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Comprehensive Genomic Analysis and Expression Profiling of Phospholipase C Gene Family during Abiotic Stresses and Development in Rice

https://doi.org/10.1371/journal.pone.0062494
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Lipid‐Mediated Signaling
inferredcites →https://doi.org/10.1007/0-387-27600-9_9openalex-snapshot
Cracking the Green Paradigm: Functional Coding of Phosphoinositide Signals in Plant Stress Responses
inferredcites →https://doi.org/10.1007/bf00017916openalex-snapshot
Analysis of the 5? flanking region responsible for the endosperm-specific expression of a rice glutelin chimeric gene in transgenic tobacco
inferredcites →https://doi.org/10.1007/bf00049344openalex-snapshot
Requirement of a CCGAC cis-acting element for cold induction of the BN115 gene from winter Brassica napus
inferredcites →https://doi.org/10.1007/s00425-007-0686-9openalex-snapshot
Enhanced expression of phospholipase C 1 (ZmPLC1) improves drought tolerance in transgenic maize
inferredcites →https://doi.org/10.1007/s00438-003-0925-0openalex-snapshot
Isolation and characterization of a phospholipase C delta isoform from pea that is regulated by light in a tissue specific manner
inferredcites →https://doi.org/10.1007/s00438-007-0267-4openalex-snapshot
Expression analysis of calcium-dependent protein kinase gene family during reproductive development and abiotic stress conditions in rice (Oryza sativa L. ssp. indica)
inferredcites →https://doi.org/10.1007/s11103-011-9862-1openalex-snapshot
C2 domain is responsible for targeting rice phosphoinositide specific phospholipase C
inferredcites →https://doi.org/10.1007/s11105-011-0360-zopenalex-snapshot
Characterization and Functional Validation of Tobacco PLC Delta for Abiotic Stress Tolerance
inferredcites →https://doi.org/10.1007/s12298-008-0005-3openalex-snapshot
Emergence of a novel calcium signaling pathway in plants: CBL-CIPK signaling network
inferredcites →https://doi.org/10.1016/j.bbalip.2005.12.010openalex-snapshot
Signalling diacylglycerol pyrophosphate, a new phosphatidic acid metabolite
inferredcites →https://doi.org/10.1016/j.pbi.2006.07.011openalex-snapshot
The role of phospholipase D in plant stress responses
inferredcites →https://doi.org/10.1016/j.pbi.2007.07.003openalex-snapshot
Involvement of phospholipid signaling in plant growth and hormone effects
inferredcites →https://doi.org/10.1016/j.plaphy.2008.04.015openalex-snapshot
Expression and evolution of the phosphoinositide-specific phospholipase C gene family in Arabidopsis thaliana
inferredcites →https://doi.org/10.1016/j.tibs.2010.08.003openalex-snapshot
PLC regulation: emerging pictures for molecular mechanisms
inferredcites →https://doi.org/10.1016/s0014-5793(03)01388-7openalex-snapshot
The V‐PLC3 gene encodes a putative plasma membrane‐localized phosphoinositide‐specific phospholipase C whose expression is induced by abiotic stress in mung bean (Vigna radiata L.)1
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Abiotic stress signalling pathways: specificity and cross-talk
inferredcites →https://doi.org/10.1016/s1369-5266(02)00268-6openalex-snapshot
Phospholipid signalling in plant defence
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Guard cell abscisic acid signalling and engineering drought hardiness in plants
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Genome-wide analysis of the phospholipase D family in Oryza sativa and functional characterization of PLDβ1 in seed germination
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Multiple phosphoinositide‐specific phospholipases C in oat roots: characterization and partial purification
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Characterization of a plasma membrane‐associated phosphoinositide‐specific phospholipase C from soybean
