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Biochemical and Physical Characterisation of Urinary Nanovesicles following CHAPS Treatment

https://doi.org/10.1371/journal.pone.0037279
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/jcb.22076openalex-snapshot
SED1/MFG‐E8: A Bi‐Motif protein that orchestrates diverse cellular interactions
inferredcites →https://doi.org/10.1002/pmic.200900351openalex-snapshot
ExoCarta: A compendium of exosomal proteins and RNA
inferredcites →https://doi.org/10.1002/prca.200800093openalex-snapshot
Microfiltration isolation of human urinary exosomes for characterization by MS
inferredcites →https://doi.org/10.1002/prca.200900008openalex-snapshot
Urine proteomics for profiling of human disease using high accuracy mass spectrometry
inferredcites →https://doi.org/10.1002/prca.200900030openalex-snapshot
Profiling of rat urinary proteomic patterns associated with drug‐induced nephrotoxicity using CE coupled with MS as a potential model for detection of drug‐induced adverse effects
inferredcites →https://doi.org/10.1006/abbi.2000.2265openalex-snapshot
Conditions for Solubilization of Tamm–Horsfall Protein/Uromodulin in Human Urine and Establishment of a Sensitive and Accurate Enzyme-Linked Immunosorbent Assay (ELISA) Method
inferredcites →https://doi.org/10.1007/978-1-60761-711-2_6openalex-snapshot
Isolation and Purification of Exosomes in Urine
inferredcites →https://doi.org/10.1007/bf01002506openalex-snapshot
A system for accurate immunolocalization of Tamm-Horsfall protein in renal biopsies
inferredcites →https://doi.org/10.1007/s00441-005-1148-yopenalex-snapshot
Production of the long and short forms of MFG-E8 by epidermal keratinocytes
inferredcites →https://doi.org/10.1016/0003-2697(84)90425-1openalex-snapshot
A highly sensitive fluorometric assay for “enkephalinase”, a neutral metalloendopeptidase that releases tyrosine-glycine-glycine from enkephalins
inferredcites →https://doi.org/10.1016/0022-1759(88)90043-9openalex-snapshot
Solubilisation effect of Nonidet P-40, Triton X-100 and CHAPS in the detection of MHC-like glycoproteins
inferredcites →https://doi.org/10.1016/j.bcmd.2005.05.001openalex-snapshot
Accumulation of MFG-E8/lactadherin on exosomes from immature dendritic cells
inferredcites →https://doi.org/10.1016/j.humpath.2010.02.004openalex-snapshot
Podocyte membrane vesicles in urine originate from tip vesiculation of podocyte microvilli
inferredcites →https://doi.org/10.1016/j.ymeth.2004.11.007openalex-snapshot
LDL receptor family: Isolation, production, and ligand binding analysis
inferredcites →https://doi.org/10.1016/s0002-9440(10)65190-5openalex-snapshot
Cloning and Expression of the Rat Nephrin Homolog
inferredcites →https://doi.org/10.1016/s0021-9258(17)32298-6openalex-snapshot
Cloning and functional expression of endothelin-converting enzyme from rat endothelial cells
inferredcites →https://doi.org/10.1016/s0092-8674(03)00643-3openalex-snapshot
Identification of Mouse Sperm SED1, a Bimotif EGF Repeat and Discoidin-Domain Protein Involved in Sperm-Egg Binding
inferredcites →https://doi.org/10.1016/s1357-2725(03)00262-0openalex-snapshot
Dipeptidyl peptidase IV activity and/or structure homologues (DASH) and their substrates in cancer
inferredcites →https://doi.org/10.1021/pr2003038openalex-snapshot
A Comprehensive Map of the Human Urinary Proteome
inferredcites →https://doi.org/10.1034/j.1600-0854.2000.010307.xopenalex-snapshot
Mammalian Tumor Susceptibility Gene 101 (TSG101) and the Yeast Homologue, Vps23p, Both Function in Late Endosomal Trafficking
inferredcites →https://doi.org/10.1038/ki.2008.206openalex-snapshot
Urinary exosomal transcription factors, a new class of biomarkers for renal disease
inferredcites →https://doi.org/10.1038/ki.2009.550openalex-snapshot
Tamm-Horsfall protein and urinary exosome isolation
inferredcites →https://doi.org/10.1038/ki.2010.106openalex-snapshot
Nucleic acids within urinary exosomes/microvesicles are potential biomarkers for renal disease
inferredcites →https://doi.org/10.1038/ki.2010.262openalex-snapshot
Comparison of three methods for isolation of urinary microvesicles to identify biomarkers of nephrotic syndrome
inferredcites →https://doi.org/10.1038/ncb802openalex-snapshot
The ZP domain is a conserved module for polymerization of extracellular proteins
inferredcites →https://doi.org/10.1038/nri855openalex-snapshot
Exosomes: composition, biogenesis and function
inferredcites →https://doi.org/10.1038/nrm1360openalex-snapshot
The biogenesis of multivesicular endosomes
inferredcites →https://doi.org/10.1046/j.1365-2257.2003.00541.xopenalex-snapshot
Characterisation of the biosynthesis and processing of the neutrophil granule membrane protein CD63 in myeloid cells
inferredcites →https://doi.org/10.1046/j.1432-1033.2002.02758.xopenalex-snapshot
Secretion of a peripheral membrane protein, MFG‐E8, as a complex with membrane vesicles
inferredcites →https://doi.org/10.1046/j.1432-1033.2003.03609.xopenalex-snapshot
Differential post‐translational modification of CD63 molecules during maturation of human dendritic cells
inferredcites →https://doi.org/10.1073/pnas.0403453101openalex-snapshot
Identification and proteomic profiling of exosomes in human urine
inferredcites →https://doi.org/10.1073/pnas.77.11.6368openalex-snapshot
A nondenaturing zwitterionic detergent for membrane biochemistry: design and synthesis.
