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Navigating the Folding Routes
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/bip.360350114openalex-snapshot
Nucleation mechanism for protein folding and theoretical predictions for hydrogen‐exchange labeling experiments
inferredcites →https://doi.org/10.1002/prot.340210302openalex-snapshot
Funnels, pathways, and the energy landscape of protein folding: A synthesis
inferredcites →https://doi.org/10.1021/bi00188a023openalex-snapshot
Kinetic Mechanism of Cytochrome c Folding: Involvement of the Heme and Its Ligands
inferredcites →https://doi.org/10.1063/1.462462openalex-snapshot
Folding kinetics of proteins and copolymers
inferredcites →https://doi.org/10.1073/pnas.87.9.3526openalex-snapshot
Metastability of the folded states of globular proteins.
inferredcites →https://doi.org/10.1073/pnas.89.11.4918openalex-snapshot
Optimal protein-folding codes from spin-glass theory.
inferredcites →https://doi.org/10.1073/pnas.90.13.6369openalex-snapshot
Kinetics and thermodynamics of folding in model proteins.
inferredcites →https://doi.org/10.1073/pnas.90.24.11860openalex-snapshot
Fast events in protein folding initiated by nanosecond laser photolysis.
inferredcites →https://doi.org/10.1073/pnas.91.22.10422openalex-snapshot
Structure of the transition state for the folding/unfolding of the barley chymotrypsin inhibitor 2 and its implications for mechanisms of protein folding.
inferredcites →https://doi.org/10.1073/pnas.92.8.3626openalex-snapshot
Toward an outline of the topography of a realistic protein-folding funnel.
inferredcites →https://doi.org/10.1146/annurev.bb.23.060194.001443openalex-snapshot
High-Pressure NMR Spectroscopy of Proteins and Membranes
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
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Future directions in folding: The multi-state nature of protein structure
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Factors governing the foldability of proteins
inferred← citeshttps://doi.org/10.1002/(sici)1097-0134(199702)27:2<171::aid-prot3>3.0.co;2-jopenalex-snapshot
Predicting the equilibrium protein folding pathway: Structure-based analysis of staphylococcal nuclease
inferred← citeshttps://doi.org/10.1002/(sici)1097-0134(19980101)30:1<2::aid-prot2>3.0.co;2-ropenalex-snapshot
Protein folding in the landscape perspective: Chevron plots and non-arrhenius kinetics
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Two structural subdomains of barstar detected by rapid mixing NMR measurement of amide hydrogen exchange
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Extracting contact energies from protein structures: A study using a simplified model
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Testing a new Monte Carlo algorithm for protein folding
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Folding Lennard-Jones proteins by a contact potential
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Extensive molecular dynamics simulations of a β-hairpin-forming peptide
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Thermodynamics of protein folding: A statistical mechanical study of a small all-β protein
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A parameterization of RNA sequence space
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Conformational Search: Proteins
inferred← citeshttps://doi.org/10.1002/0470845015.cpa027openalex-snapshot
Protein Folding and Optimization Algorithms
inferred← citeshttps://doi.org/10.1002/1097-0134(20000901)40:4<543::aid-prot20>3.0.co;2-oopenalex-snapshot
Modeling protein density of states: Additive hydrophobic effects are insufficient for calorimetric two-state cooperativity
inferred← citeshttps://doi.org/10.1002/1097-0134(20000901)40:4<637::aid-prot80>3.0.co;2-4openalex-snapshot
