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Six Key Traits of Fungi: Their Evolutionary Origins and Genetic Bases

https://doi.org/10.1128/microbiolspec.funk-0036-2016
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Coprinopsis cinerea
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Phylogenetic analysis of the genus Modicella reveals an independent evolutionary origin of sporocarp-forming fungi in the Mortierellales
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First evidence of mutualism between ancient plant lineages ( H aplomitriopsida liverworts) and M ucoromycotina fungi and its response to simulated P alaeozoic changes in atmospheric CO 2
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VelB/VeA/LaeA Complex Coordinates Light Signal with Fungal Development and Secondary Metabolism
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An Oxidative Enzyme Boosting the Enzymatic Conversion of Recalcitrant Polysaccharides
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The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes
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Fossil Mycorrhizae: A Case for Symbiosis
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Estrogens inhibit mycelium-to-yeast transformation in the fungus Paracoccidioides brasiliensis: implications for resistance of females to paracoccidioidomycosis
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Altered expression of surface alpha-1,3-glucan in genetically related strains of Blastomyces dermatitidis that differ in virulence
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Genome Sequencing of the Plant Pathogen Taphrina deformans , the Causal Agent of Peach Leaf Curl
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Insights into Fungal Morphogenesis and Immune Evasion
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Plant-Polysaccharide-Degrading Enzymes from Basidiomycetes
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Hydrophobins: Multipurpose Proteins
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H OST -S ELECTIVE T OXINS AND A VIRULENCE D ETERMINANTS : What's in a Name?
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Comprehensive annotation of secondary metabolite biosynthetic genes and gene clusters of Aspergillus nidulans, A. fumigatus, A. niger and A. oryzae
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Hyphal Tip Growth Outstanding Questions
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The Most Widespread Symbiosis on Earth
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The Genome and Development-Dependent Transcriptomes of Pyronema confluens: A Window into Fungal Evolution
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Single Nucleus Genome Sequencing Reveals High Similarity among Nuclei of an Endomycorrhizal Fungus
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Novel Root-Fungus Symbiosis in Ericaceae: Sheathed Ericoid Mycorrhiza Formed by a Hitherto Undescribed Basidiomycete with Affinities to Trechisporales
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The Role of L-DOPA on Melanization and Mycelial Production in Malassezia Furfur
inferredcites →https://doi.org/10.1371/journal.pone.0064646openalex-snapshot
Evolution of the Toxins Muscarine and Psilocybin in a Family of Mushroom-Forming Fungi
inferredcites →https://doi.org/10.1371/journal.pone.0119668openalex-snapshot
Direct Detection of Fungal Siderophores on Bats with White-Nose Syndrome via Fluorescence Microscopy-Guided Ambient Ionization Mass Spectrometry
inferredcites →https://doi.org/10.1371/journal.ppat.1000044openalex-snapshot
Histoplasma Requires SID1, a Member of an Iron-Regulated Siderophore Gene Cluster, for Host Colonization
inferredcites →https://doi.org/10.1371/journal.ppat.1002086openalex-snapshot
Sporangiospore Size Dimorphism Is Linked to Virulence of Mucor circinelloides
inferredcites →https://doi.org/10.1371/journal.ppat.1003027openalex-snapshot
Morphogenesis in Fungal Pathogenicity: Shape, Size, and Surface
inferredcites →https://doi.org/10.1371/journal.ppat.1004608openalex-snapshot
Dimorphism in Fungal Pathogens of Mammals, Plants, and Insects
