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Metagenomic Shotgun Analyses Reveal Complex Patterns of Intra- and Interspecific Variation in the Intestinal Microbiomes of Codfishes

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Atlantic cod (Gadus morhua) skin mucus proteins – Focus on lectins
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Trans-oceanic genomic divergence of Atlantic cod ecotypes is associated with large inversions
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Ultrastructural Characterization of the Lower Motor System in a Mouse Model of Krabbe Disease
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Fast and accurate short read alignment with Burrows–Wheeler transform
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Quality control and preprocessing of metagenomic datasets
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Trimmomatic: a flexible trimmer for Illumina sequence data
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“Islands of Divergence” in the Atlantic Cod Genome Represent Polymorphic Chromosomal Rearrangements
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Feeding of mature cod (Gadus morhua) on the spawning grounds in Lofoten
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Brevinema andersonii gen. nov., sp. nov., an Infectious Spirochete Isolated from the Short-Tailed Shrew (Blarina brevicauda) and the White-Footed Mouse (Peromyscus leucopus)
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Description of Enterovibrio nigricans sp. nov., reclassification of Vibrio calviensis as Enterovibrio calviensis comb. nov. and emended description of the genus Enterovibrio Thompson et al. 2002
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Enterovibrio norvegicus gen. nov., sp. nov., isolated from the gut of turbot (Scophthalmus maximus) larvae: a new member of the family Vibrionaceae
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Photobacterium rosenbergii sp. nov. and Enterovibrio coralii sp. nov., vibrios associated with coral bleaching
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Genetic and environmental control of host-gut microbiota interactions
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Switching on the light: using metagenomic shotgun sequencing to characterize the intestinal microbiome of Atlantic cod
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inferredcites →https://doi.org/10.1111/mec.12846openalex-snapshot
Major H istocompatibility C omplex class II b polymorphism influences gut microbiota composition and diversity
inferredcites →https://doi.org/10.1111/mec.13050openalex-snapshot
Diet strongly influences the gut microbiota of surgeonfishes
inferredcites →https://doi.org/10.1111/mec.13592openalex-snapshot
Two adjacent inversions maintain genomic differentiation between migratory and stationary ecotypes of Atlantic cod
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Next generation sequencing shows high variation of the intestinal microbial species composition in Atlantic cod caught at a single location
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An improved genome assembly uncovers prolific tandem repeats in Atlantic cod
inferredcites →https://doi.org/10.1186/s12864-017-3899-8openalex-snapshot
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Waste Not, Want Not: Why Rarefying Microbiome Data Is Inadmissible
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Population Structure and Eigenanalysis
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PCR-TTGE Analysis of 16S rRNA from Rainbow Trout (Oncorhynchus mykiss) Gut Microbiota Reveals Host-Specific Communities of Active Bacteria
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Perceptions and Experiences of Research Participants on Gender-Based Violence Community Based Survey: Implications for Ethical Guidelines
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A Simple Sequentially Rejective Multiple Test Procedure
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Carriage of potentially fish-pathogenic bacteria in Sparus aurata cultured in Mediterranean fish farms
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Population connectivity among migratory and stationary cod Gadus morhua in the Northeast Atlantic—A review of 80 years of study
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Comparative Genomics Reveals High Genomic Diversity in the Genus Photobacterium
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Comparing Microbiome Sampling Methods in a Wild Mammal: Fecal and Intestinal Samples Record Different Signals of Host Ecology, Evolution
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A Single Vibrionales 16S rRNA Oligotype Dominates the Intestinal Microbiome in Two Geographically Separated Atlantic cod Populations
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Comparative genomics of non-pseudomonal bacterial species colonising paediatric cystic fibrosis patients
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