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Interaction between two cis ‐acting elements, ABRE and DRE, in ABA‐dependent expression of Arabidopsis rd29A gene in response to dehydration and high‐salinity stresses
inferredcites →https://doi.org/10.1074/jbc.m408799200openalex-snapshot
A Novel Phosphatidylcholine-hydrolyzing Phospholipase C Induced by Phosphate Starvation in Arabidopsis
inferredcites →https://doi.org/10.1080/07352689.2011.572033openalex-snapshot
Biology and Biochemistry of Plant Phospholipases
inferredcites →https://doi.org/10.1093/jxb/erh140openalex-snapshot
Isolation of cDNAs encoding typical and novel types of phosphoinositide-specific phospholipase C from the moss Physcomitrella patens
inferredcites →https://doi.org/10.1093/jxb/err039openalex-snapshot
The phosphatidylcholine-hydrolysing phospholipase C NPC4 plays a role in response of Arabidopsis roots to salt stress
inferredcites →https://doi.org/10.1093/molbev/msr121openalex-snapshot
MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
inferredcites →https://doi.org/10.1093/mp/ssn047openalex-snapshot
The Receptor-Like Cytoplasmic Kinase (OsRLCK) Gene Family in Rice: Organization, Phylogenetic Relationship, and Expression during Development and Stress
inferredcites →https://doi.org/10.1093/mp/ssq005openalex-snapshot
Plant Phosphatidylcholine-Hydrolyzing Phospholipases C NPC3 and NPC4 with Roles in Root Development and Brassinolide Signaling in Arabidopsis thaliana
inferredcites →https://doi.org/10.1093/nar/18.23.6845openalex-snapshot
Multiple protein factors bind to a rice glutelin promoter region
inferredcites →https://doi.org/10.1093/nar/30.1.325openalex-snapshot
PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences
inferredcites →https://doi.org/10.1094/mpmi-20-7-0740openalex-snapshot
pSITE Vectors for Stable Integration or Transient Expression of Autofluorescent Protein Fusions in Plants: Probing Nicotiana benthamiana-Virus Interactions
inferredcites →https://doi.org/10.1101/pdb.prot4995openalex-snapshot
In Planta Visualization of Protein Interactions Using Bimolecular Fluorescence Complementation (BiFC)
inferredcites →https://doi.org/10.1104/pp.004770openalex-snapshot
Inositol Phospholipid Metabolism in Arabidopsis. Characterized and Putative Isoforms of Inositol Phospholipid Kinase and Phosphoinositide-Specific Phospholipase C
inferredcites →https://doi.org/10.1104/pp.102.1.165openalex-snapshot
Purification and Characterization of Membrane-Bound Inositol Phospholipid-Specific Phospholipase C from Suspension-Cultured Rice (Oryza sativa L.) Cells (Identification of a Regulatory Factor)
inferredcites →https://doi.org/10.1104/pp.116.1.239openalex-snapshot
Molecular and Enzymatic Characterization of Three Phosphoinositide-Specific Phospholipase C Isoforms from Potato1
inferredcites →https://doi.org/10.1104/pp.125.3.1499openalex-snapshot
A Role for Inositol 1,4,5-Trisphosphate in Gravitropic Signaling and the Retention of Cold-Perceived Gravistimulation of Oat Shoot Pulvini
inferredcites →https://doi.org/10.1105/tpc.001115openalex-snapshot
Calmodulins and Calcineurin B–like Proteins
inferredcites →https://doi.org/10.1105/tpc.006130openalex-snapshot
Arabidopsis AtMYC2 (bHLH) and AtMYB2 (MYB) Function as Transcriptional Activators in Abscisic Acid Signaling
inferredcites →https://doi.org/10.1105/tpc.006676openalex-snapshot
Arabidopsis Inositol Polyphosphate 6-/3-Kinase Is a Nuclear Protein That Complements a Yeast Mutant Lacking a Functional ArgR-Mcm1 Transcription Complex
inferredcites →https://doi.org/10.1105/tpc.109.071720openalex-snapshot
Nonspecific Phospholipase C NPC4 Promotes Responses to Abscisic Acid and Tolerance to Hyperosmotic Stress inArabidopsis
inferredcites →https://doi.org/10.1105/tpc.13.5.1143openalex-snapshot
Arabidopsis PLC1 Is Required for Secondary Responses to Abscisic Acid Signals
inferredcites →https://doi.org/10.1111/j.1365-3040.2009.02027.xopenalex-snapshot
