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The Genomes of the Fungal Plant Pathogens Cladosporium fulvum and Dothistroma septosporum Reveal Adaptation to Different Hosts and Lifestyles But Also Signatures of Common Ancestry

https://doi.org/10.1371/journal.pgen.1003088

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Outgoing claims: the papers this work cites, builds on, or argues with.

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Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

inferredcites →https://doi.org/10.1006/pmpp.1995.1004openalex-snapshot

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Gene for Gene Models and Beyond: the Cladosporium fulvumTomato Pathosystem

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A Polyketide Synthase Gene Required for Biosynthesis of the Aflatoxin-like Toxin, Dothistromin

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inferredcites →https://doi.org/10.1016/j.fgb.2007.06.005openalex-snapshot

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inferredcites →https://doi.org/10.1016/j.tplants.2006.03.005openalex-snapshot

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inferredcites →https://doi.org/10.1046/j.1364-3703.2002.00129.xopenalex-snapshot

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inferredcites →https://doi.org/10.1046/j.1365-313x.1992.t01-34-00999.xopenalex-snapshot

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The Genome Portal of the Department of Energy Joint Genome Institute

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Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions.

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Repeat-Induced Point Mutation (RIP) as an Alternative Mechanism of Evolution Toward Virulence in Leptosphaeria maculans

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Overexpression of a Redox-Regulated Cutinase Gene, MfCUT1, Increases Virulence of the Brown Rot Pathogen Monilinia fructicola on Prunus spp.

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Small, Cysteine-Rich protenins and Recognition in Fungal-Plant Interactions

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inferredcites →https://doi.org/10.1094/mpmi.1998.11.10.1009openalex-snapshot

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inferredcites →https://doi.org/10.1094/phyto-04-10-0121openalex-snapshot

Sexual Reproduction and Gene Flow in the Pine Pathogen Dothistroma septosporum in British Columbia

inferredcites →https://doi.org/10.1094/phyto-97-7-0825openalex-snapshot

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inferredcites →https://doi.org/10.1094/phyto.2001.91.7.648openalex-snapshot

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inferredcites →https://doi.org/10.1101/gr.086231.108openalex-snapshot

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inferredcites →https://doi.org/10.1101/gr.88502openalex-snapshot

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inferredcites →https://doi.org/10.1105/tpc.107.052829openalex-snapshot

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inferredcites →https://doi.org/10.1111/j.1364-3703.2005.00292.xopenalex-snapshot

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inferredcites →https://doi.org/10.1111/j.1365-2672.2005.02637.xopenalex-snapshot

Aflatoxin biosynthesis gene clusters and flanking regions

inferredcites →https://doi.org/10.1111/j.1365-2958.2004.04288.xopenalex-snapshot

Cladosporium fulvum circumvents the second functional resistance gene homologue at the Cf‐4 locus (Hcr9‐4E ) by secretion of a stable avr4E isoform

inferredcites →https://doi.org/10.1111/j.1365-2958.2005.05000.xopenalex-snapshot

Oxylipins act as determinants of natural product biosynthesis and seed colonization in Aspergillus nidulans

inferredcites →https://doi.org/10.1111/j.1365-2958.2006.05076.xopenalex-snapshot

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inferredcites →https://doi.org/10.1111/j.1365-3059.2008.01948.xopenalex-snapshot

Dothistromin toxin is not required for dothistroma needle blight in Pinus radiata

inferredcites →https://doi.org/10.1111/j.1365-3059.2012.02625.xopenalex-snapshot

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Diversity in Requirement of Genetic and Epigenetic Factors for Centromere Function in Fungi

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The chemical composition of newly shed needle litter of Scots pine and some other pine species in a climatic transect. X Long-term decomposition in a Scots pine forest

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Fungal Effector Proteins

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Genomic Analysis of the Necrotrophic Fungal Pathogens Sclerotinia sclerotiorum and Botrytis cinerea

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Diverse Lifestyles and Strategies of Plant Pathogenesis Encoded in the Genomes of Eighteen Dothideomycetes Fungi

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Is an Unprecedented Dothistroma Needle Blight Epidemic Related to Climate Change?