Polymer principles of protein calorimetric two-state cooperativity
inferred← citeshttps://doi.org/10.1002/1097-0134(20000901)40:4<637::aid-prot80>3.3.co;2-wopenalex-snapshot
Polymer principles of protein calorimetric two‐state cooperativity
inferred← citeshttps://doi.org/10.1002/1097-0134(20001115)41:3<288::aid-prot20>3.0.co;2-copenalex-snapshot
Mechanism of protein folding
inferred← citeshttps://doi.org/10.1002/1097-0134(20010215)42:3<345::aid-prot50>3.0.co;2-hopenalex-snapshot
Exploring the energy landscape of a ? hairpin in explicit solvent
inferred← citeshttps://doi.org/10.1002/1097-0134(20010215)42:3<422::aid-prot120>3.0.co;2-2openalex-snapshot
Learning effective amino acid interactions through iterative stochastic techniques
inferred← citeshttps://doi.org/10.1002/1097-0134(20010301)42:4<433::aid-prot10>3.0.co;2-sopenalex-snapshot
Computational approach to the protein-folding problem
inferred← citeshttps://doi.org/10.1002/1097-0282(200101)58:1<46::aid-bip50>3.0.co;2-qopenalex-snapshot
Effective protein folding in simple random search
inferred← citeshttps://doi.org/10.1002/1521-3757(20011119)113:22<4378::aid-ange4378>3.0.co;2-gopenalex-snapshot
Millisecond Time Resolved Photo-CIDNP NMR Reveals a Non-Native Folding Intermediate on the Ion-Induced Refolding Pathway of Bovineα-Lactalbumin
inferred← citeshttps://doi.org/10.1002/1521-3773(20011119)40:22<4248::aid-anie4248>3.0.co;2-iopenalex-snapshot
Millisecond Time Resolved Photo-CIDNP NMR Reveals a Non-Native Folding Intermediate on the Ion-Induced Refolding Pathway of Bovine α-Lactalbumin
inferred← citeshttps://doi.org/10.1002/1522-2683(200107)22:12<2359::aid-elps2359>3.0.co;2-8openalex-snapshot
Folding/unfolding/refolding of proteins: Present methodologies in comparison with capillary zone electrophoresis
inferred← citeshttps://doi.org/10.1002/1522-2683(200109)22:17<3728::aid-elps3728>3.0.co;2-oopenalex-snapshot
Monitoring folding/unfolding transitions of proteins by capillary zone electrophoresis: Measurement ofG and its variation along the pH scale
inferred← citeshttps://doi.org/10.1002/3527600906.mcb.200300050openalex-snapshot
Food Proteins: Interactions and Functionality
inferred← citeshttps://doi.org/10.1002/3527600906.mcb.200300085openalex-snapshot
Aggregation, Protein
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Simulated Annealing—Optimal Histogram Methods
inferred← citeshttps://doi.org/10.1002/9780470141649.ch9openalex-snapshot
Macrostate Dissection of Thermodynamic Monte Carlo Integrals
inferred← citeshttps://doi.org/10.1002/9780470141748.ch1openalex-snapshot
Energy Landscapes: From Clusters to Biomolecules
inferred← citeshttps://doi.org/10.1002/9780470939932.ch13openalex-snapshot
Refolding of Inclusion Body Proteins fromE. coli
inferred← citeshttps://doi.org/10.1002/9781119162254.ch02openalex-snapshot
Scoring Functions for Predicting Structure and Binding of Proteins
inferred← citeshttps://doi.org/10.1002/9783527612949.ch06openalex-snapshot
Protein Folding and Beyond
inferred← citeshttps://doi.org/10.1002/9783527619498.ch12bopenalex-snapshot
Characterization of Protein Folding Barriers with Rate Equilibrium Free Energy Relationships
inferred← citeshttps://doi.org/10.1002/9783527626137.ch13openalex-snapshot
Force‐clamp Spectroscopy of Single Proteins
inferred← citeshttps://doi.org/10.1002/9783527654185.ch9openalex-snapshot
Sequence‐Based Prediction of Protein Behavior
inferred← citeshttps://doi.org/10.1002/adts.201800175openalex-snapshot
Energy Landscapes for Proteins: From Single Funnels to Multifunctional Systems
inferred← citeshttps://doi.org/10.1002/advs.76023openalex-snapshot
AI‐Physics‐Experiment Trinity for Integrated Protein Dynamics Modeling
inferred← citeshttps://doi.org/10.1002/ange.200802644openalex-snapshot