inferredcites →https://doi.org/10.1371/journal.ppat.1004762openalex-snapshot
Dust Devil: The Life and Times of the Fungus That Causes Valley Fever
inferredcites →https://doi.org/10.1371/journal.ppat.1005156openalex-snapshot
Dimensions of Horizontal Gene Transfer in Eukaryotic Microbial Pathogens
inferredcites →https://doi.org/10.1515/znc-2010-3-401openalex-snapshot
Current Results on Biological Activities of Lichen Secondary Metabolites: a Review
inferredcites →https://doi.org/10.2174/97816080536431120101openalex-snapshot
Dimorphic Fungi: Their Importance As Models For Differentiation And Fungal Pathogenesis
inferredcites →https://doi.org/10.2183/pjab.86.484openalex-snapshot
A historical perspective on the discovery of statins
inferredcites →https://doi.org/10.2307/3558378openalex-snapshot
Multiple origins of sequestrate fungi related to Cortinarius (Cortinariaceae)
inferredcites →https://doi.org/10.3389/fmicb.2014.00582openalex-snapshot
Expanding genomics of mycorrhizal symbiosis
inferredcites →https://doi.org/10.3732/ajb.93.6.797openalex-snapshot
A highly differentiated glomeromycotean association with the mucilage‐secreting, primitive antipodean liverwort Treubia (Treubiaceae): clues to the origins of mycorrhizas
inferredcites →https://doi.org/10.3732/ajb.94.11.1756openalex-snapshot
Glomeromycotean associations in liverworts: a molecular, cellular, and taxonomic analysis
inferredcites →https://doi.org/10.3852/08-177openalex-snapshot
Branching of fungal hyphae: regulation, mechanisms and comparison with other branching systems
inferredcites →https://doi.org/10.3852/12-347openalex-snapshot
Functional and phylogenetic implications of septal pore ultrastructure in the ascoma of Neolecta vitellina
inferredcites →https://doi.org/10.3852/13-059openalex-snapshot
Lignin-degrading peroxidases in Polyporales: an evolutionary survey based on 10 sequenced genomes
inferredcites →https://doi.org/10.3852/14-275openalex-snapshot
Cytology and molecular phylogenetics of Monoblepharidomycetes provide evidence for multiple independent origins of the hyphal habit in the Fungi
inferredcites →https://doi.org/10.3852/16-042openalex-snapshot
A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data
inferredcites →https://doi.org/10.53846/goediss-5284openalex-snapshot
The STRIPAK complex and its role in fruiting-body development of the filamentous fungus Sordaria macrospora

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.3897/imafungus.16.157337zenodo-depositor-declared
A phylogenetic and morphological study of the genus Dermoloma (Agaricales, Tricholomataceae) in Europe and North America exposes inefficiency of opportunistic species descriptions
inferred← citeshttps://doi.org/10.1002/agg2.20164openalex-snapshot
An evaluation of biological soil health indicators in four long‐term continuous agroecosystems in Canada
inferred← citeshttps://doi.org/10.1002/bies.202000160openalex-snapshot
Can natural selection and druggable targets synergize? Of nutrient scarcity, cancer, and the evolution of cooperation
inferred← citeshttps://doi.org/10.1007/698_2020_568openalex-snapshot
Bioavailability as a Microbial System Property: Lessons Learned from Biodegradation in the Mycosphere
inferred← citeshttps://doi.org/10.1007/978-3-031-06059-5_10openalex-snapshot
Metabolism and Multicellularity Revisited
inferred← citeshttps://doi.org/10.1007/978-3-031-18587-8_15openalex-snapshot
Terpenes from Fungi
inferred← citeshttps://doi.org/10.1007/978-3-031-29199-9_4openalex-snapshot
Dimorphism and Pathogenesis in Mucor Species
inferred← citeshttps://doi.org/10.1007/978-3-031-76692-3_6openalex-snapshot
Fungi and Fungi-Like Entities
inferred← citeshttps://doi.org/10.1007/978-981-96-3037-0_23openalex-snapshot
Metabolic Engineering of Fungi for Enhanced Production of Lignocellulolytic Enzymes
inferred← citeshttps://doi.org/10.1007/s00114-024-01903-xopenalex-snapshot
Fungal heat shock proteins: molecular phylogenetic insights into the host takeover
inferred← citeshttps://doi.org/10.1007/s00253-017-8683-9openalex-snapshot
Microbial ecology of the Agaricus bisporus mushroom cropping process
inferred← citeshttps://doi.org/10.1007/s00394-019-02117-yopenalex-snapshot