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The Probable Error of a Mean

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Nitrogen Level and Decomposition in Scots Pine Needle Litter

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Genetics of Dothistromin Biosynthesis of Dothistroma septosporum: An Update

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Cutinase and hydrophobin interplay

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.3897/mycokeys.117.145445zenodo-depositor-declared

Comprehensive genome analysis of two Cytospora (Cytosporaceae, Diaporthales) species associated with canker disease of spruce: C. piceae and C. piceicola sp. nov.

inferred← citeshttps://doi.org/10.1002/9781118481431.ch10openalex-snapshot

Cladosporium fulvum –Tomato Pathosystem: Fungal Infection Strategy and Plant Responses

inferred← citeshttps://doi.org/10.1002/9781118735893.ch6openalex-snapshot

Dothideomycetes

inferred← citeshttps://doi.org/10.1002/cbdv.201600170openalex-snapshot

Aroma Profile of Rubus ulmifolius Flowers and Fruits During Different Ontogenetic Phases

inferred← citeshttps://doi.org/10.1002/gcc.22467openalex-snapshot

Prognostic relevance of miR‐124‐3p and its target TP53INP1 in pediatric ependymoma

inferred← citeshttps://doi.org/10.1002/jobm.202300671openalex-snapshot

Antarctica's hidden mycoviral treasures in fungi isolated from mosses: A first genomic approach

inferred← citeshttps://doi.org/10.1002/ppap.201400070openalex-snapshot

Inactivation of the Tomato Pathogen Cladosporium fulvum by an Atmospheric‐Pressure Cold Plasma Jet

inferred← citeshttps://doi.org/10.1007/978-1-4939-7804-5_1openalex-snapshot

Introduction: Overview of Fungal Genomics

inferred← citeshttps://doi.org/10.1007/978-3-030-49924-2_9openalex-snapshot

9 Fungal Genomics

inferred← citeshttps://doi.org/10.1007/978-3-319-08575-3_10openalex-snapshot

Plant Pathogenic Fungi and Oomycetes

inferred← citeshttps://doi.org/10.1007/978-3-319-10503-1_4openalex-snapshot

Repeat-Induced Point Mutation: A Fungal-Specific, Endogenous Mutagenesis Process

inferred← citeshttps://doi.org/10.1007/978-3-319-19456-1_39-1openalex-snapshot

Plant-Fungal Interactions: Special Secondary Metabolites of the Biotrophic, Necrotrophic, and Other Specific Interactions

inferred← citeshttps://doi.org/10.1007/978-3-319-19456-1_39-2openalex-snapshot

Plant-Fungal Interactions: Special Secondary Metabolites of the Biotrophic, Necrotrophic, and Other Specific Interactions

inferred← citeshttps://doi.org/10.1007/978-3-319-25001-4_39openalex-snapshot

Plant-Fungal Interactions: Special Secondary Metabolites of the Biotrophic, Necrotrophic, and Other Specific Interactions

inferred← citeshttps://doi.org/10.1007/978-3-319-27790-5_5openalex-snapshot

5 Control of Gene Expression in Phytopathogenic Ascomycetes During Early Invasion of Plant Tissue

inferred← citeshttps://doi.org/10.1007/978-3-642-39339-6_2openalex-snapshot

Fungal Genomics for Energy and Environment

inferred← citeshttps://doi.org/10.1007/978-3-642-45218-5_5openalex-snapshot

5 Fungal Chromatin and Its Role in Regulation of Gene Expression

inferred← citeshttps://doi.org/10.1007/978-3-662-44053-7_5openalex-snapshot

The Genomes of Mycosphaerella graminicola and M. fijiensis

inferred← citeshttps://doi.org/10.1007/978-3-662-46011-5_11openalex-snapshot

11 Phylogenomics Enabling Genome-Based Mycology

inferred← citeshttps://doi.org/10.1007/s00248-025-02637-7openalex-snapshot

Dynamics in Microbial Communities Associated with the Development of Soil Fatigue in Banana

inferred← citeshttps://doi.org/10.1007/s00284-018-1612-zopenalex-snapshot

Draft Genome Sequence of Phoma arachidicola Wb2 Causing Peanut Web Blotch in China