Kohärente mehrdimensionale Schwingungsspektroskopie von Biomolekülen: Konzepte, Simulationen und Herausforderungen
inferred← citeshttps://doi.org/10.1002/ange.201308512openalex-snapshot
An Off‐Pathway Folding Intermediate of an Acyl Carrier Protein Domain Coexists with the Folded and Unfolded States under Native Conditions
inferred← citeshttps://doi.org/10.1002/anie.200802644openalex-snapshot
Coherent Multidimensional Vibrational Spectroscopy of Biomolecules: Concepts, Simulations, and Challenges
inferred← citeshttps://doi.org/10.1002/anie.201308512openalex-snapshot
An Off‐Pathway Folding Intermediate of an Acyl Carrier Protein Domain Coexists with the Folded and Unfolded States under Native Conditions
inferred← citeshttps://doi.org/10.1002/app.32786openalex-snapshot
Synthesis and comparative solution properties of a cationic polyelectrolyte and its corresponding polyzwitterion from 1,1‐diallyl‐4‐methoxycarbonylpiperidinium chloride
inferred← citeshttps://doi.org/10.1002/bip.20388openalex-snapshot
Removal of kinetic traps and enhanced protein folding by strategic substitution of amino acids in a model α‐helical hairpin peptide
inferred← citeshttps://doi.org/10.1002/bip.20866openalex-snapshot
Structural insights into cold inactivation of tryptophanase and cold adaptation of subtilisin S41
inferred← citeshttps://doi.org/10.1002/chem.201000619openalex-snapshot
A Self‐Powered and Reusable Biocomputing Security Keypad Lock System Based on Biofuel Cells
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Biofunctionalized Polymer Surfaces Exhibiting Minimal Interaction towards Immobilized Proteins
inferred← citeshttps://doi.org/10.1002/cphc.200700662openalex-snapshot
From Valleys to Ridges: Exploring the Dynamic Energy Landscape of Single Membrane Proteins
inferred← citeshttps://doi.org/10.1002/cphc.201500700openalex-snapshot
Reduction of the Search Space for the Folding of Proteins at the Level of Formation and Assembly of Secondary Structures: A New View on the Solution of Levinthal′s Paradox
inferred← citeshttps://doi.org/10.1002/cphc.201501125openalex-snapshot
Stochastic Resonance in Protein Folding Dynamics
inferred← citeshttps://doi.org/10.1002/ijch.201400012openalex-snapshot
Simulating Biomolecular Folding and Function by Native‐Structure‐Based/Go‐Type Models
inferred← citeshttps://doi.org/10.1002/ijch.201400022openalex-snapshot
Coarse‐Grained and Atomistic MD Simulations of RNA and DNA Folding
inferred← citeshttps://doi.org/10.1002/ijch.201400030openalex-snapshot
Structural Heterogeneity and Dynamics of the Unfolded Ensemble
inferred← citeshttps://doi.org/10.1002/ijch.201400074openalex-snapshot
Significance of Molecular Dynamics Simulations for Life Sciences
inferred← citeshttps://doi.org/10.1002/iub.223openalex-snapshot
Protein folding simulations: From coarse‐grained model to all‐atom model
inferred← citeshttps://doi.org/10.1002/jcc.27060openalex-snapshot
Evolutionary conservation of amino acids contributing to the protein folding transition state
inferred← citeshttps://doi.org/10.1002/jccs.200000141openalex-snapshot
Protein Folding and β‐Sheet Proteins
inferred← citeshttps://doi.org/10.1002/jccs.200400163openalex-snapshot
Modular Assembly Revealed by Tryptophan and Other Optical Probes in Staphylococcal Nuclease Folding
inferred← citeshttps://doi.org/10.1002/jccs.202400396openalex-snapshot
How simple models explain complex protein folding behaviors
inferred← citeshttps://doi.org/10.1002/mabi.200600158openalex-snapshot
Exploring Protein Structure and Dynamics under Denaturing Conditions by Single‐Molecule FRET Analysis
inferred← citeshttps://doi.org/10.1002/mats.201900036openalex-snapshot
Network Topology of the States Probed by a Glassy Polymer during Physical Aging
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Biochemie und Molekulargenetik 1995
