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The Physcomitrella Genome Reveals Evolutionary Insights into the Conquest of Land by Plants
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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Gene Duplication and Gene Conversion in the Caenorhabditis elegans Genome
inferredcites →https://doi.org/10.1007/s00335-006-0107-6openalex-snapshot
Loss of Chd7 function in gene-trapped reporter mice is embryonic lethal and associated with severe defects in multiple developing tissues
inferredcites →https://doi.org/10.1007/s00425-004-1351-1openalex-snapshot
Physcomitrella patens is highly tolerant against drought, salt and osmotic stress
inferredcites →https://doi.org/10.1007/s11103-006-0016-9openalex-snapshot
CENTRIN2 Interacts with the Arabidopsis Homolog of the Human XPC Protein (AtRAD4) and Contributes to Efficient Synthesis-dependent Repair of Bulky DNA Lesions
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Physcomitrella patens: mosses enter the genomic age
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Electron microscopy reconstructions of DNA repair complexes
inferredcites →https://doi.org/10.1016/j.tplants.2004.03.006openalex-snapshot
Role of plant heat-shock proteins and molecular chaperones in the abiotic stress response
inferredcites →https://doi.org/10.1038/37918openalex-snapshot
The origin and early evolution of plants on land
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The map-based sequence of the rice genome
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The Mg-chelatase H subunit is an abscisic acid receptor
inferredcites →https://doi.org/10.1038/nrm2008openalex-snapshot
Mechanism of homologous recombination: mediators and helicases take on regulatory functions
inferredcites →https://doi.org/10.1038/nsmb1261openalex-snapshot
Role of Dnl4–Lif1 in nonhomologous end-joining repair complex assembly and suppression of homologous recombination
inferredcites →https://doi.org/10.1073/pnas.032668199openalex-snapshot
The organization of Physcomitrella patens RAD51 genes is unique among eukaryotic organisms
inferredcites →https://doi.org/10.1073/pnas.0605618103openalex-snapshot
Analysis of retrotransposon structural diversity uncovers properties and propensities in angiosperm genome evolution
inferredcites →https://doi.org/10.1073/pnas.151269298openalex-snapshot
Rolling-circle transposons in eukaryotes
inferredcites →https://doi.org/10.1086/509079openalex-snapshot
The Ancestral Developmental Tool Kit of Land Plants
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Phenotypic plasticity and the changing environment
inferredcites →https://doi.org/10.1093/nar/gkl832openalex-snapshot
The mechanism of gene targeting in Physcomitrella patens: homologous recombination, concatenation and multiple integration
inferredcites →https://doi.org/10.1104/pp.107.095760openalex-snapshot
PlanTAPDB, a Phylogeny-Based Resource of Plant Transcription-Associated Proteins
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Characterization of Maize Elongation Factor 1A and Its Relationship to Protein Quality in the Endosperm
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A Porphyrin Pathway Impairment Is Responsible for the Phenotype of a Dominant Disease Lesion Mimic Mutant of Maize
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Identification of Important Regions for Ethylene Binding and Signaling in the Transmembrane Domain of the ETR1 Ethylene Receptor of Arabidopsis
inferredcites →https://doi.org/10.1105/tpc.4.10.1251openalex-snapshot
Isolation of the Arabidopsis ABI3 Gene by Positional Cloning
inferredcites →https://doi.org/10.1111/j.1365-313x.2005.02603.xopenalex-snapshot
A dehydrin gene in Physcomitrella patens is required for salt and osmotic stress tolerance
inferredcites →https://doi.org/10.1111/j.1365-313x.2006.02764.xopenalex-snapshot
Characterization and functional analysis of ABSCISIC ACID INSENSITIVE3‐like genes from Physcomitrella patens
inferredcites →https://doi.org/10.1111/j.1469-8137.2007.02187.xopenalex-snapshot
