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A chloroplast DNA hairpin structure provides useful phylogenetic data within tribe Senecioneae (Asteraceae)

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1006/mpev.2000.0804openalex-snapshot

A Phylogeny of Packera (Senecioneae; Asteraceae) Based on Internal Transcribed Spacer Region Sequence Data and a Broad Sampling of Outgroups

inferredcites →https://doi.org/10.1006/mpev.2001.0954openalex-snapshot

A Phylogenetic Analysis of Doronicum (Asteraceae, Senecioneae) Based on Morphological, Nuclear Ribosomal (ITS), and Chloroplast (trnL-F) Evidence

inferredcites →https://doi.org/10.1007/pl00013885openalex-snapshot

Molecular Phylogeny of Magnolia (Magnoliaceae) Inferred from cpDNA Sequences and Evolutionary Divergence of the Floral Scents

inferredcites →https://doi.org/10.1007/s002940050130openalex-snapshot

Hairpins create minute inversions in non-coding regions of chloroplast DNA

inferredcites →https://doi.org/10.1007/s002940050517openalex-snapshot

Evolutionary significance of an unusual chloroplast DNA inversion found in two basal angiosperm lineages

inferredcites →https://doi.org/10.1007/s00606-003-0002-5openalex-snapshot

Principal features of the cpDNA evolution in Taraxacum (Asteraceae, Lactuceae): a conflict with taxonomy

inferredcites →https://doi.org/10.1007/s00606-007-0582-6openalex-snapshot

The architecture of the chloroplast psbA-trnH non-coding region in angiosperms

inferredcites →https://doi.org/10.1016/s1016-8478(23)13143-8openalex-snapshot

Widespread Occurrence of Small Inversions in the Chloroplast Genomes of Land Plants

inferredcites →https://doi.org/10.1016/s1055-7903(03)00094-0openalex-snapshot

ITS secondary structure derived from comparative analysis: implications for sequence alignment and phylogeny of the Asteraceae

inferredcites →https://doi.org/10.1043/02-64.1openalex-snapshot

Paraphyly of Tarasa (Malvaceae) and Diverse Origins of the Polyploid Species

inferredcites →https://doi.org/10.1046/j.1365-294x.2002.01427.xopenalex-snapshot

Detection of genetically divergent clone mates in apomictic dandelions

inferredcites →https://doi.org/10.1073/pnas.92.22.10379openalex-snapshot

ndhF sequence evolution and the major clades in the sunflower family.

inferredcites →https://doi.org/10.1086/317583openalex-snapshot

Microstructural Changes in Noncoding Chloroplast DNA: Interpretation, Evolution, and Utility of Indels and Inversions in Basal Angiosperm Phylogenetic Inference

inferredcites →https://doi.org/10.1139/b01-100openalex-snapshot

A re-evaluation of North AmericanTephroserisandSinosenecio(Asteraceae: Senecioneae) based on molecular and micromorphological data

inferredcites →https://doi.org/10.1139/cjb-79-10-1195openalex-snapshot

A re-evaluation of North American Tephroseris and Sinosenecio (Asteraceae: Senecioneae) based on molecular and micromorphological data

inferredcites →https://doi.org/10.1139/g99-135openalex-snapshot

Hairpins involving both inverted and direct repeats are associated with homoplasious indels in non-coding chloroplast DNA ofTaraxacum(Lactuceae: Asteraceae)

inferredcites →https://doi.org/10.1139/gen-43-4-634openalex-snapshot

Hairpins involving both inverted and direct repeats are associated with homoplasious indels in non-coding chloroplast DNA of Taraxacum (Lactuceae: Asteraceae)

inferredcites →https://doi.org/10.2307/2446155openalex-snapshot

Chloroplast DNA phylogeny, reticulate evolution, and biogeography of Paeonia (Paeoniaceae)

inferredcites →https://doi.org/10.2307/2666142openalex-snapshot

The Evolution of Non-Coding Chloroplast DNA and Its Application in Plant Systematics

inferredcites →https://doi.org/10.3732/ajb.89.8.1311openalex-snapshot

Historical biogeography and the origin of stomatal distributions in Banksia and Dryandra (Proteaceae) based on their cpDNA phylogeny

inferredcites →https://doi.org/10.3732/ajb.91.6.943openalex-snapshot

Northern hemisphere biogeography of Cerastium (Caryophyllaceae): insights from phylogenetic analysis of noncoding plastidnucleotide sequences

inferredcites →https://doi.org/10.5860/choice.37-2169openalex-snapshot

Plant systematics: a phylogenetic approach

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.11646/phytotaxa.478.2.1zenodo-depositor-declared

Molecular phylogeny and systematic evaluation of the Caragana opulens species complex (Fabaceae, Papilionoideae) based on the molecular and morphological data

inferred← citeshttps://doi.org/10.1002/tax.611002openalex-snapshot

Systematics and evolution of the needle grasses (Poaceae: Pooideae: Stipeae) based on analysis of multiple chloroplast loci, ITS, and lemma micromorphology

inferred← citeshttps://doi.org/10.1007/978-1-0716-1472-3_1openalex-snapshot

Plastid Genomes of Flowering Plants: Essential Principles

inferred← citeshttps://doi.org/10.1007/978-1-62703-995-6_1openalex-snapshot

The Plastid Genomes of Flowering Plants

inferred← citeshttps://doi.org/10.1007/s00606-007-0582-6openalex-snapshot

The architecture of the chloroplast psbA-trnH non-coding region in angiosperms

inferred← citeshttps://doi.org/10.1007/s00606-016-1372-9openalex-snapshot

Phylogenetic utility of the trnH–psbA IGR and stem-loop diversity of the 3′ UTR in Cactaceae (Caryophyllales)

