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Metagenomic Profile of the Bacterial Communities Associated with Ixodes ricinus Ticks

https://doi.org/10.1371/journal.pone.0025604

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Landscape features and helminth co-infection shape bank vole immunoheterogeneity, with consequences for Puumala virus epidemiology

inferred← citeshttps://doi.org/10.1038/ismej.2012.171openalex-snapshot

A novel approach, based on BLSOMs (Batch Learning Self-Organizing Maps), to the microbiome analysis of ticks

inferred← citeshttps://doi.org/10.1038/ismej.2015.266openalex-snapshot

The bacterial microbiome of Dermacentor andersoni ticks influences pathogen susceptibility

inferred← citeshttps://doi.org/10.1038/ismej.2016.152openalex-snapshot

Tick microbiome and pathogen acquisition altered by host blood meal

inferred← citeshttps://doi.org/10.1038/s41467-017-00208-0openalex-snapshot

Modulation of the tick gut milieu by a secreted tick protein favors Borrelia burgdorferi colonization

inferred← citeshttps://doi.org/10.1038/s41598-020-74116-7openalex-snapshot

Microbial communities associated with the camel tick, Hyalomma dromedarii: 16S rRNA gene-based analysis

inferred← citeshttps://doi.org/10.1038/s41598-021-86177-3openalex-snapshot

Characterization of the bacterial microbiome of Rhipicephalus (Boophilus) microplus collected from Pecari tajacu “Sajino” Madre de Dios, Peru

inferred← citeshttps://doi.org/10.1038/s41598-021-87946-wopenalex-snapshot

Characterization of bacterial communities associated with blood-fed and starved tropical bed bugs, Cimex hemipterus (F.) (Hemiptera): a high throughput metabarcoding analysis

inferred← citeshttps://doi.org/10.1038/s41598-021-90177-8openalex-snapshot

Infection with Borrelia afzelii and manipulation of the egg surface microbiota have no effect on the fitness of immature Ixodes ricinus ticks

inferred← citeshttps://doi.org/10.1038/s41598-022-15681-xopenalex-snapshot

Rickettsia helvetica infection is associated with microbiome modulation in Ixodes ricinus collected from humans in Serbia

inferred← citeshttps://doi.org/10.1038/s41598-025-92402-0openalex-snapshot

Detection of Mycobacteria in Arabian camels and antimycobacterial potential of Moringa oleifera

inferred← citeshttps://doi.org/10.1038/s41598-026-58580-1openalex-snapshot

Pilot metaproteomic profiling reveals bacterial diversity and potential medical and veterinary relevance of tick microbiomes in northern Algeria

inferred← citeshttps://doi.org/10.1038/srep23214openalex-snapshot

Abrupt suspension of probiotics administration may increase host pathogen susceptibility by inducing gut dysbiosis

inferred← citeshttps://doi.org/10.1051/parasite/2025013openalex-snapshot

Culturable bacteria and fungi in Ixodes, Dermacentor, Amblyomma and Ornithodoros ticks

inferred← citeshttps://doi.org/10.1073/pnas.1613422114openalex-snapshot

Pathogen-mediated manipulation of arthropod microbiota to promote infection

inferred← citeshttps://doi.org/10.1080/03079457.2019.1635679openalex-snapshot

Metaproteomics characterization of the alphaproteobacteria microbiome in different developmental and feeding stages of the poultry red mite Dermanyssus gallinae (De Geer, 1778)

inferred← citeshttps://doi.org/10.1080/14737159.2016.1246959openalex-snapshot

Progress in the molecular diagnosis of Lyme disease

inferred← citeshttps://doi.org/10.1080/20008686.2018.1478585openalex-snapshot

Viral metagenomics reveals the presence of highly divergent quaranjavirus inRhipicephalusticks from Mozambique

inferred← citeshttps://doi.org/10.1089/vbz.2016.2074openalex-snapshot

The Challenges and Advances in Diagnosis of Vector-Borne Diseases: Where Do We Stand?