Microarray analysis of transcriptional responses to abscisic acid and osmotic, salt, and drought stress in the moss, Physcomitrella patens
inferredcites →https://doi.org/10.1126/science.1128691openalex-snapshot
The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)
inferredcites →https://doi.org/10.1126/science.290.5494.1151openalex-snapshot
The Evolutionary Fate and Consequences of Duplicate Genes
inferredcites →https://doi.org/10.1146/annurev.genet.39.073003.113340openalex-snapshot
Nonhomologous End Joining in Yeast
inferredcites →https://doi.org/10.1186/1471-2148-7-130openalex-snapshot
An ancient genome duplication contributed to the abundance of metabolic genes in the moss Physcomitrella patens
inferredcites →https://doi.org/10.1186/1741-7007-3-15openalex-snapshot
A mutation in the centriole-associated protein centrin causes genomic instability via increased chromosome loss in Chlamydomonas reinhardtii
inferredcites →https://doi.org/10.1371/journal.pcbi.0020115openalex-snapshot
Striking Similarities in the Genomic Distribution of Tandemly Arrayed Genes in Arabidopsis and Rice
inferredcites →https://doi.org/10.2307/2656792openalex-snapshot
Auxin metabolism in mosses and liverworts
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
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Physcomitrium allardiae N. Wilding & Ah-Peng, Sp. Nov. (Funariaceae), A New Species with Immersed, Cleistocarpic Capsules From Tanzania
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Hormonal Regulation of Development by Auxin and Cytokinin in Moss
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The Role of Abscisic Acid in Stress Tolerance
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The Genetic Basis of Natural Variation in Bryophyte Model Systems
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Carbon and Energy Metabolism
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Moss as a Model System for Plant Stress Responses
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Gene Targeting as a Precise Tool for Plant Mutagenesis
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Plant Adaptation to Abiotic and Genotoxic Stress: Relevance to Climate Change and Evolution
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Vergleichende Genomik: Wie aus Algen Landpflanzen wurden
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The knock‐out of ARP3a gene affects F‐actin cytoskeleton organization altering cellular tip growth, morphology and development in moss Physcomitrella patens
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The Microtubule Cytoskeleton in Bryophytes
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Lipidomic analysis of moss species Bryum pseudotriquetrum and Physcomitrium patens under cold stress
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Origin and evolution of a gibberellin‐deactivating enzyme GAMT
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Conserved redox‐dependent DNA binding of ROXY glutaredoxins with TGA transcription factors
inferred← citeshttps://doi.org/10.1002/pld3.46openalex-snapshot
Identification of an arabinopyranosyltransferase from Physcomitrella patens involved in the synthesis of the hemicellulose xyloglucan
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Plant Promoter Database (PPDB)
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CRISPR/Cas9-Mediated Knockout of Physcomitrella patens Phytochromes
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Homologous Recombination in Plants: An Antireview
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Brown Algae as a Model for Plant Organogenesis
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Phloem and Xylem Differentiation
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Physcomitrella patens Small RNA Pathways