inferred← citeshttps://doi.org/10.1007/s00284-026-04969-0openalex-snapshot

Mechanism of Virulence in Fungal Pathogens with Diverse Modes of Living

inferred← citeshttps://doi.org/10.1007/s00294-015-0486-xopenalex-snapshot

Membrane transporters in self resistance of Cercospora nicotianae to the photoactivated toxin cercosporin

inferred← citeshttps://doi.org/10.1007/s00294-017-0791-7openalex-snapshot

Identification of candidate pathogenicity determinants of Rhizoctonia solani AG1-IA, which causes sheath blight disease in rice

inferred← citeshttps://doi.org/10.1007/s00425-019-03246-8openalex-snapshot

Sheath blight of rice: a review and identification of priorities for future research

inferred← citeshttps://doi.org/10.1007/s00484-019-01767-1openalex-snapshot

Logistic regression models for predicting daily airborne Alternaria and Cladosporium concentration levels in Catalonia (NE Spain)

inferred← citeshttps://doi.org/10.1007/s10126-025-10484-3openalex-snapshot

A Comparison of the Biotechnological Potential of Marine and Terrestrial Species of Two Orders of Sordariomycete Fungi

inferred← citeshttps://doi.org/10.1007/s10658-015-0678-8openalex-snapshot

Population structure and reproductive mode of Dothistroma septosporum in the Brittany peninsula of France

inferred← citeshttps://doi.org/10.1007/s10658-020-02181-9openalex-snapshot

Fulvia fulva [syn. Cladosporium fulvum, Passalora fulva] races in Argentina are evolving through genetic changes and carry polymorphic avr and ecp gene sequences

inferred← citeshttps://doi.org/10.1007/s12010-022-04087-0openalex-snapshot

Biotrophic Fungal Pathogens: a Critical Overview

inferred← citeshttps://doi.org/10.1007/s12230-014-9382-zopenalex-snapshot

A Draft Genome Sequence Reveals the Helminthosporium solani Arsenal for Cell Wall Degradation

inferred← citeshttps://doi.org/10.1007/s13225-014-0309-2openalex-snapshot

Naming and outline of Dothideomycetes–2014 including proposals for the protection or suppression of generic names

inferred← citeshttps://doi.org/10.1007/s13313-013-0217-zopenalex-snapshot

An improved artificial pathogenicity assay for Dothistroma needle blight on Pinus radiata

inferred← citeshttps://doi.org/10.1007/s13765-015-0012-3openalex-snapshot

Antifungal activity of Streptomyces albidoflavus L131 against the leaf mold pathogen Passalora fulva involves membrane leakage and oxidative damage

inferred← citeshttps://doi.org/10.1007/s40725-018-0076-5openalex-snapshot

Molecular Genetic Approaches Toward Understanding Forest-Associated Fungi and Their Interactive Roles Within Forest Ecosystems

inferred← citeshttps://doi.org/10.1007/s42161-019-00433-0openalex-snapshot

Transcriptome and proteome analyses of proteases in biotroph fungal pathogen Cladosporium fulvum

inferred← citeshttps://doi.org/10.1007/s42161-025-02011-zopenalex-snapshot

Quantifying the influence of genetic factors and life cycle strategies on plant pathogens virulence and disease severity

inferred← citeshttps://doi.org/10.1016/b978-0-12-397940-7.00001-xopenalex-snapshot

Fungal Genomics

inferred← citeshttps://doi.org/10.1016/b978-0-12-397940-7.00003-3openalex-snapshot

Evolutionary and Adaptive Role of Transposable Elements in Fungal Genomes

inferred← citeshttps://doi.org/10.1016/b978-0-12-819990-9.00012-3openalex-snapshot

Bioinformatics Approaches for Fungal Biotechnology

inferred← citeshttps://doi.org/10.1016/b978-0-12-820951-6.00012-0openalex-snapshot

Twin and family studies on epigenetics and obesity

inferred← citeshttps://doi.org/10.1016/b978-0-12-822429-8.00013-3openalex-snapshot

Diseases caused by fungi

inferred← citeshttps://doi.org/10.1016/b978-0-323-85042-1.00008-2openalex-snapshot