inferred← citeshttps://doi.org/10.1089/vbz.2018.2364openalex-snapshot

Denaturing Gradient Gel Electrophoresis Analysis of Bacteria in Italian Ticks and First Detection of Streptococcus equi in Rhipicephalus bursa from the Lazio Region

inferred← citeshttps://doi.org/10.1093/bib/bbs036openalex-snapshot

Reference databases for taxonomic assignment in metagenomics

inferred← citeshttps://doi.org/10.1093/femsec/fiae133openalex-snapshot

Metatranscriptomics provide insights into the role of the symbiont Midichloria mitochondrii in Ixodes ticks

inferred← citeshttps://doi.org/10.1093/femsec/fiz167openalex-snapshot

Cross-kingdom analysis of nymphal-stage Ixodes scapularis microbial communities in relation to Borrelia burgdorferi infection and load

inferred← citeshttps://doi.org/10.1093/femspd/ftab022openalex-snapshot

The genus Anaplasma: drawing back the curtain on tick–pathogen interactions

inferred← citeshttps://doi.org/10.1093/g3journal/jkaf285openalex-snapshot

Genomic prediction in insects: a case study on wing morphology traits in the jewel wasp Nasonia vitripennis

inferred← citeshttps://doi.org/10.1093/gbe/evw080openalex-snapshot

Population and Evolutionary Genomics of Amblyomma americanum , an Expanding Arthropod Disease Vector

inferred← citeshttps://doi.org/10.1093/jme/tjaa269openalex-snapshot

Discovery and Surveillance of Tick-Borne Pathogens

inferred← citeshttps://doi.org/10.1093/jme/tjad044openalex-snapshot

Metagenomic profile of the bacterial communities associated with Ixodes granulatus (Acari: Ixodidae): a potential vector of tick-borne diseases

inferred← citeshttps://doi.org/10.1093/jme/tjaf186openalex-snapshot

Rhipicephalus sanguineus s.l. ticks (Acari: Ixodidae) harbor non-divergent bacterial microbiomes in Arizona

inferred← citeshttps://doi.org/10.1093/jme/tjv251openalex-snapshot

An Expanded Reverse Line Blot Hybridization Protocol for the Simultaneous Detection of Numerous Tick-Borne Pathogens in North America

inferred← citeshttps://doi.org/10.1093/plphys/kiab395openalex-snapshot

Phenotyping stomatal closure by thermal imaging for GWAS and TWAS of water use efficiency-related genes

inferred← citeshttps://doi.org/10.1098/rspb.2018.1804openalex-snapshot

Competition between strains ofBorrelia afzeliiinside the rodent host and the tick vector

inferred← citeshttps://doi.org/10.1101/2020.05.25.20112805openalex-snapshot

The association of UV with rates of COVID-19 transmission and deaths in Mexico: the possible mediating role of vitamin D

inferred← citeshttps://doi.org/10.1101/2021.01.06.425656openalex-snapshot

Contraction-expansion dynamics of reef species in response to sea-level changes

inferred← citeshttps://doi.org/10.1101/2021.03.08.434431openalex-snapshot

Activation of a signaling pathway by the physical translocation of a chromosome

inferred← citeshttps://doi.org/10.1101/2021.11.04.467236openalex-snapshot

Geographical Distribution of Biomphalaria snails in East Africa

inferred← citeshttps://doi.org/10.1101/2022.02.23.481716openalex-snapshot

Epstein-Barr virus promotes T cell dysregulation in a humanized mouse model of multiple sclerosis

inferred← citeshttps://doi.org/10.1101/2022.11.15.516558openalex-snapshot

Factors associated with adherence to annual rabies vaccination in dogs and cats in the municipality of Curuçá, Eastern Amazon

inferred← citeshttps://doi.org/10.1101/2023.02.23.529756openalex-snapshot

Candida albicans stimulates the formation of a multi-receptor complex that mediates epithelial cell invasion during oropharyngeal infection