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inferred← citeshttps://doi.org/10.1007/978-3-7091-1160-4_19openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/978-90-481-2863-1_6openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/978-90-481-3112-9_3openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/978-94-007-1533-2_11openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/978-94-007-1579-0_14openalex-snapshot
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Gene Site-Specific Insertion in Plants
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Functional Annotation of Plant Genomes
inferred← citeshttps://doi.org/10.1007/978-94-007-6988-5_11openalex-snapshot
Genetics and Genomics of Moss Models: Physiology Enters the Twenty-first Century
inferred← citeshttps://doi.org/10.1007/978-94-007-6988-5_18openalex-snapshot
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Lipid Composition of Physcomitrella patens
inferred← citeshttps://doi.org/10.1007/978-94-017-9484-8_7openalex-snapshot
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Advancements in High-Throughput Omics-Technologies for Understanding the Biology of Neglected and Underutilized Crops
inferred← citeshttps://doi.org/10.1007/978-981-16-7262-0_10openalex-snapshot
Molecular Farming: Sustainable Manufacturing of Vaccines, Antibodies, and Other Therapeutic Substances
inferred← citeshttps://doi.org/10.1007/s00018-008-8333-6openalex-snapshot
Light-harvesting complexes of vascular plants
inferred← citeshttps://doi.org/10.1007/s00018-010-0405-8openalex-snapshot
Alkyltransferase-like proteins: molecular switches between DNA repair pathways
inferred← citeshttps://doi.org/10.1007/s00018-010-0445-0openalex-snapshot
Genome-wide analysis of plant metal transporters, with an emphasis on poplar
inferred← citeshttps://doi.org/10.1007/s00018-010-0538-9openalex-snapshot
When you can’t trust the DNA: RNA editing changes transcript sequences
inferred← citeshttps://doi.org/10.1007/s00018-016-2248-4openalex-snapshot
Starch phosphorylation: insights and perspectives
inferred← citeshttps://doi.org/10.1007/s00018-018-2793-0openalex-snapshot
Ion and metabolite transport in the chloroplast of algae: lessons from land plants
inferred← citeshttps://doi.org/10.1007/s00018-021-03913-8openalex-snapshot
Systems biology of resurrection plants
inferred← citeshttps://doi.org/10.1007/s00239-010-9378-3openalex-snapshot
Evolution of the Cinnamyl/Sinapyl Alcohol Dehydrogenase (CAD/SAD) Gene Family: The Emergence of Real Lignin is Associated with the Origin of Bona Fide CAD
inferred← citeshttps://doi.org/10.1007/s00239-010-9416-1openalex-snapshot
Amino Acid Compositional Shifts During Streptophyte Transitions to Terrestrial Habitats
inferred← citeshttps://doi.org/10.1007/s00239-013-9579-7openalex-snapshot
Evolution of Plant Mitochondrial Intron-Encoded Maturases: Frequent Lineage-Specific Loss and Recurrent Intracellular Transfer to the Nucleus
inferred← citeshttps://doi.org/10.1007/s00239-018-9863-7openalex-snapshot
Identification and Analysis of OVATE Family Members from Genome of the Early Land Plants Provide Insights into Evolutionary History of OFP Family and Function
inferred← citeshttps://doi.org/10.1007/s00239-019-09900-9openalex-snapshot
Stress Adapted Mollusca and Nematoda Exhibit Convergently Expanded Hsp70 and AIG1 Gene Families
inferred← citeshttps://doi.org/10.1007/s00239-025-10260-wopenalex-snapshot
Heavy Metal-Associated Proteins in Plants: Genome-Wide Identification and Functional Insights from Angiosperms and Ancestral Plants
inferred← citeshttps://doi.org/10.1007/s00294-013-0405-yopenalex-snapshot
A third mitochondrial RNA polymerase in the moss Physcomitrella patens
inferred← citeshttps://doi.org/10.1007/s00299-010-0935-4openalex-snapshot
Simultaneous isolation of pure and intact chloroplasts and mitochondria from moss as the basis for sub-cellular proteomics
inferred← citeshttps://doi.org/10.1007/s00299-011-1152-5openalex-snapshot
Glycoprotein production in moss bioreactors
inferred← citeshttps://doi.org/10.1007/s00299-011-1177-9openalex-snapshot
Metabolite profiling of the moss Physcomitrella patens reveals evolutionary conservation of osmoprotective substances
