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H3K4me3 plays a key role in establishing permissive chromatin states during bud dormancy and bud break in apple
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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Genome-wide changes in histone H3 lysine 27 trimethylation associated with bud dormancy release in peach
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Effects of gibberellins A4 on budbreak, antioxidant enzymes’ activity and proline content of flower buds in sweet cherry (Prunus avium)
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Chilling and gibberellin acids hyperinduce β-1,3-glucanases to reopen transport corridor and break endodormancy in tree peony (Paeonia suffruticosa)
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Knowing when to grow: signals regulating bud dormancy
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Cold-induced silencing by long antisense transcripts of an Arabidopsis Polycomb target
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High-quality de novo assembly of the apple genome and methylome dynamics of early fruit development
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On the language and physiology of dormancy and quiescence in plants
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MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
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deepTools: a flexible platform for exploring deep-sequencing data
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FLC: A Hidden Polycomb Response Element Shows Up in Silence
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Embryonic reactivation of FLOWERING LOCUS C by ABSCISIC ACID-INSENSITIVE 3 establishes the vernalization requirement in each Arabidopsis generation
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FLOWERING LOCUS C Encodes a Novel MADS Domain Protein That Acts as a Repressor of Flowering
inferredcites →https://doi.org/10.1105/tpc.110.081307openalex-snapshot
Chilling of Dormant Buds HyperinducesFLOWERING LOCUS Tand Recruits GA-Inducible 1,3-β-Glucanases to Reopen Signal Conduits and Release Dormancy inPopulus
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inferredcites →https://doi.org/10.1111/j.1469-8137.2011.03863.xopenalex-snapshot
Histone modifications and expression of DAM6 gene in peach are modulated during bud dormancy release in a cultivar‐dependent manner
inferredcites →https://doi.org/10.1111/jipb.12485openalex-snapshot
Transcription factors AS1 and AS2 interact with LHP1 to repress KNOX genes in Arabidopsis
inferredcites →https://doi.org/10.1111/nph.17710openalex-snapshot
Unraveling the role of MADS transcription factor complexes in apple tree dormancy
inferredcites →https://doi.org/10.1111/nph.17916openalex-snapshot
A MADS‐box gene with similarity to FLC is induced by cold and correlated with epigenetic changes to control budbreak in kiwifruit
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Histone modification and signalling cascade of the dormancy‐associated MADS ‐box gene, PpMADS 13‐1, in J apanese pear ( P yrus pyrifolia) during endodormancy
inferredcites →https://doi.org/10.1111/pce.13744openalex-snapshot
ABA‐responsive ABRE‐BINDING FACTOR3 activates DAM3 expression to promote bud dormancy in Asian pear
inferredcites →https://doi.org/10.1126/science.1197349openalex-snapshot
Vernalization-Mediated Epigenetic Silencing by a Long Intronic Noncoding RNA
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A Role for Flavin Monooxygenase-Like Enzymes in Auxin Biosynthesis
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The Proceedings of the National Academy of Sciences
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Photoperiodic control of seasonal growth is mediated by ABA acting on cell-cell communication
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Regulation of potato tuber dormancy and sprouting
inferredcites →https://doi.org/10.1186/gb-2009-10-6-r62openalex-snapshot
Genome-wide analysis of mono-, di- and trimethylation of histone H3 lysine 4 in Arabidopsis thaliana
inferredcites →https://doi.org/10.1186/s13059-014-0550-8openalex-snapshot
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
inferredcites →https://doi.org/10.1186/s13148-016-0179-4openalex-snapshot
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inferredcites →https://doi.org/10.1371/journal.pbio.0050129openalex-snapshot
Whole-Genome Analysis of Histone H3 Lysine 27 Trimethylation in Arabidopsis
inferredcites →https://doi.org/10.1371/journal.pcbi.1002195openalex-snapshot
Accelerated Profile HMM Searches
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REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms
inferredcites →https://doi.org/10.1371/journal.pone.0065598openalex-snapshot
diffReps: Detecting Differential Chromatin Modification Sites from ChIP-seq Data with Biological Replicates
inferredcites →https://doi.org/10.1371/journal.pone.0214788openalex-snapshot
Overexpression of Prunus DAM6 inhibits growth, represses bud break competency of dormant buds and delays bud outgrowth in apple plants
inferredcites →https://doi.org/10.21273/hortsci.22.3.371openalex-snapshot
Endo-, Para-, and Ecodormancy: Physiological Terminology and Classification for Dormancy Research
inferredcites →https://doi.org/10.21273/jashs04345-18openalex-snapshot
RNA-sequencing Analysis Identifies Genes Associated with Chilling-mediated Endodormancy Release in Apple
inferredcites →https://doi.org/10.3389/fpls.2014.00247openalex-snapshot
Epigenetic regulation of bud dormancy events in perennial plants
inferredcites →https://doi.org/10.3389/fpls.2014.00732openalex-snapshot
Vernalization and the chilling requirement to exit bud dormancy: shared or separate regulation?