inferred← citeshttps://doi.org/10.1101/2023.05.04.539455openalex-snapshot

The microbiota of Amblyomma americanum reflects known westward expansion

inferred← citeshttps://doi.org/10.1101/2023.06.07.544105openalex-snapshot

Lateral frontoparietal effective connectivity differentiates and predicts state of consciousness in traumatic disorders of consciousness

inferred← citeshttps://doi.org/10.1101/2023.08.19.553994openalex-snapshot

A high-resolution gene expression atlas of the medial and lateral domains of the gynoecium of Arabidopsis

inferred← citeshttps://doi.org/10.1101/2023.10.06.561282openalex-snapshot

Depletion of SMN Protein in Mesenchymal Progenitors Impairs the Development of Bone and Neuromuscular Junction in Spinal Muscular Atrophy

inferred← citeshttps://doi.org/10.1101/2025.06.05.658045openalex-snapshot

Riding the savory horse: An active mindset and food macronutrient composition influence attentional bias toward food cues

inferred← citeshttps://doi.org/10.1101/2025.08.06.668443openalex-snapshot

Pioneer bark beetle attacks induce multifaceted localized defense responses in Norway spruce

inferred← citeshttps://doi.org/10.1111/j.1365-2672.2012.05419.xopenalex-snapshot

Multilocus sequence analysis (MLSA) of ‘Rickettsiella costelytrae' and ‘Rickettsiella pyronotae’, intracellular bacterial entomopathogens from New Zealand

inferred← citeshttps://doi.org/10.1111/jdv.14721openalex-snapshot

Endosymbiosis and its significance in dermatology

inferred← citeshttps://doi.org/10.1111/mec.13187openalex-snapshot

Concordance of bacterial communities of two tick species and blood of their shared rodent host

inferred← citeshttps://doi.org/10.1111/mec.13832openalex-snapshot

Microbiome changes through ontogeny of a tick pathogen vector

inferred← citeshttps://doi.org/10.1111/mec.14094openalex-snapshot

Evolutionary changes in symbiont community structure in ticks

inferred← citeshttps://doi.org/10.1111/mec.14391openalex-snapshot

Vertical vs. horizontal transmission of the microbiome in a key disease vector, Ixodes pacificus

inferred← citeshttps://doi.org/10.1111/mec.15922openalex-snapshot

Response to Holmes – practical considerations for vector microbiome studies

inferred← citeshttps://doi.org/10.1111/pim.12813openalex-snapshot

Update on the intricate tango between tick microbiomes and tick‐borne pathogens

inferred← citeshttps://doi.org/10.1111/tbed.13231openalex-snapshot

Folate pathway modulation inRhipicephalusticks in response to infection

inferred← citeshttps://doi.org/10.1111/trf.15752openalex-snapshot

Emerging tick‐borne diseases and blood safety: summary of a public workshop

inferred← citeshttps://doi.org/10.11158/saa.23.8.4openalex-snapshot

Prevalence of on-host ticks (Acari: Ixodidae) in small mammals collected from forest near to human vicinity in Selangor, Malaysia

inferred← citeshttps://doi.org/10.11158/saa.23.9.10openalex-snapshot

Identification and characterization of Corynebacterium lactis isolated from Amblyomma testudinarium of Sus scrofa in Malaysia

inferred← citeshttps://doi.org/10.11158/saa.24.1.12openalex-snapshot

Maternally inherited symbiotic bacteria in ticks: incidence and biological importance

inferred← citeshttps://doi.org/10.1128/aem.00323-12openalex-snapshot

Composition and Seasonal Variation of Rhipicephalus turanicus and Rhipicephalus sanguineus Bacterial Communities

inferred← citeshttps://doi.org/10.1128/aem.00641-21openalex-snapshot

Borrelia afzelii Infection in the Rodent Host Has Dramatic Effects on the Bacterial Microbiome of Ixodes ricinus Ticks