inferred← citeshttps://doi.org/10.1007/s00299-012-1236-xopenalex-snapshot
Molecular characterization of a Cyrtochilum loxense Somatic Embryogenesis Receptor-like Kinase (SERK) gene expressed during somatic embryogenesis
inferred← citeshttps://doi.org/10.1007/s00299-013-1411-8openalex-snapshot
A parsimonious model of lineage-specific expansion of MADS-box genes in Physcomitrella patens
inferred← citeshttps://doi.org/10.1007/s00299-013-1525-zopenalex-snapshot
High contents of very long-chain polyunsaturated fatty acids in different moss species
inferred← citeshttps://doi.org/10.1007/s00299-014-1622-7openalex-snapshot
Genome-wide identification, characterization and expression analysis of the auxin response factor gene family in Vitis vinifera
inferred← citeshttps://doi.org/10.1007/s00299-015-1898-2openalex-snapshot
Ancestral and more recently acquired syntenic relationships of MADS-box genes uncovered by the Physcomitrella patens pseudochromosomal genome assembly
inferred← citeshttps://doi.org/10.1007/s00299-015-1923-5openalex-snapshot
Functional investigation of two 1-aminocyclopropane-1-carboxylate (ACC) synthase-like genes in the moss Physcomitrella patens
inferred← citeshttps://doi.org/10.1007/s00299-018-2293-6openalex-snapshot
Physcomitrella patens, a versatile synthetic biology chassis
inferred← citeshttps://doi.org/10.1007/s00299-021-02794-2openalex-snapshot
Autopolyploidization affects transcript patterns and gene targeting frequencies in Physcomitrella
inferred← citeshttps://doi.org/10.1007/s00299-023-03016-7openalex-snapshot
The putative myristoylome of Physcomitrium patens reveals conserved features of myristoylation in basal land plants
inferred← citeshttps://doi.org/10.1007/s00299-024-03143-9openalex-snapshot
Development of PEG-mediated genetic transformation and gene editing system of Bryum argenteum as an abiotic stress tolerance model plant
inferred← citeshttps://doi.org/10.1007/s00299-024-03286-9openalex-snapshot
OPDA/dn-OPDA actions: biosynthesis, metabolism, and signaling
inferred← citeshttps://doi.org/10.1007/s00299-024-03329-1openalex-snapshot
A snapshot of the Physcomitrella N-terminome reveals N-terminal methylation of organellar proteins
inferred← citeshttps://doi.org/10.1007/s00344-008-9053-8openalex-snapshot
Evidence for Importance of tRNA-Dependent Cytokinin Biosynthetic Pathway in the Moss Physcomitrella patens
inferred← citeshttps://doi.org/10.1007/s00344-019-09945-6openalex-snapshot
Evidence for the Early Evolutionary Loss of the M20D Auxin Amidohydrolase Family from Mosses and Horizontal Gene Transfer from Soil Bacteria of Cryptic Hydrolase Orthologues to Physcomitrella patens
inferred← citeshttps://doi.org/10.1007/s00344-023-10986-1openalex-snapshot
Bryophytes as Modern Model Plants: An Overview of Their Development, Contributions, and Future Prospects
inferred← citeshttps://doi.org/10.1007/s00344-025-11622-wopenalex-snapshot
Functional Diversification and Mechanistic Insights of MYB Transcription Factors in Mediating Plant Growth and Development, Secondary Metabolism, and Stress Responses
inferred← citeshttps://doi.org/10.1007/s00412-009-0237-1openalex-snapshot
Histone3 variants in plants
inferred← citeshttps://doi.org/10.1007/s00425-008-0727-zopenalex-snapshot
Proteomic analysis of the response to high-salinity stress in Physcomitrella patens
inferred← citeshttps://doi.org/10.1007/s00425-008-0869-zopenalex-snapshot
Contribution of plastocyanin isoforms to photosynthesis and copper homeostasis in Arabidopsis thaliana grown at different copper regimes
inferred← citeshttps://doi.org/10.1007/s00425-009-0929-zopenalex-snapshot
Genome-wide identification of BURP domain-containing genes in rice reveals a gene family with diverse structures and responses to abiotic stresses
inferred← citeshttps://doi.org/10.1007/s00425-009-0969-4openalex-snapshot
Pythium infection activates conserved plant defense responses in mosses
inferred← citeshttps://doi.org/10.1007/s00425-010-1190-1openalex-snapshot
Regulation of sulfate assimilation in Physcomitrella patens: mosses are different!
