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In-Depth Tanscriptomic Analysis on Giant Freshwater Prawns

https://doi.org/10.1371/journal.pone.0060839

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Site of vitellogenin synthesis determined from a cDNA encoding a vitellogenin fragment in the freshwater giant prawn,Macrobrachium rosenbergii

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Determination of amino acid sequence and site of mRNA expression of four vitellins in the giant freshwater prawn,Macrobrachium rosenbergii

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RNA-seq: from technology to biology

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Mechanisms of heavy-metal sequestration and detoxification in crustaceans: a review

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The Penaeus monodon Chitinase 1 Gene Is Differentially Expressed in the Hepatopancreas During the Molt Cycle

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Development of Microsatellite Markers from an Enriched Genomic Library for the Genetic Analysis of the Malaysian Giant Freshwater Prawn, Macrobrachium rosenbergii

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Transcriptome profiling in crustaceans as a tool for ecotoxicogenomics

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Isolation and characterization of microsatellite loci in giant freshwater prawn, Macrobrachium rosenbergii

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Global diversity of shrimps (Crustacea: Decapoda: Caridea) in freshwater

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Prophenoloxidase activating enzyme-III from giant freshwater prawn Macrobrachium rosenbergii: characterization, expression and specific enzyme activity

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Possible significance of variation in the larval development of palaemonid shrimp

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Accumulation and subcellular distribution of metals (Cu, Fe, Mn, Pb and Zn) in the Mediterranean mussel Mytilus galloprovincialis during a field transplant experiment

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Polyunsaturated fatty acid nutrition in juvenile freshwater prawn Macrobrachium rosenbergii

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Apparent chitin digestibility in penaeid shrimp

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Metabolism of vertebrate-type steroids by tissues of three crustacean species

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In vivo and in vitro effects of heavy metals on DNA polymerase activities in the digestive gland of Mytilus galloprovincialis Lam

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Gene discovery from an ovary cDNA library of oriental river prawn Macrobrachium nipponense by ESTs annotation

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Transcriptome analysis of gills from the white shrimp Litopenaeus vannamei infected with White Spot Syndrome Virus

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Effect of infectious hypodermal and haematopoietic necrosis virus (IHHNV) infection on caspase 3c expression and activity in freshwater prawn Macrobrachium rosenbergii

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First report on interferon related developmental regulator-1 from Macrobrachium rosenbergii: Bioinformatic analysis and gene expression

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Immune role of MrNFκBI-α, an IκB family member characterized in prawn M. rosenbergii

inferredcites →https://doi.org/10.1016/j.neuroscience.2006.10.056openalex-snapshot

Oxidative stress and mitochondrial dysfunction in neurodegenerative diseases

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Copper-induced formation of reactive oxygen species causes cell death and disruption of calcium homeostasis in trout hepatocytes

inferredcites →https://doi.org/10.1016/j.ympev.2009.01.002openalex-snapshot

Evolution of life history traits in Asian freshwater prawns of the genus Macrobrachium (Crustacea: Decapoda: Palaemonidae) based on multilocus molecular phylogenetic analysis

inferredcites →https://doi.org/10.1016/s0027-5107(97)00252-2openalex-snapshot

DNA strand breakage in aquatic organisms and the potential value of the comet assay in environmental monitoring

inferredcites →https://doi.org/10.1016/s0044-8486(99)00173-8openalex-snapshot

Performance of Macrobrachium rosenbergii broodstock fed diets with different fatty acid composition

inferredcites →https://doi.org/10.1016/s0166-445x(00)00096-5openalex-snapshot

Histopathology of the hepatopancreas and gills of the prawn Macrobrachium malcolmsonii exposed to endosulfan

inferredcites →https://doi.org/10.1016/s0166-445x(00)00154-5openalex-snapshot

Cadmium induces apoptosis and genotoxicity in rainbow trout hepatocytes through generation of reactive oxygene species

inferredcites →https://doi.org/10.1016/s0921-8777(99)00075-0openalex-snapshot

Nucleotide excision repair endonuclease genes in Drosophila melanogaster

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Fatty Acid Metabolism of Macrobrachium borellii: Dietary Origin of Arachidonic and Eicosapentaenoic Acids

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Daphnia magna Ecotoxicogenomics Provides Mechanistic Insights into Metal Toxicity