inferred← citeshttps://doi.org/10.1128/aem.01237-20openalex-snapshot

Nested Species Distribution Models of Chlamydiales in Ixodes ricinus (Tick) Hosts in Switzerland

inferred← citeshttps://doi.org/10.1128/aem.01562-15openalex-snapshot

Variation in the Microbiota of Ixodes Ticks with Regard to Geography, Species, and Sex

inferred← citeshttps://doi.org/10.1128/aem.02987-13openalex-snapshot

Diversity of Rickettsiales in the Microbiome of the Lone Star Tick, Amblyomma americanum

inferred← citeshttps://doi.org/10.1128/aem.03564-13openalex-snapshot

Discovery of Novel Rickettsiella spp. in Ixodid Ticks from Western Canada

inferred← citeshttps://doi.org/10.1128/jcm.01955-12openalex-snapshot

Close Geographic Association of Human Neoehrlichiosis and Tick Populations Carrying “Candidatus Neoehrlichia mikurensis” in Eastern Switzerland

inferred← citeshttps://doi.org/10.1128/msystems.00032-16openalex-snapshot

16S rRNA Amplicon Sequencing for Epidemiological Surveys of Bacteria in Wildlife

inferred← citeshttps://doi.org/10.1128/msystems.00037-22openalex-snapshot

Profiles of Microbial Community and Antibiotic Resistome in Wild Tick Species

inferred← citeshttps://doi.org/10.1128/spectrum.01243-23openalex-snapshot

Ixodes ricinus tick bacteriome alterations based on a climatically representative survey in Hungary

inferred← citeshttps://doi.org/10.1155/2013/805456openalex-snapshot

DGGE Identification of Microorganisms Associated withBorrelia burgdorferiSensu Lato- orAnaplasma phagocytophilum-InfectedIxodes ricinusTicks from Northwest Norway

inferred← citeshttps://doi.org/10.11606/d.42.2014.tde-13082014-201123openalex-snapshot

Efeitos da infecção por Rickettsia rickettsii sobre o perfil de expressão gênica do carrapato vetor Amblyomma cajennense.

inferred← citeshttps://doi.org/10.11606/t.10.2018.tde-28022018-100054openalex-snapshot

Study on Anaplasma, Borrelia, Coxiella, Ehrlichia, Rickettsia and Hepatozoon agents in ticks (Acari: Ixodoidea: Argasidae, Ixodidae) from Chile, and a taxonomic study on Ornithodoros capensis sensu lato (Acari: Argasidae) in South America São Paulo

inferred← citeshttps://doi.org/10.1186/1756-3305-5-61openalex-snapshot

Occurrence and identification of risk areas of Ixodes ricinus-borne pathogens: a cost-effectiveness analysis in north-eastern Italy

inferred← citeshttps://doi.org/10.1186/s12864-015-1634-xopenalex-snapshot

Whole genome capture of vector-borne pathogens from mixed DNA samples: a case study of Borrelia burgdorferi

inferred← citeshttps://doi.org/10.1186/s12866-022-02717-5openalex-snapshot

Characterization of the bacterial microbiome of Amblyomma scalpturatum and Amblyomma ovale collected from Tapirus terrestris and Amblyomma sabanerae collected from Chelonoidis denticulata, Madre de Dios- Peru

inferred← citeshttps://doi.org/10.1186/s12866-024-03468-1openalex-snapshot

Disruption of bacterial interactions and community assembly in Babesia-infected Haemaphysalis longicornis following antibiotic treatment

inferred← citeshttps://doi.org/10.1186/s13071-015-0958-3openalex-snapshot

Inhibition of the endosymbiont “Candidatus Midichloria mitochondrii” during 16S rRNA gene profiling reveals potential pathogens in Ixodes ticks from Australia

inferred← citeshttps://doi.org/10.1186/s13071-017-2199-0openalex-snapshot

Symbiont dynamics of the Tibetan tick Haemaphysalis tibetensis (Acari: Ixodidae)