Dothistroma needle blight

inferred← citeshttps://doi.org/10.1016/j.bbagrm.2020.194501openalex-snapshot

Riboswitch regulation mechanisms: RNA, metabolites and regulatory proteins

inferred← citeshttps://doi.org/10.1016/j.chemosphere.2021.129970openalex-snapshot

Realizing the role of N-acyl-homoserine lactone-mediated quorum sensing in nitrification and denitrification: A review

inferred← citeshttps://doi.org/10.1016/j.fbr.2021.09.002openalex-snapshot

Next-generation sequencing provides important insights into the biology and evolution of the Botryosphaeriaceae

inferred← citeshttps://doi.org/10.1016/j.fgb.2012.11.006openalex-snapshot

Dothistromin genes at multiple separate loci are regulated by AflR

inferred← citeshttps://doi.org/10.1016/j.fgb.2015.04.011openalex-snapshot

Overview of genomic and bioinformatic resources for Zymoseptoria tritici

inferred← citeshttps://doi.org/10.1016/j.fgb.2015.09.009openalex-snapshot

Regulation of secondary metabolite production in the fungal tomato pathogen Cladosporium fulvum

inferred← citeshttps://doi.org/10.1016/j.fgb.2016.11.001openalex-snapshot

LaeA negatively regulates dothistromin production in the pine needle pathogen Dothistroma septosporum

inferred← citeshttps://doi.org/10.1016/j.fgb.2017.07.001openalex-snapshot

Evolution of polyketide synthesis in a Dothideomycete forest pathogen

inferred← citeshttps://doi.org/10.1016/j.fgb.2018.07.004openalex-snapshot

Annotation resource of tandem repeat-containing secretory proteins in sixty fungi

inferred← citeshttps://doi.org/10.1016/j.fgb.2018.08.002openalex-snapshot

Effect of deletion of a trichothecene toxin regulatory gene on the secondary metabolism transcriptome of the saprotrophic fungus Trichoderma arundinaceum

inferred← citeshttps://doi.org/10.1016/j.fgb.2019.103300openalex-snapshot

DsEcp2-1 is a polymorphic effector that restricts growth of Dothistroma septosporum in pine

inferred← citeshttps://doi.org/10.1016/j.fgb.2020.103447openalex-snapshot

Host-specificity factors in plant pathogenic fungi

inferred← citeshttps://doi.org/10.1016/j.foodres.2018.05.060openalex-snapshot

High content analysis of sea buckthorn, black chokeberry, red and white currants microbiota – A pilot study

inferred← citeshttps://doi.org/10.1016/j.freeradbiomed.2021.04.013openalex-snapshot

Distribution of methionine sulfoxide reductases in fungi and conservation of the free-methionine- R -sulfoxide reductase in multicellular eukaryotes

inferred← citeshttps://doi.org/10.1016/j.funbio.2015.10.002openalex-snapshot

The genome of Xylona heveae provides a window into fungal endophytism

inferred← citeshttps://doi.org/10.1016/j.funbio.2019.02.006openalex-snapshot

Evolutionary relics dominate the small number of secondary metabolism genes in the hemibiotrophic fungus Dothistroma septosporum

inferred← citeshttps://doi.org/10.1016/j.funeco.2020.100921openalex-snapshot

Using genome resequencing to investigate racial structure, genetic diversity, sexual reproduction and hybridisation in the pine pathogen Dothistroma septosporum

inferred← citeshttps://doi.org/10.1016/j.heliyon.2018.e01036openalex-snapshot

Identification of an intermediate for 1,8-dihydroxynaphthalene-melanin synthesis in a race-2 isolate of Fulvia fulva (syn. Cladosporium fulvum)

inferred← citeshttps://doi.org/10.1016/j.ijfoodmicro.2025.111056openalex-snapshot

