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Integrative analysis in Pinus revealed long‐term heat stress splicing memory
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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Epigenetics in Alternative Pre-mRNA Splicing
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Phytophthora Effectors Modulate Genome-wide Alternative Splicing of Host mRNAs to Reprogram Plant Immunity
inferredcites →https://doi.org/10.1016/j.tplants.2017.09.019openalex-snapshot
Alternative Splicing Control of Abiotic Stress Responses
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Perspective on Alternative Splicing and Proteome Complexity in Plants
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Emerging Plant Thermosensors: From RNA to Protein
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Fast gapped-read alignment with Bowtie 2
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Wisdom of crowds for robust gene network inference
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Natural variation at FLM splicing has pleiotropic effects modulating ecological strategies in Arabidopsis thaliana
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A genome for gnetophytes and early evolution of seed plants
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PORCUPINE regulates development in response to temperature through alternative splicing
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Post-transcriptional splicing of nascent RNA contributes to widespread intron retention in plants
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One thousand plant transcriptomes and the phylogenomics of green plants
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Genetics of alternative splicing evolution during sunflower domestication
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Phylogenomic and ecological analyses reveal the spatiotemporal evolution of global pines
inferredcites →https://doi.org/10.1073/pnas.2026330118openalex-snapshot
Predicting transcriptional responses to cold stress across plant species
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CodAn: predictive models for precise identification of coding regions in eukaryotic transcripts
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InterProScan 5: genome-scale protein function classification
inferredcites →https://doi.org/10.1093/jxb/erae033openalex-snapshot
Multiomics analyses reveal the central role of the nucleolus and its machinery during heat stress acclimation in Pinus radiata
inferredcites →https://doi.org/10.1093/jxb/erx198openalex-snapshot
System-wide analysis of short-term response to high temperature in Pinus radiata
inferredcites →https://doi.org/10.1093/jxb/ery062openalex-snapshot
Thermopriming triggers splicing memory in Arabidopsis
inferredcites →https://doi.org/10.1093/jxb/erz524openalex-snapshot
Integrative analysis of the nuclear proteome in Pinus radiata reveals thermopriming coupled to epigenetic regulation
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UniProt: the universal protein knowledgebase in 2021
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The Gene Ontology resource: enriching a GOld mine
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Comprehensive database and evolutionary dynamics of U12-type introns
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Influenza virus infection induces widespread alterations of host cell splicing
inferredcites →https://doi.org/10.1101/2022.07.08.499117openalex-snapshot
Multiomics analyses reveal the central role of nucleolus and nucleoid machinery during heat stress acclimation in Pinus radiata
inferredcites →https://doi.org/10.1101/250696openalex-snapshot
Seiðr: Efficient Calculation of Robust Ensemble Gene Networks
inferredcites →https://doi.org/10.1104/pp.110.157370openalex-snapshot
Functional Analysis of the Arabidopsis PAL Gene Family in Plant Growth, Development, and Response to Environmental Stress
inferredcites →https://doi.org/10.1104/pp.114.248708openalex-snapshot
Insights into Conifer Giga-Genomes
inferredcites →https://doi.org/10.1105/tpc.113.117523openalex-snapshot
Complexity of the Alternative Splicing Landscape in Plants
inferredcites →https://doi.org/10.1105/tpc.114.135939openalex-snapshot
The Endosomal Protein CHARGED MULTIVESICULAR BODY PROTEIN1 Regulates the Autophagic Turnover of Plastids in Arabidopsis
inferredcites →https://doi.org/10.1105/tpc.18.00177openalex-snapshot
Rapid and Dynamic Alternative Splicing Impacts the Arabidopsis Cold Response Transcriptome
inferredcites →https://doi.org/10.1105/tpc.19.00344openalex-snapshot
Questionomics: Using Big Data to Ask and Answer Big Questions
inferredcites →https://doi.org/10.1111/eva.12839openalex-snapshot
Functional and morphological evolution in gymnosperms: A portrait of implicated gene families
inferredcites →https://doi.org/10.1111/pbi.12659openalex-snapshot
The heat‐shock protein/chaperone network and multiple stress resistance
inferredcites →https://doi.org/10.1111/pce.14238openalex-snapshot
Nucleus and chloroplast: A necessary understanding to overcome heat stress in Pinus radiata