Anti-obesity effect of Lactobacillus rhamnosus LS-8 and Lactobacillus crustorum MN047 on high-fat and high-fructose diet mice base on inflammatory response alleviation and gut microbiota regulation
inferred← citeshttps://doi.org/10.1007/s10658-026-03227-0openalex-snapshot
Macrophomina euphorbiicola: sporulation and taxonomic emendation
inferred← citeshttps://doi.org/10.1007/s11274-026-05065-yopenalex-snapshot
Worldwide diversity and ecology of mangrove fungi: a systematic review of ITS metabarcoding studies and a quantitative, integrative analysis of raw sequence data
inferred← citeshttps://doi.org/10.1007/s12064-022-00363-zopenalex-snapshot
Pattern formation features might explain homoplasy: fertile surfaces in higher fungi as an example
inferred← citeshttps://doi.org/10.1016/b978-0-12-819990-9.00048-2openalex-snapshot
Fossil Ascomycota and Basidiomycota, With Notes on Fossil Lichens and Nematophytes
inferred← citeshttps://doi.org/10.1016/bs.abr.2021.05.007openalex-snapshot
Wood degradation in grapevine diseases
inferred← citeshttps://doi.org/10.1016/j.fbr.2020.07.002openalex-snapshot
Fungi took a unique evolutionary route to multicellularity: Seven key challenges for fungal multicellular life
inferred← citeshttps://doi.org/10.1016/j.fgb.2020.103485openalex-snapshot
Chromosome-level de novo assembly of Coprinopsis cinerea A43mut B43mut pab1-1 #326 and genetic variant identification of mutants using Nanopore MinION sequencing
inferred← citeshttps://doi.org/10.1016/j.foreco.2019.01.016openalex-snapshot
Effects of macroclimate and resource on the diversity of tropical wood-inhabiting fungi
inferred← citeshttps://doi.org/10.1016/j.myc.2019.04.002openalex-snapshot
A test of camera surveys to study fungus-animal interactions
inferred← citeshttps://doi.org/10.1016/j.tree.2021.05.006openalex-snapshot
Fungal behaviour: a new frontier in behavioural ecology
inferred← citeshttps://doi.org/10.1038/s41467-019-10767-zopenalex-snapshot
European mushroom assemblages are darker in cold climates
inferred← citeshttps://doi.org/10.1038/s41467-019-12085-wopenalex-snapshot
Comparative genomics reveals the origin of fungal hyphae and multicellularity
inferred← citeshttps://doi.org/10.1038/s41467-021-27479-yopenalex-snapshot
Genetic determinants of endophytism in the Arabidopsis root mycobiome
inferred← citeshttps://doi.org/10.1038/s41559-023-02095-9openalex-snapshot
Genomes of fungi and relatives reveal delayed loss of ancestral gene families and evolution of key fungal traits
inferred← citeshttps://doi.org/10.1038/s41579-025-01195-6openalex-snapshot
A genomic perspective on fungal diversity and evolution
inferred← citeshttps://doi.org/10.1038/s41598-018-24914-xopenalex-snapshot
Origin and evolution of fungal HECT ubiquitin ligases
inferred← citeshttps://doi.org/10.1038/s41598-022-05715-9openalex-snapshot
Fungal fruit body assemblages are tougher in harsh microclimates
inferred← citeshttps://doi.org/10.1038/s41598-026-41150-wopenalex-snapshot
Low fungal knowledge and limited identification skills: study reveals a species literacy gap among laypeople from Germany
inferred← citeshttps://doi.org/10.1038/s42003-025-08654-zopenalex-snapshot
Digging into the evolutionary history of the fungus-growing-ant symbiont, Escovopsis (Hypocreaceae)
inferred← citeshttps://doi.org/10.1080/07352689.2019.1650517openalex-snapshot
Stop the Abuse of Time! Strict Temporal Banding is not the Future of Rank-Based Classifications in Fungi (Including Lichens) and Other Organisms
inferred← citeshttps://doi.org/10.1093/femsre/fuac028openalex-snapshot
A roadmap to understanding diversity and function of coral reef-associated fungi
inferred← citeshttps://doi.org/10.1093/gbe/evag060openalex-snapshot
Signatures of Innovation and Selection in the Extremotolerant Yeast Kluyveromyces marxianus
inferred← citeshttps://doi.org/10.1098/rspb.2025.0337openalex-snapshot
Adaptive traits for chitin utilization in the saprotrophic aquatic chytrid fungus Rhizoclosmatium globosum
inferred← citeshttps://doi.org/10.1101/2022.11.15.516418openalex-snapshot
Taxonomic vs genomic fungi: contrasting evolutionary loss of protistan genomic heritage and emergence of fungal novelties
inferred← citeshttps://doi.org/10.1101/2024.02.10.579206openalex-snapshot