inferred← citeshttps://doi.org/10.1186/s13071-017-2550-5openalex-snapshot

Recent insights into the tick microbiome gained through next-generation sequencing

inferred← citeshttps://doi.org/10.1186/s13071-019-3517-5openalex-snapshot

Surface sterilization methods impact measures of internal microbial diversity in ticks

inferred← citeshttps://doi.org/10.1186/s13071-019-3761-8openalex-snapshot

Regional biogeography of microbiota composition in the Chagas disease vector Rhodnius pallescens

inferred← citeshttps://doi.org/10.1186/s13071-020-3908-7openalex-snapshot

The scale affects our view on the identification and distribution of microbial communities in ticks

inferred← citeshttps://doi.org/10.1186/s13071-021-05144-zopenalex-snapshot

Microbial composition in Hyalomma anatolicum collected from livestock in the United Arab Emirates using next-generation sequencing

inferred← citeshttps://doi.org/10.1186/s13071-022-05161-6openalex-snapshot

Metagenomics of the midgut microbiome of Rhipicephalus microplus from China

inferred← citeshttps://doi.org/10.1186/s13071-022-05519-wopenalex-snapshot

Tick microbial associations at the crossroad of horizontal and vertical transmission pathways

inferred← citeshttps://doi.org/10.1186/s13071-022-05638-4openalex-snapshot

Characterization of the bacterial microbiome of Swedish ticks through 16S rRNA amplicon sequencing of whole ticks and of individual tick organs

inferred← citeshttps://doi.org/10.1186/s13071-024-06512-1openalex-snapshot

Deciphering the microbial communities in ticks of Inner Mongolia: ecological determinants and pathogen profiles

inferred← citeshttps://doi.org/10.1186/s13071-026-07318-zopenalex-snapshot

Molecular detection and phylogenetic characterization of pathogenic and endosymbiont microorganisms in Hyalomma ticks collected from livestock

inferred← citeshttps://doi.org/10.1186/s40168-021-01051-8openalex-snapshot

Temporal patterns in Ixodes ricinus microbial communities: an insight into tick-borne microbe interactions

inferred← citeshttps://doi.org/10.1186/s40168-022-01276-1openalex-snapshot

Quantitative microbial population study reveals geographical differences in bacterial symbionts of Ixodes ricinus

inferred← citeshttps://doi.org/10.1186/s40168-022-01378-wopenalex-snapshot

Tick transmission of Borrelia burgdorferi to the murine host is not influenced by environmentally acquired midgut microbiota

inferred← citeshttps://doi.org/10.1186/s40168-023-01696-7openalex-snapshot

Cross-alteration of murine skin and tick microbiome concomitant with pathogen transmission after Ixodes ricinus bite

inferred← citeshttps://doi.org/10.1186/s40249-023-01170-4openalex-snapshot

Evidence-practice gap analysis in the role of tick in brucellosis transmission: a scoping review

inferred← citeshttps://doi.org/10.1186/s42523-025-00498-6openalex-snapshot

Sexual and regional differences in the microbiome and functional metagenome of the lone star tick, Amblyomma americanum

inferred← citeshttps://doi.org/10.1242/jeb.212613openalex-snapshot

Evidence for a rapid cold hardening response in cultured Drosophila S2 cells

inferred← citeshttps://doi.org/10.13140/rg.2.2.13761.45928openalex-snapshot

An investigation of Coxiella burnetii and Coxiella-like bacteria in the brown dog tick (Rhipicephalus sanguineus)

inferred← citeshttps://doi.org/10.1371/journal.pgen.1011585openalex-snapshot

The recombination landscape of introgression in yeast

inferred← citeshttps://doi.org/10.1371/journal.pntd.0002753openalex-snapshot

Identification of Parasitic Communities within European Ticks Using Next-Generation Sequencing

inferred← citeshttps://doi.org/10.1371/journal.pntd.0004539openalex-snapshot

Co-infection of Ticks: The Rule Rather Than the Exception

inferred← citeshttps://doi.org/10.1371/journal.pntd.0009480openalex-snapshot

An integrated overview of the bacterial flora composition of Hyalomma anatolicum, the main vector of CCHF