Over‐expression of Brassica napus phosphatidylinositol‐phospholipase C2 in canola induces significant changes in gene expression and phytohormone distribution patterns, enhances drought tolerance and promotes early flowering and maturation†
inferredcites →https://doi.org/10.1111/j.1365-313x.2004.02219.xopenalex-snapshot
Visualization of protein interactions in living plant cells using bimolecular fluorescence complementation
inferredcites →https://doi.org/10.1111/j.1365-313x.2007.03292.xopenalex-snapshot
Visualization of phosphatidylinositol 4,5‐bisphosphate in the plasma membrane of suspension‐cultured tobacco BY‐2 cells and whole Arabidopsis seedlings
inferredcites →https://doi.org/10.1111/j.1365-313x.2008.03582.xopenalex-snapshot
Phospholipase C5 (NPC5) is involved in galactolipid accumulation during phosphate limitation in leaves of Arabidopsis
inferredcites →https://doi.org/10.1111/j.1365-313x.2010.04136.xopenalex-snapshot
Identification of tomato phosphatidylinositol-specific phospholipase-C (PI-PLC) family members and the role of PLC4 and PLC6 in HR and disease resistance
inferredcites →https://doi.org/10.1111/j.1469-8137.2004.01069.xopenalex-snapshot
Gene‐specific expression and calcium activation of Arabidopsis thaliana phospholipase C isoforms
inferredcites →https://doi.org/10.1111/j.1469-8137.2009.02938.xopenalex-snapshot
The CBL–CIPK Ca 2+ ‐decoding signaling network: function and perspectives
inferredcites →https://doi.org/10.1146/annurev.arplant.52.1.211openalex-snapshot
P LANT P HOSPHOLIPASES
inferredcites →https://doi.org/10.1186/1471-2164-11-435openalex-snapshot
Protein phosphatase complement in rice: genome-wide identification and transcriptional analysis under abiotic stress conditions and reproductive development
inferredcites →https://doi.org/10.1186/1471-2164-6-59openalex-snapshot
Gene expression levels assessed by oligonucleotide microarray analysis and quantitative real-time RT-PCR – how well do they correlate?
inferredcites →https://doi.org/10.1194/jlr.r800098-jlr200openalex-snapshot
Plant phospholipid signaling: “in a nutshell”
inferredcites →https://doi.org/10.1371/journal.pone.0030947openalex-snapshot
Rice Phospholipase A Superfamily: Organization, Phylogenetic and Expression Analysis during Abiotic Stresses and Development
inferredcites →https://doi.org/10.2174/138920210790217981openalex-snapshot
Expressional Analysis and Role of Calcium Regulated Kinases in Abiotic Stress Signaling
inferredcites →https://doi.org/10.4161/psb.20385openalex-snapshot
Comprehensive expression analysis of rice phospholipase D gene family during abiotic stresses and development
inferredcites →https://doi.org/10.4161/psb.3.2.5303openalex-snapshot
Plant signaling in stress

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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The Phosphoinositide-Specific Phospholipase C1 Modulates Flowering Time and Grain Size in Rice
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Primer Design Using Primer Express® for SYBR Green-Based Quantitative PCR
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PI-PLC: Phosphoinositide-Phospholipase C in Plant Signaling
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Emerging role of phospholipase C mediated lipid signaling in abiotic stress tolerance and development in plants
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The phosphoinositide-specific phospholipase C1 modulates flowering time and grain size in rice
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Development and drought escape response in Arabidopsis thaliana are regulated by AtPLC1 in response to abscisic acid
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Silencing of the SlZF-31 gene decreases the salt stress tolerance and drought tolerance of tomato
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Genome-wide identification and characterization of phospholipase C gene family in cotton (Gossypium spp.)