inferred← citeshttps://doi.org/10.1002/nadc.19990470211openalex-snapshot
Biochemie und Molekulargenetik 1998
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Study of structure and scaling behavior of chemically unfolded β‐casein by means of small‐angle neutron scattering
inferred← citeshttps://doi.org/10.1002/pmic.201000241openalex-snapshot
Dual energy landscape: The functional state of the β‐barrel outer membrane protein G molds its unfolding energy landscape
inferred← citeshttps://doi.org/10.1002/pmic.201800059openalex-snapshot
Formation of Heterotypic Amyloids: α‐Synuclein in Co‐Aggregation
inferred← citeshttps://doi.org/10.1002/pola.10336openalex-snapshot
Synthesis of a new amino acid/sulfur dioxide copolymer and its use in aqueous two‐phase polymer systems
inferred← citeshttps://doi.org/10.1002/pola.10565openalex-snapshot
Synthesis and solution properties of a new pH‐responsive polymer containing amino propanesulfonic acid residues
inferred← citeshttps://doi.org/10.1002/pro.2256openalex-snapshot
Ensemble‐based characterization of unbound and bound states on protein energy landscape
inferred← citeshttps://doi.org/10.1002/pro.296openalex-snapshot
β‐strand interactions at the domain interface critical for the stability of human lens γD‐crystallin
inferred← citeshttps://doi.org/10.1002/pro.339openalex-snapshot
Amino acid interaction preferences in proteins
inferred← citeshttps://doi.org/10.1002/pro.4096openalex-snapshot
Protein folding ‐ seeing is deceiving
inferred← citeshttps://doi.org/10.1002/pro.4332openalex-snapshot
Characterization of early and late transition states of the folding pathway of a SH2 domain
inferred← citeshttps://doi.org/10.1002/pro.444openalex-snapshot
Interaction of an ionic complementary peptide with a hydrophobic graphite surface
inferred← citeshttps://doi.org/10.1002/pro.5560040921openalex-snapshot
A statistical mechanical model for hydrogen exchange in globular proteins
inferred← citeshttps://doi.org/10.1002/pro.5560051015openalex-snapshot
In vitro renaturation of bovine β‐lactoglobulin A leads to a biologically active but incompletely refolded state
inferred← citeshttps://doi.org/10.1002/pro.5560060210openalex-snapshot
A desolvation barrier to hydrophobic cluster formation may contribute to the rate‐limiting step in protein folding
inferred← citeshttps://doi.org/10.1002/pro.5560060709openalex-snapshot
Absence of a stable intermediate on the folding pathway of protein A
inferred← citeshttps://doi.org/10.1002/pro.5560060713openalex-snapshot
Temperature control for kinetic refolding of heat‐denatured ovalbumin
inferred← citeshttps://doi.org/10.1002/pro.5560060719openalex-snapshot
Mutational analysis of the BPTI folding pathway: I. Effects of aromatic → leucine substitutions on the distribution of folding intermediates
inferred← citeshttps://doi.org/10.1002/pro.5560061210openalex-snapshot
Lack of coupling between secondary structure formation and collapse in a model polypeptide that mimics early folding intermediates, the F2 fragment of the Escherichia coli tryptophan‐synthase β chain
inferred← citeshttps://doi.org/10.1002/pro.5560070415openalex-snapshot
Conformational diversity of acid‐denatured cytochrome c studied by a matrix analysis of far‐UV CD spectra
inferred← citeshttps://doi.org/10.1002/pro.619openalex-snapshot
Constraining local structure can speed up folding by promoting structural polarization of the folding pathway
inferred← citeshttps://doi.org/10.1002/prot.10185openalex-snapshot
Effects of a helix substitution on the folding mechanism of bovine α‐lactalbumin
inferred← citeshttps://doi.org/10.1002/prot.10342openalex-snapshot
Prediction of folding rates and transition‐state placement from native‐state geometry
inferred← citeshttps://doi.org/10.1002/prot.1039openalex-snapshot