Spoilage investigation of pasteurized apple juice with visual defects identifies a potentially novel Acetobacter species as the primary spoilage agent

inferred← citeshttps://doi.org/10.1016/j.jchromb.2017.04.002openalex-snapshot

Automated pathway and reaction prediction facilitates in silico identification of unknown metabolites in human cohort studies

inferred← citeshttps://doi.org/10.1016/j.jgg.2024.10.010openalex-snapshot

The dynamics of fungal genome organization and its impact on host adaptation and antifungal resistance

inferred← citeshttps://doi.org/10.1016/j.jmb.2016.08.016openalex-snapshot

A Small Number of Residues Can Determine if Linker Histones Are Bound On or Off Dyad in the Chromatosome

inferred← citeshttps://doi.org/10.1016/j.jtbi.2014.12.005openalex-snapshot

A new mechanochemical model: Coupled Ginzburg–Landau and Swift–Hohenberg equations in biological patterns of marine animals

inferred← citeshttps://doi.org/10.1016/j.mimet.2016.02.013openalex-snapshot

Comparison of pectin-degrading fungal communities in temperate forests using glycosyl hydrolase family 28 pectinase primers targeting Ascomycete fungi

inferred← citeshttps://doi.org/10.1016/j.mimet.2018.03.017openalex-snapshot

Targeted and random genetic modification of the black Sigatoka pathogen Pseudocercospora fijiensis by Agrobacterium tumefaciens-mediated transformation

inferred← citeshttps://doi.org/10.1016/j.neulet.2015.10.027openalex-snapshot

Immune reactivity in rats selected for the enhancement or elimination of aggressiveness towards humans

inferred← citeshttps://doi.org/10.1016/j.pbi.2014.03.011openalex-snapshot

Inside plant: biotrophic strategies to modulate host immunity and metabolism

inferred← citeshttps://doi.org/10.1016/j.pbi.2014.05.013openalex-snapshot

Broad compatibility in fungal root symbioses

inferred← citeshttps://doi.org/10.1016/j.pbi.2015.05.025openalex-snapshot

Chromatin-based control of effector gene expression in plant-associated fungi

inferred← citeshttps://doi.org/10.1016/j.pmpp.2018.09.006openalex-snapshot

Molecular and phenotypic characterization of pathogenic fungal strains isolated from ginseng root rot

inferred← citeshttps://doi.org/10.1016/j.pmpp.2018.11.005openalex-snapshot

Reprint of “Molecular and phenotypic characterization of pathogenic fungal strains isolated from ginseng root rot”

inferred← citeshttps://doi.org/10.1016/j.tcsw.2019.100029openalex-snapshot

Composition and biosynthetic machinery of the Blumeria graminis f. sp. hordei conidia cell wall

inferred← citeshttps://doi.org/10.1016/j.tcsw.2019.100030openalex-snapshot

Analysis of cell wall synthesis and metabolism during early germination of Blumeria graminis f. sp. hordei conidial cells induced in vitro

inferred← citeshttps://doi.org/10.1016/j.tplants.2014.04.009openalex-snapshot

Effector-triggered defence against apoplastic fungal pathogens

inferred← citeshttps://doi.org/10.1016/j.ygeno.2021.04.034openalex-snapshot

Molecular evolution and regulation of DHN melanin-related gene clusters are closely related to adaptation of different melanin-producing fungi

inferred← citeshttps://doi.org/10.1016/j.ygeno.2021.05.020openalex-snapshot

Genome assembly of Scorias spongiosa and comparative genomics provide insights into ecological adaptation of honeydew-dependent sooty mould fungi

inferred← citeshttps://doi.org/10.1016/j.ympev.2016.02.020openalex-snapshot

Colonization of maritime glacier ice by bdelloid Rotifera

inferred← citeshttps://doi.org/10.1016/j.ympev.2022.107456openalex-snapshot

Novel mating-type-associated genes and gene fragments in the genomes of Mycosphaerellaceae and Teratosphaeriaceae fungi

inferred← citeshttps://doi.org/10.1021/acs.jproteome.0c00013openalex-snapshot

Dynamic Surface Proteomes of Allergenic Fungal Conidia

inferred← citeshttps://doi.org/10.1038/nrmicro3119openalex-snapshot

Filamentous plant pathogen effectors in action

inferred← citeshttps://doi.org/10.1038/s41467-022-33815-7openalex-snapshot

A conserved enzyme of smut fungi facilitates cell-to-cell extension in the plant bundle sheath