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Gene Ontology: tool for the unification of biology

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Mitochondrial dysfunction and oxidative stress in neurodegenerative diseases

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Mapping and quantifying mammalian transcriptomes by RNA-Seq

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Bioactive roles of carotenoids and retinoids in crustaceans

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Changes in fatty acid profile during larval development of freshwater prawn Macrobrachium rosenbergii (de Man)

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Effect of dietary cellulose level on specific dynamic action and ammonia excretion of the prawnMacrobrachium rosenbergii(De Man 1879)

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Effects of dietary carbohydrates on growth and body components of the giant freshwater prawn,Macrobrachium rosenbergii

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Nutritional Requirements of the Freshwater Prawn Macrobrachium rosenbergii: Comparisons with Species of Penaeid Shrimp

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TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets

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Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research

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SOAP: short oligonucleotide alignment program

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Infernal 1.0: inference of RNA alignments

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SOAP2: an improved ultrafast tool for short read alignment

inferredcites →https://doi.org/10.1093/bioinformatics/btp670openalex-snapshot

QDD: a user-friendly program to select microsatellite markers and design primers from large sequencing projects

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

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The KEGG databases at GenomeNet

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Rfam: an RNA family database

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Rfam: annotating non-coding RNAs in complete genomes

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Rate and Pattern of Mutation at Microsatellite Loci in Maize

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The Significance of Digital Gene Expression Profiles

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Microsatellite loci in the eastern form of the giant freshwater prawn (Macrobrachium rosenbergii)

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Isolation and characterization of microsatellites in giant freshwater prawn Macrobrachium rosenbergii

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Identification Of The Essential Amino Acids Of The Freshwater Shrimp, Macrobrachium ohione1

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Prevalence of Infectious Hypodermal and Hematopoietic Necrosis Virus (IHHNV) and White Spot Syndrome Virus (WSSV) in Litopenaeus vannamei in the Pacific Ocean off the Coast of Panama

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Microsatellite DNA markers in the giant freshwater prawn, Macrobrachium rosenbergii: a tool for genetic analysis

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A Genomic Perspective on Protein Families

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ELIMINATION OF SEQUESTERED MATERIAL FROM THE GILLS OF DECAPOD CRUSTACEANS

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inferredcites →https://doi.org/10.1371/journal.pone.0009327openalex-snapshot

The Porcelain Crab Transcriptome and PCAD, the Porcelain Crab Microarray and Sequence Database

inferredcites →https://doi.org/10.1651/c-2597.1openalex-snapshot

Reproductive Cycle, Ovarian Development, and Vertebrate-Type Steroids Profile in the Freshwater Prawn Macrobrachium Rosenbergii

inferredcites →https://doi.org/10.2108/zsj.14.65openalex-snapshot

Isolation of a cDNA Encoding a Chitinase Family Protein from Cuticular Tissues of the Kuruma Prawn Penaeus japonicus

inferredcites →https://doi.org/10.2307/1549320openalex-snapshot

Epithelial Cytology and Function in the Digestive Gland of Thenus Orientalis (Decapoda: Scyllaridae)

inferredcites →https://doi.org/10.2307/3593148openalex-snapshot

Effects of Hypoxia and Hypercapnic Hypoxia on the Localization and the Elimination ofVibrio campbelliiinLitopenaeus vannamei, the Pacific White Shrimp

inferredcites →https://doi.org/10.2307/4134577openalex-snapshot

Immune Defense Reduces Respiratory Fitness inCallinectes sapidus,the Atlantic Blue Crab

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Effects of All-trans retinoic acid on germ cell development of embryos and larvae of the giant freshwater prawn, Macrobrachium rosenbergii

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Appendage deformity syndrome-a nutritional disease of Macrobrachium rosenbergii

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In vitro metabolism of steroid hormones by ovary and hepatopancreas of the crustacean Penaeid shrimp Marsupenaeus japonicus

inferredcites →https://doi.org/10.4067/s0717-95022009000100022openalex-snapshot

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Deep parallel sequencing reveals conserved and novel miRNAs in gill and hepatopancreas of giant freshwater prawn

inferred← citeshttps://doi.org/10.1016/j.fsi.2017.05.059openalex-snapshot

Transcriptome profiling of the Macrobrachium rosenbergii lymphoid organ under the white spot syndrome virus challenge

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