Population analyses of kinetic partitioning in protein folding
inferred← citeshttps://doi.org/10.1002/prot.1049openalex-snapshot
Molecular dynamics studies on HIV‐1 protease: Drug resistance and folding pathways
inferred← citeshttps://doi.org/10.1002/prot.10563openalex-snapshot
Funnel‐like organization in sequence space determines the distributions of protein stability and folding rate preferred by evolution
inferred← citeshttps://doi.org/10.1002/prot.10583openalex-snapshot
Squeezed exponential kinetics to describe a nonglassy downhill folding as observed in a lattice protein model
inferred← citeshttps://doi.org/10.1002/prot.1107openalex-snapshot
Structured disorder and conformational selection
inferred← citeshttps://doi.org/10.1002/prot.20094openalex-snapshot
Recognition of coarse‐grained protein tertiary structure
inferred← citeshttps://doi.org/10.1002/prot.20175openalex-snapshot
Transition states for folding of circular‐permuted proteins
inferred← citeshttps://doi.org/10.1002/prot.20247openalex-snapshot
Exploring peptide energy landscapes: A test of force fields and implicit solvent models
inferred← citeshttps://doi.org/10.1002/prot.20313openalex-snapshot
Study of the Villin headpiece folding dynamics by combining coarse‐grained Monte Carlo evolution and all‐atom molecular dynamics
inferred← citeshttps://doi.org/10.1002/prot.20585openalex-snapshot
Atomically detailed potentials to recognize native and approximate protein structures
inferred← citeshttps://doi.org/10.1002/prot.20714openalex-snapshot
Computational characterization of the sequence landscape in simple protein alphabets
inferred← citeshttps://doi.org/10.1002/prot.20782openalex-snapshot
Effect of ethanol on folding of hen egg‐white lysozyme under acidic condition
inferred← citeshttps://doi.org/10.1002/prot.21069openalex-snapshot
Transition state of a SH3 domain detected with principle component analysis and a charge‐neutralized all‐atom protein model
inferred← citeshttps://doi.org/10.1002/prot.21185openalex-snapshot
Complexity of free energy landscapes of peptides revealed by nonlinear principal component analysis
inferred← citeshttps://doi.org/10.1002/prot.21317openalex-snapshot
Conformational states and folding pathways of peptides revealed by principal‐independent component analyses
inferred← citeshttps://doi.org/10.1002/prot.21345openalex-snapshot
Can molecular dynamics simulations provide high‐resolution refinement of protein structure?
inferred← citeshttps://doi.org/10.1002/prot.21830openalex-snapshot
Distant homology detection using a LEngth and STructure‐based sequence Alignment Tool (LESTAT)
inferred← citeshttps://doi.org/10.1002/prot.22099openalex-snapshot
How general is the nucleation–condensation mechanism?
inferred← citeshttps://doi.org/10.1002/prot.22626openalex-snapshot
Predicting protein complex geometries with a neural network
inferred← citeshttps://doi.org/10.1002/prot.23074openalex-snapshot
Mechanistic insight of photo‐induced aggregation of chicken egg white lysozyme: The interplay between hydrophobic interactions and formation of intermolecular disulfide bonds
inferred← citeshttps://doi.org/10.1002/prot.24309openalex-snapshot
Analyzing the effect of homogeneous frustration in protein folding
inferred← citeshttps://doi.org/10.1002/prot.24460openalex-snapshot
Molecular dynamics study of HIV‐1 RT‐DNA‐nevirapine complexes explains NNRTI inhibition and resistance by connection mutations
inferred← citeshttps://doi.org/10.1002/prot.24980openalex-snapshot
Identification of putative unfolding intermediates of the mutant His‐107‐tyr of human carbonic anhydrase II in a multidimensional property space
inferred← citeshttps://doi.org/10.1002/prot.26062openalex-snapshot
Investigating the folding mechanism of the N‐terminal domain of ribosomal protein L9
