On the public citation graph

Effects of Warm Ischemic Time on Gene Expression Profiling in Colorectal Cancer Tissues and Normal Mucosa

0 signed · 83 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

Is this your work? Sign in with ORCID and put your name on the claims that are yours.
Claim with ORCID
Reference health. See whether every reference in this work resolves to a known work and none has been retracted — and get a dated CiteStamped badge you can embed.
See reference health

What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/0471722073openalex-snapshot
Generalized, Linear, and Mixed Models
inferredcites →https://doi.org/10.1002/ijc.25516openalex-snapshot
Estimates of worldwide burden of cancer in 2008: GLOBOCAN 2008
inferredcites →https://doi.org/10.1007/978-1-4613-8122-8openalex-snapshot
Simultaneous Statistical Inference
inferredcites →https://doi.org/10.1007/978-1-59745-545-9_1openalex-snapshot
Organizational Issues in Providing High-Quality Human Tissues and Clinical Information for the Support of Biomedical Research
inferredcites →https://doi.org/10.1016/j.jpedsurg.2005.12.025openalex-snapshot
Increased expression of c-fos and c-jun in the rat small intestinal epithelium after ischemia-reperfusion injury: a possible correlation with the proliferation or apoptosis of intestinal epithelial cells
inferredcites →https://doi.org/10.1016/j.molonc.2011.08.004openalex-snapshot
Ischemia caused by time to freezing induces systematic microRNA and mRNA responses in cancer tissue
inferredcites →https://doi.org/10.1016/s0079-6123(06)58001-xopenalex-snapshot
Tissue preparation and banking
inferredcites →https://doi.org/10.1038/75556openalex-snapshot
Gene Ontology: tool for the unification of biology
inferredcites →https://doi.org/10.1038/labinvest.3700372openalex-snapshot
Biobanking of fresh frozen tissue: RNA is stable in nonfixed surgical specimens
inferredcites →https://doi.org/10.1038/modpathol.3880267openalex-snapshot
Preservation of RNA for Functional Genomic Studies: A Multidisciplinary Tumor Bank Protocol
inferredcites →https://doi.org/10.1093/bioinformatics/btk005openalex-snapshot
EDGE: extraction and analysis of differential gene expression
inferredcites →https://doi.org/10.1093/bioinformatics/btl214openalex-snapshot
Novel Unsupervised Feature Filtering of Biological Data
inferredcites →https://doi.org/10.1093/bioinformatics/btl567openalex-snapshot
Using GOstats to test gene lists for GO term association
inferredcites →https://doi.org/10.1093/bioinformatics/btn224openalex-snapshot
lumi : a pipeline for processing Illumina microarray
inferredcites →https://doi.org/10.1093/jnci/djr438openalex-snapshot
Effects of Tissue Handling on RNA Integrity and Microarray Measurements From Resected Breast Cancers
inferredcites →https://doi.org/10.1093/nar/27.1.29openalex-snapshot
KEGG: Kyoto Encyclopedia of Genes and Genomes
inferredcites →https://doi.org/10.1093/nar/28.1.27openalex-snapshot
KEGG: Kyoto Encyclopedia of Genes and Genomes
inferredcites →https://doi.org/10.1097/pdm.0b013e318169bfafopenalex-snapshot
Assessing the Impact of Tissue Devitalization Time on Genome-wide Gene Expression Analysis in Ovarian Tumor Samples
inferredcites →https://doi.org/10.1111/j.1365-2559.2009.03470.xopenalex-snapshot
Gene expression in colorectal neoplasia: modifications induced by tissue ischaemic time and tissue handling protocol
inferredcites →https://doi.org/10.1186/1471-2199-7-3openalex-snapshot
The RIN: an RNA integrity number for assigning integrity values to RNA measurements
inferredcites →https://doi.org/10.1186/1471-2407-9-409openalex-snapshot
Impact of biospecimens handling on biomarker research in breast cancer
inferredcites →https://doi.org/10.1186/1477-7819-7-36openalex-snapshot
Genomic and oncoproteomic advances in detection and treatment of colorectal cancer
inferredcites →https://doi.org/10.1186/gb-2004-5-10-r80openalex-snapshot
Bioconductor: open software development for computational biology and bioinformatics
inferredcites →https://doi.org/10.1517/14712598.7.10.1515openalex-snapshot
mRNA stability and cancer: an emerging link?