inferred← citeshttps://doi.org/10.1038/s41564-022-01287-6openalex-snapshot

Prediction of effector protein structures from fungal phytopathogens enables evolutionary analyses

inferred← citeshttps://doi.org/10.1038/s41598-017-08010-0openalex-snapshot

Small secreted proteins from the necrotrophic conifer pathogen Heterobasidion annosum s.l. (HaSSPs) induce cell death in Nicotiana benthamiana

inferred← citeshttps://doi.org/10.1038/s41598-018-24443-7openalex-snapshot

Insight into the cold adaptation and hemicellulose utilization of Cladosporium neopsychrotolerans from genome analysis and biochemical characterization

inferred← citeshttps://doi.org/10.1038/s41598-021-99363-0openalex-snapshot

An automated and combinative method for the predictive ranking of candidate effector proteins of fungal plant pathogens

inferred← citeshttps://doi.org/10.1038/s41598-021-99415-5openalex-snapshot

Apoplastic effector candidates of a foliar forest pathogen trigger cell death in host and non-host plants

inferred← citeshttps://doi.org/10.1038/s41598-024-71220-wopenalex-snapshot

Early diagnosis of Cladosporium fulvum in greenhouse tomato plants based on visible/near-infrared (VIS/NIR) and near-infrared (NIR) data fusion

inferred← citeshttps://doi.org/10.1051/jbio/2013026openalex-snapshot

Incidence des Éléments Transposables sur l’évolution des génomes des champignons phytopathogènes et sur leur potentiel adaptatif

inferred← citeshttps://doi.org/10.1073/pnas.1424293112openalex-snapshot

Horizontal gene transfer and gene dosage drives adaptation to wood colonization in a tree pathogen

inferred← citeshttps://doi.org/10.1080/21501203.2018.1473299openalex-snapshot

Chitin and chitin-related compounds in plant–fungal interactions

inferred← citeshttps://doi.org/10.1093/bioinformatics/bty743openalex-snapshot

Traitpedia: a collaborative effort to gather species traits

inferred← citeshttps://doi.org/10.1093/gbe/evaf069openalex-snapshot

Genomic Exploration of Climate-driven Evolution and Evolutionary Convergence in Forest Pathogens

inferred← citeshttps://doi.org/10.1093/gbe/evu281openalex-snapshot

Functional Annotation of the Ophiostoma novo-ulmi Genome: Insights into the Phytopathogenicity of the Fungal Agent of Dutch Elm Disease

inferred← citeshttps://doi.org/10.1093/gbe/evw121openalex-snapshot

OcculterCut: A Comprehensive Survey of AT-Rich Regions in Fungal Genomes

inferred← citeshttps://doi.org/10.1093/molbev/msu102openalex-snapshot

Comparative Genomics of the Pine Pathogens and Beetle Symbionts in the Genus Grosmannia

inferred← citeshttps://doi.org/10.1093/molbev/msv122openalex-snapshot

Intron Invasions Trace Algal Speciation and Reveal Nearly Identical Arctic and AntarcticMicromonasPopulations

inferred← citeshttps://doi.org/10.1094/mpmi-02-14-0050-ropenalex-snapshot

Transcriptome Sequencing Uncovers the Avr5 Avirulence Gene of the Tomato Leaf Mold Pathogen Cladosporium fulvum

inferred← citeshttps://doi.org/10.1094/mpmi-04-15-0074-ropenalex-snapshot

Synergistic Action of a Metalloprotease and a Serine Protease from Fusarium oxysporum f. sp. lycopersici Cleaves Chitin-Binding Tomato Chitinases, Reduces Their Antifungal Activity, and Enhances Fungal Virulence

inferred← citeshttps://doi.org/10.1094/mpmi-05-17-0114-fiopenalex-snapshot

Specific Hypersensitive Response–Associated Recognition of New Apoplastic Effectors from Cladosporium fulvum in Wild Tomato

inferred← citeshttps://doi.org/10.1094/mpmi-08-20-0227-ropenalex-snapshot

Transcriptome Analysis of the Grape-Elsinoë ampelina Pathosystem Reveals Novel Effectors and a Robust Defense Response

inferred← citeshttps://doi.org/10.1094/mpmi-10-13-0313-cr.testopenalex-snapshot