inferred← citeshttps://doi.org/10.1002/prot.26349openalex-snapshot
Multi‐layer sequential network analysis improves protein 3D structural classification
inferred← citeshttps://doi.org/10.1002/prot.26566openalex-snapshot
II . Geometrical framework for thinking about globular proteins: The power of poking
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A geometrical framework for thinking about proteins
inferred← citeshttps://doi.org/10.1002/qua.22347openalex-snapshot
Structural alignment using the generalized Euclidean distance between conformations
inferred← citeshttps://doi.org/10.1002/qua.26089openalex-snapshot
Moment expansion approach to the time dynamics of genetic evolution
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Local Conformational Signals and the Statistical Thermodynamics of Collapsed Helical Proteins
inferred← citeshttps://doi.org/10.1006/jmbi.1996.0793openalex-snapshot
Folding kinetics of Che Y mutants with enhanced native α-helix propensities 1 1Edited by A. R. Fersht
inferred← citeshttps://doi.org/10.1006/jmbi.1997.0960openalex-snapshot
Folding of the disulfide-bonded β-sheet protein tendamistat: rapid two-state folding without hydrophobic collapse 1 1Edited by A. R. Fersht
inferred← citeshttps://doi.org/10.1006/jmbi.1997.0996openalex-snapshot
Structural characterisation and comparison of the native and A-states of equine lysozyme
inferred← citeshttps://doi.org/10.1006/jmbi.1997.1284openalex-snapshot
Torsion angle dynamics for NMR structure calculation with the new program Dyana
inferred← citeshttps://doi.org/10.1006/jmbi.1998.1997openalex-snapshot
Lattice models for proteins reveal multiple folding nuclei for nucleation-collapse mechanism 1 1Edited by A. R. Fersht
inferred← citeshttps://doi.org/10.1006/jmbi.1998.2588openalex-snapshot
The greek key protein apo-pseudoazurin folds through an obligate on-pathway intermediate 1 1Edited by A. R. Fersht
inferred← citeshttps://doi.org/10.1006/jmbi.1999.2612openalex-snapshot
Exploring structures in protein folding funnels with free energy functionals: the denatured ensemble
inferred← citeshttps://doi.org/10.1006/jmbi.1999.2613openalex-snapshot
Exploring structures in protein folding funnels with free energy functionals: the transition state ensemble
inferred← citeshttps://doi.org/10.1006/jmbi.1999.2843openalex-snapshot
Analysis methods for comparison of multiple molecular dynamics trajectories: applications to protein unfolding pathways and denatured ensembles 1 1Edited by A. R. Fersht
inferred← citeshttps://doi.org/10.1006/jmbi.1999.2924openalex-snapshot
Experimental study of the protein folding landscape: unfolding reactions in cytochrome c
inferred← citeshttps://doi.org/10.1006/jmbi.1999.3006openalex-snapshot
Protein folding: from the levinthal paradox to structure prediction
inferred← citeshttps://doi.org/10.1006/jmbi.2000.3922openalex-snapshot
A statistical appraisal of native state hydrogen exchange data: evidence for a burst phase continuum?11Edited by P. E. Wright
inferred← citeshttps://doi.org/10.1006/jmbi.2000.4314openalex-snapshot
A kinetic folding intermediate probed by native state hydrogen exchange11Edited by A. R. Fersht
inferred← citeshttps://doi.org/10.1006/jmbi.2000.4399openalex-snapshot
Apparent two-state tendamistat folding is a sequential process along a defined route11Edited by A. R. Fersht
inferred← citeshttps://doi.org/10.1006/jmbi.2001.4436openalex-snapshot
Native hydrogen bonds in a molten globule: the apoflavodoxin thermal intermediate
inferred← citeshttps://doi.org/10.1006/jmbi.2001.4804openalex-snapshot
Origin of apparent fast and non-exponential kinetics of lysozyme folding measured in pulsed hydrogen exchange experiments
inferred← citeshttps://doi.org/10.1007/0-306-48628-8_5openalex-snapshot
Hairpin Formation in Polynucleotides: A Simple Folding Problem?