inferredcites →https://doi.org/10.32614/r.manualsopenalex-snapshot
R: A Language and Environment for Statistical Computing

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.2139/ssrn.3861561openalex-extracted
SELENBP1 Inhibits Cell Proliferation and Migration in Colorectal Cancers by Suppressing EMT
inferred← citeshttps://doi.org/10.1002/cpz1.480openalex-snapshot
Isolating Nuclei From Frozen Human Heart Tissue for Single‐Nucleus RNA Sequencing
inferred← citeshttps://doi.org/10.1007/978-1-4939-1050-2_8openalex-snapshot
A Practical Approach to Clinical and Research Biobanking
inferred← citeshttps://doi.org/10.1007/978-1-4939-3204-7_1openalex-snapshot
Factors Affecting the Use of Human Tissues in Biomedical Research: Implications in the Design and Operation of a Biorepository
inferred← citeshttps://doi.org/10.1007/978-3-319-64769-2_6openalex-snapshot
Requisite for Collection and Distribution of Tissue and Fluid Specimens for Molecular Diagnostics and Discovery in Bladder Cancer
inferred← citeshttps://doi.org/10.1007/978-981-10-5187-6_10openalex-snapshot
Pharmacogenetics and Personalized Medicine
inferred← citeshttps://doi.org/10.1007/s10585-014-9672-3openalex-snapshot
The search for the primary tumor in metastasized gastroenteropancreatic neuroendocrine neoplasm
inferred← citeshttps://doi.org/10.1007/s12032-021-01543-5openalex-snapshot
Employing bioinformatics analysis to identify hub genes and microRNAs involved in colorectal cancer
inferred← citeshttps://doi.org/10.1007/s12288-018-0975-4openalex-snapshot
Audit of Quality and Quantity of Nucleic Acid Yield from Pediatric Acute Leukemia Cases Following a Bio-banking Initiative
inferred← citeshttps://doi.org/10.1007/s40139-018-0179-5openalex-snapshot
Tumor Pre-Analytics in Molecular Pathology: Impact on Protein Expression and Analysis
inferred← citeshttps://doi.org/10.1016/b978-0-323-57019-0.50017-0openalex-snapshot
Tissue Allocation for Special Studies and Banking
inferred← citeshttps://doi.org/10.1016/j.clinbiochem.2014.01.002openalex-snapshot
The procurement, storage, and quality assurance of frozen blood and tissue biospecimens in pathology, biorepository, and biobank settings
inferred← citeshttps://doi.org/10.1016/j.compbiomed.2019.103577openalex-snapshot
Cancer classification from time series microarray data through regulatory Dynamic Bayesian Networks
inferred← citeshttps://doi.org/10.1016/j.ctarc.2023.100751openalex-snapshot
Insilco prediction of the role of the FriZZled5 gene in colorectal cancer
inferred← citeshttps://doi.org/10.1016/j.euf.2021.06.002openalex-snapshot
Biorepositories and Databanks for the Development of Novel Biomarkers for Genitourinary Cancer Prevention and Management
inferred← citeshttps://doi.org/10.1016/j.jnutbio.2017.01.014openalex-snapshot
Gene expression changes in colon tissues from colorectal cancer patients following the intake of an ellagitannin-containing pomegranate extract: a randomized clinical trial
inferred← citeshttps://doi.org/10.1016/j.jtcms.2025.03.006openalex-snapshot
Exploration of the regulatory mechanism of norcantharidin on sine oculis homeobox homolog 4 in colon cancer using transcriptome sequencing and bioinformatic
inferred← citeshttps://doi.org/10.1016/j.molonc.2014.02.002openalex-snapshot
Global gene expression changes induced by prolonged cold ischemic stress and preservation method of breast cancer tissue
inferred← citeshttps://doi.org/10.1016/j.pbiomolbio.2023.04.002openalex-snapshot
Colon cancer transcriptome
inferred← citeshttps://doi.org/10.1021/acs.jproteome.3c00665openalex-snapshot
Impact of Cold Ischemia on the Stability of 1H-MRS-Detected Metabolic Profiles of Ovarian Cancer Specimens
inferred← citeshttps://doi.org/10.1038/s41467-017-02772-xopenalex-snapshot
The effects of death and post-mortem cold ischemia on human tissue transcriptomes
inferred← citeshttps://doi.org/10.1038/srep29023openalex-snapshot