inferred← citeshttps://doi.org/10.1007/s00425-011-1575-9openalex-snapshot
Evolution and functional diversification of the small heat shock protein/α-crystallin family in higher plants
inferred← citeshttps://doi.org/10.1007/s00425-011-1579-5openalex-snapshot
A CELLULOSE SYNTHASE (CESA) gene essential for gametophore morphogenesis in the moss Physcomitrella patens
inferred← citeshttps://doi.org/10.1007/s00425-012-1735-6openalex-snapshot
CHUP1 mediates actin-based light-induced chloroplast avoidance movement in the moss Physcomitrella patens
inferred← citeshttps://doi.org/10.1007/s00425-012-1742-7openalex-snapshot
ARABIDILLO gene homologues in basal land plants: species-specific gene duplication and likely functional redundancy
inferred← citeshttps://doi.org/10.1007/s00425-012-1749-0openalex-snapshot
Aldehyde dehydrogenase (ALDH) superfamily in plants: gene nomenclature and comparative genomics
inferred← citeshttps://doi.org/10.1007/s00425-012-1754-3openalex-snapshot
Evolution of GOLDEN2-LIKE gene function in C3 and C4 plants
inferred← citeshttps://doi.org/10.1007/s00425-012-1803-yopenalex-snapshot
Ferredoxin:thioredoxin reductase (FTR) links the regulation of oxygenic photosynthesis to deeply rooted bacteria
inferred← citeshttps://doi.org/10.1007/s00425-013-2000-3openalex-snapshot
Photoheterotrophic growth of Physcomitrella patens
inferred← citeshttps://doi.org/10.1007/s00425-014-2068-4openalex-snapshot
Blue-light irradiation up-regulates the ent-kaurene synthase gene and affects the avoidance response of protonemal growth in Physcomitrella patens
inferred← citeshttps://doi.org/10.1007/s00425-015-2451-9openalex-snapshot
The evolutionary landscape of PRC1 core components in green lineage
inferred← citeshttps://doi.org/10.1007/s00425-016-2596-1openalex-snapshot
Different dehydrins perform separate functions in Physcomitrella patens
inferred← citeshttps://doi.org/10.1007/s00425-018-2934-6openalex-snapshot
Evolutionarily conserved function of the sacred lotus (Nelumbo nucifera Gaertn.) CER2-LIKE family in very-long-chain fatty acid elongation
inferred← citeshttps://doi.org/10.1007/s00425-019-03173-8openalex-snapshot
Functional characterization of metallothionein-like genes from Physcomitrella patens: expression profiling, yeast heterologous expression, and disruption of PpMT1.2a gene
inferred← citeshttps://doi.org/10.1007/s00425-020-03354-wopenalex-snapshot
Evolutionary insights into FYVE and PHOX effector proteins from the moss Physcomitrella patens
inferred← citeshttps://doi.org/10.1007/s00425-020-03424-zopenalex-snapshot
The identification of differentially expressed genes in male and female gametophytes of simple thalloid liverwort Pellia endiviifolia sp. B using an RNA-seq approach
inferred← citeshttps://doi.org/10.1007/s00425-020-03429-8openalex-snapshot
Functional redundancy and divergence of β-carbonic anhydrases in Physcomitrella patens
inferred← citeshttps://doi.org/10.1007/s00425-020-03501-3openalex-snapshot
Light- and hormone-mediated development in non-flowering plants: An overview
inferred← citeshttps://doi.org/10.1007/s00425-026-04939-7openalex-snapshot
Identification and intracellular functional characterization of myosin XI and VIII in the lycophyte Selaginella moellendorffii
inferred← citeshttps://doi.org/10.1007/s00438-009-0424-zopenalex-snapshot
RNA editing: only eleven sites are present in the Physcomitrella patens mitochondrial transcriptome and a universal nomenclature proposal
inferred← citeshttps://doi.org/10.1007/s00438-009-0433-yopenalex-snapshot
Patterns of tandem repetition in plant whole genome assemblies
inferred← citeshttps://doi.org/10.1007/s00438-010-0524-9openalex-snapshot
RNase T2 genes from rice and the evolution of secretory ribonucleases in plants
inferred← citeshttps://doi.org/10.1007/s00438-015-1107-6openalex-snapshot
Transcriptome-wide identification of Camellia sinensis WRKY transcription factors in response to temperature stress
inferred← citeshttps://doi.org/10.1007/s00438-023-02041-1openalex-snapshot
Genome-wide analysis of the GDSL esterase/lipase family genes in Physcomitrium patens and the involvement of GELP31 in spore germination
inferred← citeshttps://doi.org/10.1007/s00468-014-1070-6openalex-snapshot
Ecophysiological implications of vascular differentiation and plant evolution
inferred← citeshttps://doi.org/10.1007/s00497-021-00410-7openalex-snapshot
The evolution of imprinting in plants: beyond the seed
inferred← citeshttps://doi.org/10.1007/s00497-021-00416-1openalex-snapshot
Evolution and diversity of the angiosperm anther: trends in function and development
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