inferred← citeshttps://doi.org/10.1007/s10535-011-0227-zopenalex-snapshot

Nucleotide polymorphism pattern and multiple maternal origin in Thinopyrum intermedium inferred by trnH-psbA sequences

inferred← citeshttps://doi.org/10.1007/s10535-012-0084-4openalex-snapshot

Nucleotide polymorphism pattern and multiple maternal origin in Thinopyrum intermedium inferred by trnH-psbA sequences

inferred← citeshttps://doi.org/10.1007/s11105-014-0833-yopenalex-snapshot

The Largest Plastid Genome of Monocots: a Novel Genome Type Containing AT Residue Repeats in the Slipper Orchid Cypripedium japonicum

inferred← citeshttps://doi.org/10.1016/j.gene.2013.07.026openalex-snapshot

The complete chloroplast genome of Origanum vulgare L. (Lamiaceae)

inferred← citeshttps://doi.org/10.1016/j.gene.2014.07.041openalex-snapshot

Complete chloroplast genome sequences of Praxelis (Eupatorium catarium Veldkamp), an important invasive species

inferred← citeshttps://doi.org/10.1016/j.pld.2025.09.003openalex-snapshot

Complex plastome structural variation caused by intermolecular and intramolecular recombination accounts for leaf variegation in Heptapleurum ellipticum

inferred← citeshttps://doi.org/10.1016/j.ympev.2018.05.019openalex-snapshot

Phylogeny of the gymnosperm genus Cycas L. (Cycadaceae) as inferred from plastid and nuclear loci based on a large-scale sampling: Evolutionary relationships and taxonomical implications

inferred← citeshttps://doi.org/10.1016/j.ympev.2021.107229openalex-snapshot

Phylogenetics and comparative plastome genomics of two of the largest genera of angiosperms, Piper and Peperomia (Piperaceae)

inferred← citeshttps://doi.org/10.1071/sb12006openalex-snapshot

Molecular phylogeny and systematics of Prostanthera (Lamiaceae)

inferred← citeshttps://doi.org/10.1093/hr/uhae009openalex-snapshot

Leaf variegation caused by plastome structural variation: an example from Dianella tasmanica

inferred← citeshttps://doi.org/10.1101/2023.07.18.549592openalex-snapshot

Resolving evolutionary relationships in the groundsels: phylogenomics, divergence time estimates, and biogeography of Packera (Asteraceae: Senecioneae)

inferred← citeshttps://doi.org/10.1111/j.1095-8339.2010.01063.xopenalex-snapshot

Phylogenetics and classification of the pantropical fern family Lindsaeaceae

inferred← citeshttps://doi.org/10.1111/j.1096-0031.2008.00236.xopenalex-snapshot

Evolution of small inversions in chloroplast genome: a case study from a recurrent inversion in angiosperms

inferred← citeshttps://doi.org/10.1111/j.1438-8677.2010.00411.xopenalex-snapshot

Genetic variation in Mediterranean Helichrysum italicum (Asteraceae; Gnaphalieae): do disjunct populations of subsp. microphyllum have a common origin?

inferred← citeshttps://doi.org/10.11646/phytotaxa.1.1.2openalex-snapshot

Phylogenetic analysis of non-coding plastid DNA in the presence of short inversions

inferred← citeshttps://doi.org/10.1186/1741-7007-9-19openalex-snapshot

A next-generation sequencing method for overcoming the multiple gene copy problem in polyploid phylogenetics, applied to Poa grasses

inferred← citeshttps://doi.org/10.12705/625.1openalex-snapshot

A global infrageneric classification system for the genus Crotalaria (Leguminosae) based on molecular and morphological evidence

inferred← citeshttps://doi.org/10.1371/journal.pone.0011533openalex-snapshot

Intraspecific Inversions Pose a Challenge for the trnH-psbA Plant DNA Barcode

inferred← citeshttps://doi.org/10.1371/journal.pone.0012762openalex-snapshot

The Complete Chloroplast Genome Sequence of Date Palm (Phoenix dactylifera L.)

inferred← citeshttps://doi.org/10.1371/journal.pone.0035872openalex-snapshot

Complete Chloroplast Genome Sequences of Important Oilseed Crop Sesamum indicum L

inferred← citeshttps://doi.org/10.1371/journal.pone.0224622openalex-snapshot

Characterization of 20 complete plastomes from the tribe Laureae (Lauraceae) and distribution of small inversions

inferred← citeshttps://doi.org/10.1600/036364413x661999openalex-snapshot

Relationships of Asanthus (Asteraceae, Eupatorieae)

inferred← citeshttps://doi.org/10.1600/036364413x670287openalex-snapshot

A Molecular Phylogeny of the Species-Rich Neotropical Genus Anthurium (Araceae) based on Combined Chloroplast and Nuclear DNA

inferred← citeshttps://doi.org/10.2307/25065905openalex-snapshot

An ITS phylogeny of tribe Senecioneae (Asteraceae) and a new delimitation of Senecio L.

inferred← citeshttps://doi.org/10.3390/plants10102023openalex-snapshot

Specification and DNA Barcoding of Thai Traditional Remedy for Chronic Kidney Disease: Pikad Tri-phol-sa-mut-than

inferred← citeshttps://doi.org/10.3390/plants9091150openalex-snapshot

Applied Barcoding: The Practicalities of DNA Testing for Herbals

inferred← citeshttps://doi.org/10.3732/ajb.0900228openalex-snapshot

Migration of endpoints of two genes relative to boundaries between regions of the plastid genome in the grass family (Poaceae)

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