The focus on sample quality: Influence of colon tissue collection on reliability of qPCR data
inferred← citeshttps://doi.org/10.1089/bio.2014.0076openalex-snapshot
The Influence of Tissue Procurement Procedures on RNA Integrity, Gene Expression, and Morphology in Porcine and Human Liver Tissue
inferred← citeshttps://doi.org/10.1089/bio.2015.0009openalex-snapshot
Impact of in Vivo Ischemic Time on RNA Quality—Experiences from a Colon Cancer Biobank
inferred← citeshttps://doi.org/10.1089/bio.2015.0093openalex-snapshot
Applicability of Under Vacuum Fresh Tissue Sealing and Cooling to Omics Analysis of Tumor Tissues
inferred← citeshttps://doi.org/10.1089/bio.2016.0013openalex-snapshot
Effects of Cold Ischemia on Gene Expression: A Review and Commentary
inferred← citeshttps://doi.org/10.1089/bio.2018.0041openalex-snapshot
A Nucleic Acid Quality Control Strategy for Frozen Tissues from a Biobank of High-Risk Pregnancy
inferred← citeshttps://doi.org/10.1093/bib/bbac219openalex-snapshot
Discovering gene regulatory networks of multiple phenotypic groups using dynamic Bayesian networks
inferred← citeshttps://doi.org/10.1101/2022.08.30.505238openalex-snapshot
Factors influencing patterns of gene expression in large bowel mucosa
inferred← citeshttps://doi.org/10.1101/2025.03.09.642255openalex-snapshot
The effect of cold ischemia time on hypoxia, EMT, and apoptosis pathways in normal colon mucosa
inferred← citeshttps://doi.org/10.1109/access.2024.3472688openalex-snapshot
WGCNA and Machine Learning-Based Integrative Bioinformatics Analysis for Identifying Key Genes of Colorectal Cancer
inferred← citeshttps://doi.org/10.1109/bibe50027.2020.00011openalex-snapshot
Cancer Classification Analysis for Microarray Gene Expression Data by Integrating Wavelet Transform and Visual Analysis
inferred← citeshttps://doi.org/10.1109/tcbb.2020.3029846openalex-snapshot
NIMCE: A Gene Regulatory Network Inference Approach Based on Multi Time Delays Causal Entropy
inferred← citeshttps://doi.org/10.1186/s11658-024-00630-5openalex-snapshot
NXPH4 mediated by m5C contributes to the malignant characteristics of colorectal cancer via inhibiting HIF1A degradation
inferred← citeshttps://doi.org/10.1186/s12885-022-09436-0openalex-snapshot
Serum-based measurements of stromal activation through ADAM12 associate with poor prognosis in colorectal cancer
inferred← citeshttps://doi.org/10.1186/s12935-016-0296-3openalex-snapshot
Time course analysis based on gene expression profile and identification of target molecules for colorectal cancer
inferred← citeshttps://doi.org/10.1186/s12957-022-02561-xopenalex-snapshot
Downregulation of B3GNT6 is a predictor of poor outcomes in patients with colorectal cancer
inferred← citeshttps://doi.org/10.1186/s12964-025-02627-9openalex-snapshot
BAP1-mediated stabilization of SUFU enhances E2F1 activity and promotes colorectal tumorigenesis
inferred← citeshttps://doi.org/10.1186/s12967-019-2124-8openalex-snapshot
In search of an evidence-based strategy for quality assessment of human tissue samples: report of the tissue Biospecimen Research Working Group of the Spanish Biobank Network
inferred← citeshttps://doi.org/10.1245/s10434-018-6697-xopenalex-snapshot
Tumor Cell Content and RNA Integrity of Surgical Tissues from Different Types of Tumors and Its Correlation with Ex Vivo and In Vivo Ischemia
inferred← citeshttps://doi.org/10.1371/journal.pone.0123194openalex-snapshot
Use of Formalin-Fixed Paraffin-Embedded Samples for Gene Expression Studies in Breast Cancer Patients
inferred← citeshttps://doi.org/10.1371/journal.pone.0137995openalex-snapshot
Enriched Bone Marrow Derived Disseminated Neuroblastoma Cells Can Be a Reliable Source for Gene Expression Studies—A Validation Study
inferred← citeshttps://doi.org/10.1371/journal.pone.0154326openalex-snapshot
Biobanking of Fresh-Frozen Human Adenocarcinomatous and Normal Colon Tissues: Which Parameters Influence RNA Quality?