inferred← citeshttps://doi.org/10.1371/journal.pone.0030692openalex-snapshot

Detection of Wolbachia in the Tick Ixodes ricinus is Due to the Presence of the Hymenoptera Endoparasitoid Ixodiphagus hookeri

inferred← citeshttps://doi.org/10.1371/journal.pone.0038062openalex-snapshot

A Rickettsiella Bacterium from the Hard Tick, Ixodes woodi: Molecular Taxonomy Combining Multilocus Sequence Typing (MLST) with Significance Testing

inferred← citeshttps://doi.org/10.1371/journal.pone.0058026openalex-snapshot

Detection of Arboviruses and Other Micro-Organisms in Experimentally Infected Mosquitoes Using Massively Parallel Sequencing

inferred← citeshttps://doi.org/10.1371/journal.pone.0061465openalex-snapshot

A 454 Survey Reveals the Community Composition and Core Microbiome of the Common Bed Bug (Cimex lectularius) across an Urban Landscape

inferred← citeshttps://doi.org/10.1371/journal.pone.0067129openalex-snapshot

Preliminary Assessment of Microbiome Changes Following Blood-Feeding and Survivorship in the Amblyomma americanum Nymph-to-Adult Transition using Semiconductor Sequencing

inferred← citeshttps://doi.org/10.1371/journal.pone.0081439openalex-snapshot

Next Generation Sequencing Uncovers Unexpected Bacterial Pathogens in Ticks in Western Europe

inferred← citeshttps://doi.org/10.1371/journal.pone.0103961openalex-snapshot

Microbial Population Analysis of the Salivary Glands of Ticks; A Possible Strategy for the Surveillance of Bacterial Pathogens

inferred← citeshttps://doi.org/10.1371/journal.pone.0104815openalex-snapshot

Ixodes pacificus Ticks Maintain Embryogenesis and Egg Hatching after Antibiotic Treatment of Rickettsia Endosymbiont

inferred← citeshttps://doi.org/10.1371/journal.pone.0131413openalex-snapshot

Comparative Metagenomic Profiling of Symbiotic Bacterial Communities Associated with Ixodes persulcatus, Ixodes pavlovskyi and Dermacentor reticulatus Ticks

inferred← citeshttps://doi.org/10.1371/journal.pone.0213384openalex-snapshot

Exploring the bacteriome in anthropophilic ticks: To investigate the vectors for diagnosis

inferred← citeshttps://doi.org/10.1371/journal.pone.0222145openalex-snapshot

Habitat disturbance and the organization of bacterial communities in Neotropical hematophagous arthropods

inferred← citeshttps://doi.org/10.1371/journal.pone.0232398openalex-snapshot

Factors affecting the microbiome of Ixodes scapularis and Amblyomma americanum

inferred← citeshttps://doi.org/10.1371/journal.pone.0268172openalex-snapshot

First insights into the microbiome of Tunisian Hyalomma ticks gained through next-generation sequencing with a special focus on H. scupense

inferred← citeshttps://doi.org/10.1371/journal.pone.0304959openalex-snapshot

The microbiota of Amblyomma americanum reflects known westward expansion

inferred← citeshttps://doi.org/10.1371/journal.ppat.1004646openalex-snapshot

Does the Arthropod Microbiota Impact the Establishment of Vector-Borne Diseases in Mammalian Hosts?

inferred← citeshttps://doi.org/10.14202/vetworld.2022.213-219openalex-snapshot

Epizootiological aspects of natural nidality of Ixodes tick-borne borreliosis in the Moscow region (Russian Federation)

inferred← citeshttps://doi.org/10.14202/vetworld.2025.1090-1100openalex-snapshot

A systematic review of the microbiome of Hyalomma Koch, 1844 ticks using next-generation sequencing of the 16S ribosomal RNA gene

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