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Phospholipase C activity is increased in wheat seedlings inoculated with the rhizobacteria Azospirillum brasilense Sp245
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India’s Computational Biology Growth and Challenges
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Expression and evolution of the phospholipase C gene family in Brachypodium distachyon
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Genome-wide identification of phospholipase C related to chilling injury in peach fruit
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Regulation of stress-induced inositol metabolism in plants: a phylogenetic search for conserved cis elements
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Genes to genomes to plants*
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Recent insights into cell responses to cold stress in plants: Signaling, defence, and potential functions of phosphatidic acid
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Genome-wide investigation of the phospholipase C gene family in Solanum lycopersicum and abiotic stress analysis
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Differences in membrane lipid homeostasis confer contrast tolerance to low phosphorus in two wheat (Triticum aestivum L.) cultivars
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Genomic and expression analysis indicate the involvement of phospholipase C family in abiotic stress signaling in chickpea (Cicer arietinum)
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Metabolic and physiological functions of Patatin-like phospholipase-A in plants
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GhPIPLC2D promotes cotton fiber elongation by enhancing ethylene biosynthesis
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The rice phosphoinositide-specific phospholipase C3 is involved in responses to osmotic stresses via modulating ROS homeostasis
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Genome wide characterization of phospholipase A & C families and pattern of lysolipids and diacylglycerol changes under abiotic stresses in Brassica napus L
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Phosphatidylinositol pathway-associated genes adjust the rice growth and stress signaling: A global assay of the 5PTase family in the Oryza sativa genome
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Plant phospholipases D and C and their diverse functions in stress responses
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The functions of phospholipases and their hydrolysis products in plant growth, development and stress responses
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Crystal Structure of Fungal Nonspecific Phospholipase C Unveils a Distinct Catalytic Mechanism
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Heterologous expression of the TaPI-PLC1-2B gene enhanced drought and salt tolerance in transgenic rice seedlings
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Multi-trait association study identifies loci associated with tolerance of low phosphorus in Oryza sativa and its wild relatives
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Sequence analysis of the Hsp70 family in moss and evaluation of their functions in abiotic stress responses
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Functional Validation of JcWRKY2 , a Group III Transcription Factor Toward Mitigating Salinity Stress in Transgenic Tobacco
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The Arabidopsis thaliana non-specific phospholipase C2 is involved in the response to Pseudomonas syringae attack
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Comprehensive Expression Analysis of Rice Armadillo Gene Family During Abiotic Stress and Development
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‘Bending’ models of halotropism: incorporating protein phosphatase 2A, ABCB transporters, and auxin metabolism
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A protein phosphatase 2C, AP2C1, interacts with and negatively regulates the function of CIPK9 under potassium-deficient conditions in Arabidopsis
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Rice Non-Specific Phospholipase C6 Is Involved in Mesocotyl Elongation
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Plant PI-PLC signaling in stress and development
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Genome‐wide expressional and functional analysis of calcium transport elements during abiotic stress and development in rice
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Phospholipase C: Diverse functions in plant biotic stress resistance and fungal pathogenicity
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A phosphoinositide‐specific phospholipase C pathway elicits stress‐induced Ca 2+ signals and confers salt tolerance to rice
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Phosphatidylinositol‐hydrolyzing phospholipase C4 modulates rice response to salt and drought
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Evidence that exogenous urea acts as a potent cue to alleviate ammonium‐inhibition of root system growth of cotton plant ( Gossypium hirsutum )
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Azospirillum brasilense Can Modulate Salt Stress in Triticum aestivum via MN052803-LTP Regulation and Phosphatidylcholines Content