inferred← citeshttps://doi.org/10.1007/0-387-25919-8_2openalex-snapshot
The Generic Nature of Protein Folding and Misfolding
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The Necessity Of Biosemiotics: Matter-Symbol Complementarity
inferred← citeshttps://doi.org/10.1007/3-540-27004-3_10openalex-snapshot
Protein Dynamics and Protein Folding Dynamics Revealed by Time-Resolved Fluorescence
inferred← citeshttps://doi.org/10.1007/978-0-387-68372-0_3openalex-snapshot
Knowledge-Based Energy Functions for Computational Studies of Proteins
inferred← citeshttps://doi.org/10.1007/978-0-387-76497-9_16openalex-snapshot
Probing Single Membrane Proteins by Atomic Force Microscopy
inferred← citeshttps://doi.org/10.1007/978-1-4020-9394-4_15openalex-snapshot
Systems-Level Analysis of Protein Quality in Inclusion Body-Forming Escherichia coli Cells
inferred← citeshttps://doi.org/10.1007/978-1-4020-9650-1_17openalex-snapshot
The Physics and Metaphysics of Biosemiotics
inferred← citeshttps://doi.org/10.1007/978-1-4419-6351-2_6openalex-snapshot
Topics in Nucleic Acids Structure: DNA Interactions and Folding
inferred← citeshttps://doi.org/10.1007/978-1-4419-6889-0_6openalex-snapshot
Statistical Contact Potentials in Protein Coarse-Grained Modeling: From Pair to Multi-body Potentials
inferred← citeshttps://doi.org/10.1007/978-1-4612-4066-2_13openalex-snapshot
Pursuing Laplace’s Vision on Modern Computers
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Global Minimization and Parameter Estimation in Computational Biology
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Picturing the Working Protein
inferred← citeshttps://doi.org/10.1007/978-1-4757-3218-4_3openalex-snapshot
Energy Landscape Projections of Molecular Potential Functions
inferred← citeshttps://doi.org/10.1007/978-1-4757-5284-7_1openalex-snapshot
Convex Global Underestimation for Molecular Structure Prediction
inferred← citeshttps://doi.org/10.1007/978-1-59745-367-7_13openalex-snapshot
Single-Molecule Fluorescence Studies of Protein Folding
inferred← citeshttps://doi.org/10.1007/978-3-030-04598-2_2openalex-snapshot
Science as a Social Self-organizing Extended Cognitive System. Coherence and Flexibility of Scientific Explanatory Patterns
inferred← citeshttps://doi.org/10.1007/978-3-030-28303-2_2openalex-snapshot
The Amino Acid Sequences of Proteins Determine Folding and Non-folding
inferred← citeshttps://doi.org/10.1007/978-3-0348-0651-0_2openalex-snapshot
Studying Protein Interior with Fractal Dimension
inferred← citeshttps://doi.org/10.1007/978-3-319-02970-2_8openalex-snapshot
Simulating Protein Folding in Different Environmental Conditions
inferred← citeshttps://doi.org/10.1007/978-3-319-23449-6_4openalex-snapshot
Managing the Adaptive Proteostatic Landscape: Restoring Resilience in Alpha-1 Antitrypsin Deficiency
inferred← citeshttps://doi.org/10.1007/978-3-319-50688-3_10openalex-snapshot
Molecular Dynamics Simulations of Biocorona Formation
inferred← citeshttps://doi.org/10.1007/978-3-319-91092-5_27openalex-snapshot
Two Views on the Protein Folding Puzzle
inferred← citeshttps://doi.org/10.1007/978-3-319-95843-9_3openalex-snapshot
Protein Dynamics Simulations Using Coarse-Grained Models
inferred← citeshttps://doi.org/10.1007/978-3-540-39668-0_6openalex-snapshot
Information Complexity and Biology
inferred← citeshttps://doi.org/10.1007/978-3-540-88787-4_13openalex-snapshot
Protein Misfolding Diseases and the Key Role Played by the Interactions of Polypeptides with Water
inferred← citeshttps://doi.org/10.1007/978-3-642-01228-0_9openalex-snapshot
Formation of the Functional Structure of Enzymes: Co- and Post-Translational Events
inferred← citeshttps://doi.org/10.1007/978-3-642-28554-7_3openalex-snapshot
Coarse-Grained Modeling of Protein Dynamics
inferred← citeshttps://doi.org/10.1007/978-3-642-28882-1_6openalex-snapshot
Self-Evolvability for Biosystems
inferred← citeshttps://doi.org/10.1007/978-3-642-33206-7_3openalex-snapshot
Rugged and Elementary Landscapes
inferred← citeshttps://doi.org/10.1007/978-3-642-59542-4_4openalex-snapshot
Strain-Dependent Fluorescence Correlation Spectroscopy: Proposing a New Measurement for Conformational Fluctuations of Biological Macromolecules
inferred← citeshttps://doi.org/10.1007/978-3-642-60854-4_49openalex-snapshot
Surveying a potential energy surface by eigenvector-following
inferred← citeshttps://doi.org/10.1007/978-3-7091-0670-9_11openalex-snapshot
Interplay Between Phase Separation and Polymer Crystallization
inferred← citeshttps://doi.org/10.1007/978-94-007-5161-3_18openalex-snapshot
The Necessity of Biosemiotics: Matter-Symbol Complementarity
inferred← citeshttps://doi.org/10.1007/978-94-007-6546-7_19openalex-snapshot
Habitability on Kepler Worlds: Are Moons Relevant?