inferred← citeshttps://doi.org/10.1371/journal.pone.0262654openalex-snapshot
Assessing the quality of RNA isolated from human breast tissue after ambient room temperature exposure
inferred← citeshttps://doi.org/10.1515/med-2020-0128openalex-snapshot
GABRD promotes progression and predicts poor prognosis in colorectal cancer
inferred← citeshttps://doi.org/10.1515/med-2022-0532openalex-snapshot
SELENBP1 inhibits progression of colorectal cancer by suppressing epithelial–mesenchymal transition
inferred← citeshttps://doi.org/10.1590/1678-5150-pvb-7292openalex-snapshot
Veterinary disease-oriented Biobanking for biomolecular analysis based on frozen tumor biopsies, cell culture and forensic tissues
inferred← citeshttps://doi.org/10.17826/cumj.1128653openalex-snapshot
Classification of colorectal cancer based on gene sequencing data with XGBoost model: An application of public health informatics
inferred← citeshttps://doi.org/10.3724/cbls.2026005openalex-snapshot
Research progress on the impact of pre-analytical variables on RNA quality in biobank tissue samples
inferred← citeshttps://doi.org/10.3892/or.2014.3053openalex-snapshot
Gene profiling and bioinformatics analyses reveal time course differential gene expression in surgically resected colorectal tissues
inferred← citeshttps://doi.org/10.48550/arxiv.2110.08411openalex-snapshot
Multi-group Gaussian Processes
inferred← citeshttps://doi.org/10.5858/arpa.2019-0009-saopenalex-snapshot
Preanalytics and Precision Pathology: Pathology Practices to Ensure Molecular Integrity of Cancer Patient Biospecimens for Precision Medicine
inferred← citeshttps://doi.org/10.6000/2292-2598.2015.03.02.2openalex-snapshot
Frozen in Translation: Biobanks as a Tool for Cancer Research
inferred← citeshttps://doi.org/10.6084/m9.figshare.19533788openalex-snapshot
Additional file 1 of Downregulation of B3GNT6 is a predictor of poor outcomes in patients with colorectal cancer
inferred← citeshttps://doi.org/10.6084/m9.figshare.19533791openalex-snapshot
Additional file 2 of Downregulation of B3GNT6 is a predictor of poor outcomes in patients with colorectal cancer
inferred← citeshttps://doi.org/10.6084/m9.figshare.19586860openalex-snapshot
Additional file 1 of Serum-based measurements of stromal activation through ADAM12 associate with poor prognosis in colorectal cancer
inferred← citeshttps://doi.org/10.6084/m9.figshare.26793744openalex-snapshot
Additional file 1 of NXPH4 mediated by m5C contributes to the malignant characteristics of colorectal cancer via inhibiting HIF1A degradation
inferred← citeshttps://doi.org/10.7180/kmj.2020.35.1.26openalex-snapshot
Influence of Cold Ischemia Time and Storage Period on DNA Quality and Biomarker Research in Biobanked Colorectal Cancer Tissues
Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.