inferredcites →https://doi.org/10.1111/tpj.12546openalex-snapshot
A universal protocol for the combined isolation of metabolites, DNA , long RNA s, small RNA s, and proteins from plants and microorganisms
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inferredcites →https://doi.org/10.1186/1471-2105-13-s6-s5openalex-snapshot
KIS SPLICE: de-novo calling alternative splicing events from RNA-seq data
inferredcites →https://doi.org/10.1186/s13059-014-0550-8openalex-snapshot
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
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inferredcites →https://doi.org/10.15252/msb.20178124openalex-snapshot
Multi‐Omics Factor Analysis—a framework for unsupervised integration of multi‐omics data sets
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Single-Molecule Long-Read Sequencing Reveals the Diversity of Full-Length Transcripts in Leaves of Gnetum (Gnetales)
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.2139/ssrn.4837256openalex-extracted
Physiological and Molecular Response to Drought in Somatic Plants from Pinus Radiata Embryonal Masses Induced at High Temperatures
inferred← citeshttps://doi.org/10.1007/978-981-95-5183-5_2openalex-snapshot
RNA Sequencing Platforms and Bioinformatics Tools
inferred← citeshttps://doi.org/10.1007/s00122-025-05010-xopenalex-snapshot
Climate change and plant genomic plasticity
inferred← citeshttps://doi.org/10.1007/s11103-024-01528-8openalex-snapshot
Hydrogen peroxide priming triggers splicing memory in grape berries
inferred← citeshttps://doi.org/10.1007/s13280-024-02008-5openalex-snapshot
While clearing the forests: The social–ecological memory of trees in the Anthropocene
inferred← citeshttps://doi.org/10.1016/j.envexpbot.2024.105828openalex-snapshot
An analysis of natural variation in Pinus pinaster through the lens of systems biology
inferred← citeshttps://doi.org/10.1016/j.indcrop.2025.121826openalex-snapshot
JA regulates the impact of combined heat stress and drought stress on the GA-mediated response of Pinus yunnanensis
inferred← citeshttps://doi.org/10.1016/j.pbi.2024.102590openalex-snapshot
Mechanisms of heat stress-induced transcriptional memory
inferred← citeshttps://doi.org/10.1016/j.plantsci.2024.112056openalex-snapshot
Transcription and splicing variations of SR genes accompany with genome-wide accumulation of long-introns in pine
inferred← citeshttps://doi.org/10.1016/j.plaphy.2025.109886openalex-snapshot
Physiological and molecular response to drought in somatic plants from Pinus radiata embryonal masses induced at high temperatures
inferred← citeshttps://doi.org/10.1016/j.stress.2025.100796openalex-snapshot
Functional analyses revealed Pinus radiata CHLOROPLAST SENSOR KINASE as a key component in UV-B stress and development
inferred← citeshttps://doi.org/10.1016/j.tibs.2026.07.014openalex-snapshot
The expanding functional landscape of alternative splicing in plants
inferred← citeshttps://doi.org/10.1016/j.tig.2026.01.006openalex-snapshot
Alternative splicing and climate-resilient crops
inferred← citeshttps://doi.org/10.1016/j.tplants.2026.04.001openalex-snapshot
Alternative splicing in plants: emerging order from chaos
inferred← citeshttps://doi.org/10.1093/jxb/erae033openalex-snapshot
Multiomics analyses reveal the central role of the nucleolus and its machinery during heat stress acclimation in Pinus radiata
inferred← citeshttps://doi.org/10.1093/plphys/kiae051openalex-snapshot
Epigenetic stress memory in gymnosperms
inferred← citeshttps://doi.org/10.1101/2024.01.29.577781openalex-snapshot
An analysis of natural variation in Pinus pinaster through the lens of systems biology
inferred← citeshttps://doi.org/10.1111/pce.14836openalex-snapshot
Like mother like son: Transgenerational memory and cross‐tolerance from drought to heat stress are identified in chloroplast proteome and seed provisioning in Pinus radiata
inferred← citeshttps://doi.org/10.3389/fmolb.2023.1122201openalex-snapshot
Co-expression network of heat-response transcripts: A glimpse into how splicing factors impact rice basal thermotolerance
inferred← citeshttps://doi.org/10.3389/fpls.2023.1130665openalex-snapshot
Proteomics research in forest trees: A 2012-2022 update
inferred← citeshttps://doi.org/10.3389/fpls.2024.1387575openalex-snapshot
The multifaceted role of RNA-based regulation in plant stress memory
inferred← citeshttps://doi.org/10.3390/ijms25168976openalex-snapshot
Establishment and Maintenance of Heat-Stress Memory in Plants
inferred← citeshttps://doi.org/10.3390/plants12030511openalex-snapshot
The Integration of Data from Different Long-Read Sequencing Platforms Enhances Proteoform Characterization in Arabidopsis
inferred← citeshttps://doi.org/10.3390/plants14132021openalex-snapshot
Molecular Mechanisms of Plant Stress Memory: Roles of Non-Coding RNAs and Alternative Splicing
inferred← citeshttps://doi.org/10.5565/rev/brumal.968openalex-snapshot
Morir en árbol para matar al monstruo. Lo fantástico como resistencia a la violencia y el androcentrismo en La vegetariana de Han Kang.
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