inferredcites →https://doi.org/10.1073/pnas.88.14.6353openalex-snapshot
Molecular cloning and primary structure of Kell blood group protein.
inferredcites →https://doi.org/10.1074/jbc.270.25.15262openalex-snapshot
Endothelin-converting Enzyme-2 Is a Membrane-bound, Phosphoramidon-sensitive Metalloprotease with Acidic pH Optimum
inferredcites →https://doi.org/10.1074/jbc.m408873200openalex-snapshot
Functional Organization of the Sortilin Vps10p Domain
inferredcites →https://doi.org/10.1074/mcp.m000063-mcp201openalex-snapshot
Proteomics Analysis of Bladder Cancer Exosomes
inferredcites →https://doi.org/10.1084/jem.95.1.71openalex-snapshot
A MUCOPROTEIN DERIVED FROM HUMAN URINE WHICH REACTS WITH INFLUENZA, MUMPS, AND NEWCASTLE DISEASE VIRUSES
inferredcites →https://doi.org/10.1091/mbc.11.5.1829openalex-snapshot
The Tetraspanin CD63/lamp3 Cycles between Endocytic and Secretory Compartments in Human Endothelial Cells
inferredcites →https://doi.org/10.1093/jb/mvj128openalex-snapshot
Exosomes: A Common Pathway for a Specialized Function
inferredcites →https://doi.org/10.1096/fasebj.3.2.2521610openalex-snapshot
Neutral endopeptidase 24.11 (enkephalinase) and related regulators of peptide hormones 1
inferredcites →https://doi.org/10.1101/gr.772403openalex-snapshot
PANTHER: A Library of Protein Families and Subfamilies Indexed by Function
inferredcites →https://doi.org/10.1111/j.1432-1033.1992.tb17362.xopenalex-snapshot
The Asn‐linked carbohydrate chains of human Tamm‐Horsfall glycoprotein of one male
inferredcites →https://doi.org/10.1128/jvi.01658-08openalex-snapshot
Exosomes Packaging APOBEC3G Confer Human Immunodeficiency Virus Resistance to Recipient Cells
inferredcites →https://doi.org/10.1136/bmj.287.6408.1838openalex-snapshot
Protein composition of urinary casts from healthy subjects and patients with glomerulonephritis.
inferredcites →https://doi.org/10.1136/jcp.19.4.392openalex-snapshot
Factors determining the aggregation of urinary mucoprotein
inferredcites →https://doi.org/10.1152/ajprenal.00404.2002openalex-snapshot
Urinary excretion of viable podocytes in health and renal disease
inferredcites →https://doi.org/10.1152/ajprenal.00434.2006openalex-snapshot
Rapid isolation of urinary exosomal biomarkers using a nanomembrane ultrafiltration concentrator
inferredcites →https://doi.org/10.1152/physiol.00015.2005openalex-snapshot
Protein-Protein Interactions in the Tetraspanin Web
inferredcites →https://doi.org/10.1186/1479-5876-7-4openalex-snapshot
Can urinary exosomes act as treatment response markers in prostate cancer?