inferred← citeshttps://doi.org/10.1007/978-981-10-4651-3_10openalex-snapshot
Evolution of Multiple Chaperonins: Innovation of Evolutionary Capacitors
inferred← citeshttps://doi.org/10.1007/978-981-15-9144-0_5openalex-snapshot
Modeling and Analysis of Large-Scale Networks
inferred← citeshttps://doi.org/10.1007/978-981-96-2088-3_12openalex-snapshot
Force Spectroscopy Tools for Probing the Mechanochemistry of Protein Folding/Unfolding
inferred← citeshttps://doi.org/10.1007/bf02738169openalex-snapshot
Folding funnels and conformational transitions via hinge-bending motions
inferred← citeshttps://doi.org/10.1007/bf02897477openalex-snapshot
A symmetry-related sequence-structure relation of proteins
inferred← citeshttps://doi.org/10.1007/bf02932892openalex-snapshot
What is the role of thermodynamics on protein stability?
inferred← citeshttps://doi.org/10.1007/s00018-016-2340-9openalex-snapshot
Expanding role of molecular chaperones in regulating α-synuclein misfolding; implications in Parkinson’s disease
inferred← citeshttps://doi.org/10.1007/s000180050042openalex-snapshot
Recent insights on RNA folding mechanisms from catalytic RNA
inferred← citeshttps://doi.org/10.1007/s000180050072openalex-snapshot
Protein folding: concepts and perspectives
inferred← citeshttps://doi.org/10.1007/s00214-005-0026-8openalex-snapshot
Protein Folding Simulations: Combining Coarse-grained Models and All-atom Molecular Dynamics
inferred← citeshttps://doi.org/10.1007/s00232-019-00069-2openalex-snapshot
The Structural and Functional Diversity of Intrinsically Disordered Regions in Transmembrane Proteins
inferred← citeshttps://doi.org/10.1007/s002490050033openalex-snapshot
Stopped-flow dynamic light scattering as a method to monitor compaction during protein folding
inferred← citeshttps://doi.org/10.1007/s00396-015-3713-6openalex-snapshot
The fragile-to-strong dynamical crossover and the system viscoelasticity in attractive glass forming colloids
inferred← citeshttps://doi.org/10.1007/s00396-015-3770-xopenalex-snapshot
Erratum to: The fragile-to-strong dynamical crossover and the system viscoelasticity in attractive glass forming colloids
inferred← citeshttps://doi.org/10.1007/s00449-022-02696-xopenalex-snapshot
Chemical modification for improving catalytic performance of lipase B from Candida antarctica with hydrophobic proline ionic liquid
inferred← citeshttps://doi.org/10.1007/s00453-007-0178-0openalex-snapshot
Sampling Conformation Space to Model Equilibrium Fluctuations in Proteins
inferred← citeshttps://doi.org/10.1007/s004600050192openalex-snapshot
Surveying a potential energy surface by eigenvector-following
inferred← citeshttps://doi.org/10.1007/s10710-022-09427-xopenalex-snapshot
Evolving cellular automata schemes for protein folding modeling using the Rosetta atomic representation
inferred← citeshttps://doi.org/10.1007/s10930-013-9497-yopenalex-snapshot
Two Global Conformation States of a Novel NAD(P) Reductase Like Protein of the Thermogenic Appendix of the Sauromatum guttatum Inflorescence
inferred← citeshttps://doi.org/10.1007/s10955-011-0148-4openalex-snapshot
Simple Model Study of Phase Transition Properties of Isolated and Aggregated Protein
inferred← citeshttps://doi.org/10.1007/s10955-012-0456-3openalex-snapshot
Protein Sequence and Structure: Is One More Fundamental than the Other?
inferred← citeshttps://doi.org/10.1007/s11071-021-06239-zopenalex-snapshot
Deterministic and stochastic dynamics in a gene regulatory network mediated by miRNA
inferred← citeshttps://doi.org/10.1007/s11427-014-4617-2openalex-snapshot
Physicochemical bases for protein folding, dynamics, and protein-ligand binding
inferred← citeshttps://doi.org/10.1007/s11427-014-4728-9openalex-snapshot
Statistical analyses of protein folding rates from the view of quantum transition
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