inferredcites →https://doi.org/10.3389/fpls.2018.00657openalex-snapshot
Bud Dormancy in Perennial Fruit Tree Species: A Pivotal Role for Oxidative Cues
inferredcites →https://doi.org/10.3389/fpls.2018.01990openalex-snapshot
I Want to (Bud) Break Free: The Potential Role of DAM and SVP-Like Genes in Regulating Dormancy Cycle in Temperate Fruit Trees
inferredcites →https://doi.org/10.3389/fpls.2019.00412openalex-snapshot
Engineering Tree Seasonal Cycles of Growth Through Chromatin Modification
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Hormonal Orchestration of Bud Dormancy Cycle in Deciduous Woody Perennials
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Changes in Reactive Oxygen Species, Antioxidants and Carbohydrate Metabolism in Relation to Dormancy Transition and Bud Break in Apple (Malus × domestica Borkh) Cultivars
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International Journal of Molecular Sciences
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The Role of Auxin in Cell Wall Expansion
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Constitutive Expression of an Apple FLC3-like Gene Promotes Flowering in Transgenic Blueberry under Nonchilling Conditions
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fluff: exploratory analysis and visualization of high-throughput sequencing data
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
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inferred← citeshttps://doi.org/10.1016/j.hpj.2023.06.001openalex-snapshot
Peculiarity of transcriptional and H3K27me3 dynamics during peach bud dormancy
inferred← citeshttps://doi.org/10.1016/j.hpj.2025.09.005openalex-snapshot
Epigenetics and epigenomics studies in horticultural plants
inferred← citeshttps://doi.org/10.1016/j.ijbiomac.2025.146910openalex-snapshot
Identification of JmjC-domain-containing histone demethylases in sweet cherry reveals PavJMJ12 is required for bud dormancy release
inferred← citeshttps://doi.org/10.1016/j.indcrop.2026.123009openalex-snapshot
Molecular mechanisms of seasonal adaptation in perennial trees: Implications for biotechnology-driven breeding
inferred← citeshttps://doi.org/10.1016/j.plaphy.2025.110192openalex-snapshot
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inferred← citeshttps://doi.org/10.1093/hr/uhaf043openalex-snapshot
MADS-domain transcription factor AGAMOUS LIKE-9 participates in the gibberellin pathway to promote bud dormancy release of tree peony
inferred← citeshttps://doi.org/10.1093/jxb/erae054openalex-snapshot
Epigenetics and plant hormone dynamics: a functional and methodological perspective
inferred← citeshttps://doi.org/10.1093/jxb/erae182openalex-snapshot
Physiological and molecular mechanisms associated with potato tuber dormancy
inferred← citeshttps://doi.org/10.1093/jxb/erae205openalex-snapshot
Histone modifications affecting plant dormancy and dormancy release: common regulatory effects on hormone metabolism
inferred← citeshttps://doi.org/10.1093/jxb/erae371openalex-snapshot
Altered expression of a raspberry homologue of VRN1 is associated with disruption of dormancy induction and misregulation of subsets of dormancy-associated genes
inferred← citeshttps://doi.org/10.1093/jxb/erag128openalex-snapshot
From chill to bloom: seasonal coordination of reproductive development in peach and temperate fruit trees
inferred← citeshttps://doi.org/10.1093/plcell/koag018openalex-snapshot
Epigenetic reprogramming drives the annual growth–dormancy cycle in Populus
inferred← citeshttps://doi.org/10.1093/plphys/kiad026openalex-snapshot
BASIC PENTACYSTEINE2 fine-tunes corm dormancy release in Gladiolus
inferred← citeshttps://doi.org/10.1093/plphys/kiad291openalex-snapshot