inferredcites →https://doi.org/10.1186/gb-2006-7-9-r80openalex-snapshot
The human urinary proteome contains more than 1500 proteins, including a large proportion of membrane proteins
inferredcites →https://doi.org/10.1210/en.136.2.779openalex-snapshot
Progesterone-induced secretion of dipeptidyl peptidase-IV (cluster differentiation antigen-26) by the uterine endometrium of the ewe and cow that costimulates lymphocyte proliferation
inferredcites →https://doi.org/10.1529/biophysj.107.114108openalex-snapshot
Visualization of Detergent Solubilization of Membranes: Implications for the Isolation of Rafts
inferredcites →https://doi.org/10.1586/epr.09.17openalex-snapshot
Exosomes: proteomic insights and diagnostic potential
inferredcites →https://doi.org/10.1681/asn.2004070564openalex-snapshot
Apical Cell Membranes Are Shed into Urine from Injured Podocytes
inferredcites →https://doi.org/10.1681/asn.2008040406openalex-snapshot
Large-Scale Proteomics and Phosphoproteomics of Urinary Exosomes
inferredcites →https://doi.org/10.1681/asn.2008060564openalex-snapshot
Characterization of PKD Protein-Positive Exosome-Like Vesicles
inferredcites →https://doi.org/10.2147/ijn.s24537openalex-snapshot
Nanoparticles isolated from blood: a reflection of vesiculability of blood cells during the isolation process
inferredcites →https://doi.org/10.2337/diabetes.52.12.2969openalex-snapshot
Nephrinuria in Diabetic Nephropathy of Type 1 Diabetes
inferredcites →https://doi.org/10.4049/jimmunol.166.12.7309openalex-snapshot
Proteomic Analysis of Dendritic Cell-Derived Exosomes: A Secreted Subcellular Compartment Distinct from Apoptotic Vesicles

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Comparing Pretreatment Strategies to Increase the Yield and Purity of Human Urinary Extracellular Vesiclesa Strategy to Extract Urinary Extracellular Vesicles
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Microarray‐Based Identification of Lectins for the Purification of Human Urinary Extracellular Vesicles Directly from Urine Samples
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Urinary extracellular vesicles: A position paper by the Urine Task Force of the International Society for Extracellular Vesicles
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Uromodulin and the study of urinary extracellular vesicles
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Proteomic alterations in extracellular vesicles induced by oncogenic PIK3CA mutations
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Management of Tamm–Horsfall Protein for Reliable Urinary Analytics
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Current Methods for the Isolation of Urinary Extracellular Vesicles
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Isolation and Characterization of Urinary Extracellular Vesicles for MicroRNA Biomarker Signature Development with Reference to MISEV Compliance
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Biomedical Involvements of Low-Abundance Proteins
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Urine Exosomes
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Small extracellular vesicles: Roles and clinical application in prostate cancer
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Urinary extracellular vesicles as a source of biomarkers reflecting renal cellular biology in human disease
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Insights into the role of connexins and specialized intercellular communication pathways in breast cancer: Mechanisms and applications
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Chromatography and its hyphenation to mass spectrometry for extracellular vesicle analysis
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Proteomic analysis of urinary extracellular vesicles reveal biomarkers for neurologic disease
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Comparison of serum and urinary nephrin levels between normal pregnancies and severe preeclampsia
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KeepEX, a simple dilution protocol for improving extracellular vesicle yields from urine
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Comparing pretreatment strategies to increase the yield and purity of human urinary extracellular vesicles
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From hundreds to thousands: Widening the normal human Urinome (1)
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Rapid isolation and proteome analysis of urinary exosome based on double interactions of Fe3O4@TiO2-DNA aptamer
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Optimization and assessment of an integrated workflow for the isolation and proteomic analysis of small urinary extracellular vesicles (suEVs)
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Advances in Analytical Technologies for Extracellular Vesicles
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Subfractionation, characterization, and in-depth proteomic analysis of glomerular membrane vesicles in human urine
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Isolation and characterization of urinary extracellular vesicles: implications for biomarker discovery
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High-yield and rapid isolation of extracellular vesicles by flocculation via orbital acoustic trapping: FLOAT
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Extracellular vesicles as a source of prostate cancer biomarkers in liquid biopsies: a decade of research
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Improved isolation strategies to increase the yield and purity of human urinary exosomes for biomarker discovery
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Rigorous characterization of urinary extracellular vesicles (uEVs) in the low centrifugation pellet - a neglected source for uEVs
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A Simplified Method to Recover Urinary Vesicles for Clinical Applications and Sample Banking
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Technical challenges of working with extracellular vesicles
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N-linked (N-) Glycoproteomics of Urimary Exosomes*
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Minimal information for studies of extracellular vesicles 2018 (MISEV2018): a position statement of the International Society for Extracellular Vesicles and update of the MISEV2014 guidelines
