraploid cotton
inferredcites →https://doi.org/10.1111/pbi.13874openalex-snapshot
Expressed genes and their new alleles identification during fibre elongation reveal the genetic factors underlying improvements of fibre length in cotton
inferredcites →https://doi.org/10.1111/tpj.13273openalex-snapshot
Gh JAZ 2 negatively regulates cotton fiber initiation by interacting with the R2R3‐ MYB transcription factor Gh MYB 25‐like
inferredcites →https://doi.org/10.1146/annurev.arplant.52.1.67openalex-snapshot
H OW G IBBERELLIN R EGULATES P LANT G ROWTH AND D EVELOPMENT : A Molecular Genetic Analysis of Gibberellin Signaling
inferredcites →https://doi.org/10.1186/1471-2164-10-457openalex-snapshot
Enrichment of a set of microRNAs during the cotton fiber development
inferredcites →https://doi.org/10.1186/gb-2009-10-11-r122openalex-snapshot
Genome-wide analysis reveals rapid and dynamic changes in miRNA and siRNA sequence and expression during ovule and fiber development in allotetraploid cotton (Gossypium hirsutum L.)
inferredcites →https://doi.org/10.1186/s12864-017-3556-2openalex-snapshot
Response of microRNAs to cold treatment in the young spikes of common wheat
inferredcites →https://doi.org/10.1186/s12864-017-3812-5openalex-snapshot
Identification of candidate genes for fiber length quantitative trait loci through RNA-Seq and linkage and physical mapping in cotton
inferredcites →https://doi.org/10.1186/s12864-018-5294-5openalex-snapshot
A high density SLAF-SNP genetic map and QTL detection for fibre quality traits in Gossypium hirsutum
inferredcites →https://doi.org/10.1186/s12864-018-5309-2openalex-snapshot
Genetic variation of dynamic fiber elongation and developmental quantitative trait locus mapping of fiber length in upland cotton (Gossypium hirsutum L.)
inferredcites →https://doi.org/10.1186/s12870-020-2296-7openalex-snapshot
Identification of microRNAs in developing wheat grain that are potentially involved in regulating grain characteristics and the response to nitrogen levels
inferredcites →https://doi.org/10.1186/s42397-019-0031-4openalex-snapshot
Genetic analysis of yield and fiber quality traits in upland cotton (Gossypium hirsutum L.) cultivated in different ecological regions of China
inferredcites →https://doi.org/10.1186/s42397-020-00075-zopenalex-snapshot
Identification of candidate genes controlling fiber quality traits in upland cotton through integration of meta-QTL, significant SNP and transcriptomic data
inferredcites →https://doi.org/10.1371/journal.pgen.1002419openalex-snapshot
Functional Specialization of the Plant miR396 Regulatory Network through Distinct MicroRNA–Target Interactions
inferredcites →https://doi.org/10.1371/journal.pone.0054148openalex-snapshot
Characterization and Expression Patterns of microRNAs Involved in Rice Grain Filling
inferredcites →https://doi.org/10.1371/journal.pone.0129854openalex-snapshot
Comparative Transcriptomics Reveals Jasmonic Acid-Associated Metabolism Related to Cotton Fiber Initiation
inferredcites →https://doi.org/10.2135/cropsci2018.03.0184openalex-snapshot
Unraveling Cotton Fiber Development Using Fiber Mutants in the Post‐Genomic Era
inferredcites →https://doi.org/10.3389/fpls.2018.01999openalex-snapshot
miR396-OsGRFs Module Balances Growth and Rice Blast Disease-Resistance
inferredcites →https://doi.org/10.3389/fpls.2019.00087openalex-snapshot
A Pivotal Role of Hormones in Regulating Cotton Fiber Development
inferredcites →https://doi.org/10.3389/fpls.2019.01585openalex-snapshot
Fiber Quality Improvement in Upland Cotton (Gossypium hirsutum L.): Quantitative Trait Loci Mapping and Marker Assisted Selection Application
inferredcites →https://doi.org/10.3390/ijmsopenalex-snapshot
International Journal of Molecular Sciences
inferredcites →https://doi.org/10.3390/ijms20205221openalex-snapshot
The miR396–GRF Regulatory Module Controls the Embryogenic Response in Arabidopsis via an Auxin-Related Pathway
inferredcites →https://doi.org/10.3390/plants8020047openalex-snapshot
Intrusive Growth of Phloem Fibers in Flax Stem: Integrated Analysis of miRNA and mRNA Expression Profiles

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Incoming claims: where this work appears in other papers’ reference lists and arguments.

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inferred← citeshttps://doi.org/10.1007/978-3-031-84605-2_3openalex-snapshot
Development of Genetic Mapping Populations and Detection of Molecular Markers in Cotton
inferred← citeshttps://doi.org/10.1007/s10142-024-01420-0openalex-snapshot
Integrative analyses of long and short-read RNA sequencing reveal the spliced isoform regulatory network of seedling growth dynamics in upland cotton
inferred← citeshttps://doi.org/10.1007/s44372-026-00528-wopenalex-snapshot
Elucidating the functional mechanisms of the miR396–GRF4 pathway in rice development and stress response
inferred← citeshttps://doi.org/10.1016/j.indcrop.2026.123266openalex-snapshot
Genome‑wide association study identifies GhCLASRP as a key candidate gene for fiber elongation in upland cotton
inferred← citeshttps://doi.org/10.1016/j.plantsci.2026.113410openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.plgene.2025.100504openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.tplants.2025.10.011openalex-snapshot
Manipulating microRNAs to enhance biomass yield and biofuel production
inferred← citeshttps://doi.org/10.1093/bib/bbaf062openalex-snapshot
CSGDN: contrastive signed graph diffusion network for predicting crop gene–phenotype associations
inferred← citeshttps://doi.org/10.1111/jipb.70213openalex-snapshot
Recent advances in genetic control of fiber length in upland cotton
inferred← citeshttps://doi.org/10.1111/ppl.14303openalex-snapshot
Co‐localization and analysis of miR477b with fiber length quantitative trait loci in cotton
inferred← citeshttps://doi.org/10.3390/ijms25105518openalex-snapshot
Differential Transcription Profiling Reveals the MicroRNAs Involved in Alleviating Damage to Photosynthesis under Drought Stress during the Grain Filling Stage in Wheat
inferred← citeshttps://doi.org/10.3390/ijms27010228openalex-snapshot
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inferred← citeshttps://doi.org/10.3390/plants12173157openalex-snapshot
Identification of Differentially Expressed lncRNAs in Response to Blue Light and Expression Pattern Analysis of Populus tomentosa Hybrid Poplar 741
inferred← citeshttps://doi.org/10.3390/plants14081203openalex-snapshot
Genes Affecting Cotton Fiber Length: A Systematic Review and Meta-Analysis
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