MADS-box protein PpDAM6 regulates chilling requirement-mediated dormancy and bud break in peach
inferred← citeshttps://doi.org/10.1093/plphys/kiae619openalex-snapshot
Histone modification H3K27me3 is essential during chilling-induced flowering in Litchi chinensis
inferred← citeshttps://doi.org/10.1093/plphys/kiag295openalex-snapshot
ATX1-COMPASS-like complex participates in the bud dormancy release of tree peony by regulating H3K4me3 modification
inferred← citeshttps://doi.org/10.1093/treephys/tpae072openalex-snapshot
Deep learning with a small dataset predicts chromatin remodelling contribution to winter dormancy of apple axillary buds
inferred← citeshttps://doi.org/10.1093/treephys/tpag120openalex-snapshot
Low ambient temperature induces flowering of Osmanthus fragrans via SOC1A/SOC1B protein complex-mediated activation of FT
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Silencing of a raspberry homologue of VRN1 is associated with disruption of dormancy induction and misregulation of subsets of dormancy-associated genes
inferred← citeshttps://doi.org/10.1101/2025.01.11.632540openalex-snapshot
OVEREXPRESSION OF TEMPRANILLO-LIKE PROTEINS PROMOTES ENDORMANCY RELEASE IN POPLAR
inferred← citeshttps://doi.org/10.1111/pce.14562openalex-snapshot
Light on perenniality: Para‐dormancy is based on ABA‐GA antagonism and endo‐dormancy on the shutdown of GA biosynthesis
inferred← citeshttps://doi.org/10.1111/pce.15313openalex-snapshot
CONSTANS‐Like and SHORT VEGETATIVE PHASE‐Like Genes Coordinately Modulate TERMINAL FLOWER 2 to Control Dormancy Transitions in Pinus tabuliformis
inferred← citeshttps://doi.org/10.1111/pce.70182openalex-snapshot
Overexpression of Tempranillo‐Like Proteins Promotes Dormancy Release in Poplar
inferred← citeshttps://doi.org/10.1111/pce.70668openalex-snapshot
PpERF27–PpCBF2/4 Module Integrates Low‐Temperature and Ethylene Signals to Activate Abscisic Acid and DAM Pathways to Promote Bud Endodormancy in Peach
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Natural variants of AGL80.5 and FPA.3 contribute to bud break timing in poplar by controlling auxin biosynthesis
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Characterization of the Cannabis sativa glandular trichome epigenome
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Malate metabolism in horticultural crops: mechanistic insights and agricultural practices for quality improvement
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PsGA2ox2 is a novel target of miR159 involved in endodormancy regulation in tree peony (Paeonia suffruticosa)
inferred← citeshttps://doi.org/10.17660/actahortic.2023.1372.13openalex-snapshot
Co-expression network analysis of the H3K27me3/H3K4me3-modified genes correlated with chilling accumulation in apple dormant flower buds
inferred← citeshttps://doi.org/10.3389/fpls.2023.1321555openalex-snapshot
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Integrated BSA-Seq and WGCNA Analyses Reveal Candidate Genes Associated with Winter Bud Dormancy Maintenance in Fruit Mulberry (Morus spp.)
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Molecular Mechanisms of Seasonal Gene Expression in Trees
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Single-Bud Expression Analysis of Bud Dormancy Factors in Peach
inferred← citeshttps://doi.org/10.48130/forres-0024-0027openalex-snapshot
Alternative splicing of the FLOWERING LOCUS C-like gene MaMADS33 is associated with endodormancy in mulberry
inferred← citeshttps://doi.org/10.48130/frures-0026-0036openalex-snapshot
Low-chill apples: genetics of crisis and opportunity in a valuable fruit crop
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