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Unravelling the proteomic landscape of extracellular vesicles in prostate cancer by density‐based fractionation of urine
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Urinary microvesicles: a window into the kidney
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Recovery of urinary nanovesicles from ultracentrifugation supernatants
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Isolation of Extracellular Vesicles: General Methodologies and Latest Trends
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Extracellular Vesicles in Liquid Biopsies: Potential for Disease Diagnosis
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A survey to evaluate parameters governing the selection and application of extracellular vesicle isolation methods
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Lectins as potential tools for cancer biomarker discovery from extracellular vesicles
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Characterization of Membrane Integrity and Morphological Stability of Human Salivary Exosomes
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Enhanced Type I Collagen Synthesis in Fibroblasts by Dermal Stem/Progenitor Cell-Derived Exosomes
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Comparative Study of Extracellular Vesicles from the Urine of Healthy Individuals and Prostate Cancer Patients
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Identification and functional characterization of multiple inositol polyphosphate phosphatase1 (Minpp1) isoform-2 in exosomes with potential to modulate tumor microenvironment
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A Method to Analyze Urinary Extracellular Vesicles
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Isolation of Urinary Extracellular Vesicles from Tamm- Horsfall Protein–depleted Urine and their Application in the Development of a Lectin-Exosome-Binding Assay
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Ion-Exchange Chromatography Purification of Extracellular Vesicles
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Urinary extracellular vesicles carry multiple activators and regulators of coagulation
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Use and Isolation of Urinary Exosomes as Biomarkers for Diabetic Nephropathy
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Using human urinary extracellular vesicles to study physiological and pathophysiological states and regulation of the sodium chloride cotransporter
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Diabetes with kidney injury may change the abundance and cargo of urinary extracellular vesicles
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Urinary Extracellular Vesicles as Source of Biomarkers in Kidney Diseases
inferred← citeshttps://doi.org/10.3389/fmed.2021.800889openalex-snapshot
Nanomaterials-Based Urinary Extracellular Vesicles Isolation and Detection for Non-invasive Auxiliary Diagnosis of Prostate Cancer
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Extracellular Vesicles in Renal Pathophysiology
inferred← citeshttps://doi.org/10.3389/fmolb.2024.1388294openalex-snapshot
RNA-binding protein transcripts as potential biomarkers for detecting Primary Sclerosing Cholangitis and for predicting its progression to Cholangiocarcinoma
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Exploring Small Extracellular Vesicles for Precision Medicine in Prostate Cancer
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Urinary Biomarkers in Bladder Cancer: Where Do We Stand and Potential Role of Extracellular Vesicles
inferred← citeshttps://doi.org/10.3390/diagnostics10100843openalex-snapshot
Proteomics of Extracellular Vesicles: Update on Their Composition, Biological Roles and Potential Use as Diagnostic Tools in Atherosclerotic Cardiovascular Diseases
inferred← citeshttps://doi.org/10.3390/ijms19092822openalex-snapshot
Extracellular Vesicles in Bladder Cancer: Biomarkers and Beyond
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From Tumor Metastasis towards Cerebral Ischemia—Extracellular Vesicles as a General Concept of Intercellular Communication Processes
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Single Extracellular Vesicle Analysis Performed by Imaging Flow Cytometry and Nanoparticle Tracking Analysis Evaluate the Accuracy of Urinary Extracellular Vesicle Preparation Techniques Differently
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Proteomic Profiling Identifies MARCO in Extracellular Vesicles, as a Potential Biomarker for Leishmaniasis in HIV Co-Infection
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Urinary Extracellular Vesicles for Diabetic Kidney Disease Diagnosis
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Characterization of Extracellular Vesicles Labelled with a Lipophilic Dye Using Fluorescence Nanoparticle Tracking Analysis
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Improving Isolation of Extracellular Vesicles by Utilizing Nanomaterials
inferred← citeshttps://doi.org/10.3390/molecules24193516openalex-snapshot
An Update on Isolation Methods for Proteomic Studies of Extracellular Vesicles in Biofluids
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Standardization of sample collection, isolation and analysis methods in extracellular vesicle research
inferred← citeshttps://doi.org/10.3402/jev.v4.27369openalex-snapshot
Size‐exclusion chromatography‐based enrichment of extracellular vesicles from urine samples
inferred← citeshttps://doi.org/10.3402/jev.v5.29497openalex-snapshot
Different EV enrichment methods suitable for clinical settings yield different subpopulations of urinary extracellular vesicles from human samples
inferred← citeshttps://doi.org/10.34172/bi.2023.29981openalex-snapshot
Podocyte-specific proteins in urinary extracellular vesicles of patients with IgA nephropathy: Vasorin and ceruloplasmin
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Unveiling the Complex World of Extracellular Vesicles: Novel Characterization Techniques and Manufacturing Considerations
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The Prospect of Extracting Brain-Region-Specific Exosomes in the Human Bloodstream
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Employing extracellular vesicles for non-invasive renal monitoring: A captivating prospect
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