Evolutionary and biological mechanisms underpinning chitin degradation in aquatic fungi
inferred← citeshttps://doi.org/10.1101/2024.06.06.597693openalex-snapshot
Analyses of trait evolution and diversification reveal multiple adaptive periods in the fungal order Hymenochaetales
inferred← citeshttps://doi.org/10.1111/brv.12570openalex-snapshot
Fungal functional ecology: bringing a trait‐based approach to plant‐associated fungi
inferred← citeshttps://doi.org/10.1117/12.3010795openalex-snapshot
Fungal circuitry: mycelium as a living sensor for smart structures
inferred← citeshttps://doi.org/10.1128/msystems.01208-23openalex-snapshot
Snowball: a novel gene family required for developmental patterning of fruiting bodies of mushroom-forming fungi (Agaricomycetes)
inferred← citeshttps://doi.org/10.1146/annurev-environ-112621-090937openalex-snapshot
Pushing the Frontiers of Biodiversity Research: Unveiling the Global Diversity, Distribution, and Conservation of Fungi
inferred← citeshttps://doi.org/10.1186/s12879-019-4576-0openalex-snapshot
Did the ban on serving raw beef liver in restaurants decrease Enterohemorrhagic Escherichia coli infection in Japan?: an interrupted time-series analysis
inferred← citeshttps://doi.org/10.1186/s13068-018-1209-6openalex-snapshot
Effects of cre1 modification in the white-rot fungus Pleurotus ostreatus PC9: altering substrate preference during biological pretreatment
inferred← citeshttps://doi.org/10.1186/s43008-020-00033-zopenalex-snapshot
Unambiguous identification of fungi: where do we stand and how accurate and precise is fungal DNA barcoding?
inferred← citeshttps://doi.org/10.15252/embr.202357455openalex-snapshot
Co‐evolution within the plant holobiont drives host performance
inferred← citeshttps://doi.org/10.21425/f5fbg62358openalex-snapshot
Fungi species description rates confirm high global diversity and suggest half remain unnamed
inferred← citeshttps://doi.org/10.3389/ffunb.2021.708813openalex-snapshot
A Call for a Better Understanding of Aquatic Chytrid Biology
inferred← citeshttps://doi.org/10.3389/fmicb.2022.859411openalex-snapshot
Species Diversity, Molecular Phylogeny, and Ecological Habits of Fomitopsis (Polyporales, Basidiomycota)
inferred← citeshttps://doi.org/10.3389/fmicb.2023.1115761openalex-snapshot
Climacocystaceae fam. nov. and Gloeoporellaceae fam. nov., two new families of Polyporales (Basidiomycota)
inferred← citeshttps://doi.org/10.3389/fmolb.2024.1386598openalex-snapshot
Harnessing inter-kingdom metabolic disparities at the human-fungal interface for novel therapeutic approaches
inferred← citeshttps://doi.org/10.3390/f13101713openalex-snapshot
Soil Environment and Fauna Communities in Europe after Afforestation of Post-Agricultural Lands—A Review
inferred← citeshttps://doi.org/10.3390/jof12080602openalex-snapshot
Telomere-to-Telomere Genome Assembly of Tremella sanguinea Corroborates Its Placement in Phaeotremella and Dates Its Divergence (Tremellales)
inferred← citeshttps://doi.org/10.3390/jof7060478openalex-snapshot
Towards a Natural Classification of Hyphodontia Sensu Lato and the Trait Evolution of Basidiocarps within Hymenochaetales (Basidiomycota)
inferred← citeshttps://doi.org/10.3390/microorganisms14092075openalex-snapshot
Non-Conventional Yeasts with Probiotic Potential: Diversity, Functional Role, Sustainable Bioprocessing and Local Relevance
inferred← citeshttps://doi.org/10.4018/979-8-2600-0206-3.ch001openalex-snapshot
Evolutionary Perspectives on Fungal Hydrophobins and Their Diverse Roles Throughout the Natural World
inferred← citeshttps://doi.org/10.5943/mycosphere/14/1/11openalex-snapshot
Updated systematics of Trichaptum s.l. (Hymenochaetales, Basidiomycota)
inferred← citeshttps://doi.org/10.70675/67774ec7za271z45ebzb84cz0d48d1d2f0efopenalex-snapshot
Caractéristiques génomiques du genre fongique Mucor et évolution adaptative liée à différents modes et conditions de vie au sein du genre
inferred← citeshttps://doi.org/10.70675/e0b5fe74z86f9z469dzb77bz0812df00267dopenalex-snapshot
Development of a genetic tool for the creation of mutant collections : application to the study of the fungal cell wall in Botrytis cinerea
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