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Rice Improvement Through Genome-Based Functional Analysis and Molecular Breeding in India
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Structural, expression and evolutionary analysis of the non-specific phospholipase C gene family in Gossypium hirsutum
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Comparative study of the protein profiles of Sunki mandarin and Rangpur lime plants in response to water deficit
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Heterologous expression of heat stress-responsive AtPLC9 confers heat tolerance in transgenic rice
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Overexpression of OsERF106MZ promotes parental root growth in rice seedlings by relieving the ABA-mediated inhibition of root growth under salinity stress conditions
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Genome-wide characterization and expression profiling of the Phospholipase C (PLC) gene family in three orchids of economic importance
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Analysis of the Citrullus colocynthis Transcriptome during Water Deficit Stress
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Genome-Wide Analysis and Expression Profiling of the Phospholipase C Gene Family in Soybean (Glycine max)
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Transcriptome Analysis of Spartina pectinata in Response to Freezing Stress
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The non-specific phospholipase C of common bean PvNPC4 modulates roots and nodule development
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Understanding drought tolerance in rice by the dissection and genetic analysis of leaf metabolism, oxidative stress status and stomatal behavior
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Transcriptional analyses of Arabidopsis lines overexpressing distinct PLC genes to explore their role in drought tolerance
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Overexpression of a rice phospholipase C gene (OsPLC1) in Arabidopsis thaliana improves salinity stress tolerance
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Plant protein phosphatases 2C: from genomic diversity to functional multiplicity and importance in stress management
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Genome-Wide Investigation of the Phospholipase C Gene Family in Zea mays
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Arabidopsis non-specific phospholipase C1: characterization and its involvement in response to heat stress
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Genomic-Wide Analysis of the PLC Family and Detection of GmPI-PLC7 Responses to Drought and Salt Stresses in Soybean
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Genomics and transcriptomics to protect rice (Oryza sativa. L.) from abiotic stressors: -pathways to achieving zero hunger
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Molecular Characterization Reveals the Involvement of Calcium Dependent Protein Kinases in Abiotic Stress Signaling and Development in Chickpea (Cicer arietinum)
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32Pi Labeled Transgenic Wheat Shows the Accumulation of Phosphatidylinositol 4,5-bisphosphate and Phosphatidic Acid Under Heat and Osmotic Stress
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Mining Aegilops tauschii genetic diversity in the background of bread wheat revealed a novel QTL for seed dormancy
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Genome-wide identification of the PI-PLC gene family in Setaria italica and functional characterization of SiPLC1 in salt stress response
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Genomic and Transcriptomic Approaches to Developing Abiotic Stress-Resilient Crops
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The AP2/ERF Gene Family in Triticum durum: Genome-Wide Identification and Expression Analysis under Drought and Salinity Stresses
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Exploring the Role of TaPLC1-2B in Heat Tolerance at Seedling and Adult Stages of Wheat through Transcriptome Analysis
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Phospholipids in Salt Stress Response
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Arabidopsis Protein Phosphatase PIA1 Impairs Plant Drought Tolerance by Serving as a Common Negative Regulator in ABA Signaling Pathway
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Genome-Wide Identification and Analysis of Phospholipase C Gene Family Reveals Orthologs, Co-Expression Networks, and Expression Profiling Under Abiotic Stress in Sorghum bicolor
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Genome-Wide Identification and Expression Profile Analysis of the Phospholipase C Gene Family in Wheat (Triticum aestivum L.)
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Plant Phospholipases C
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Evolutionary History of Plant Lipolytic Enzymes
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How Phospholipase C Regulates Stress Tolerance and Development in Plants?
inferred← citeshttps://doi.org/10.56764/hpu2.jos.2023.2.3.42-50openalex-snapshot
Identification and characterization of genes encoding phosphoinositide-specific phospholipase C revealed role in drought stress condition in cassava (Manihot esculenta)
inferred← citeshttps://doi.org/10.6084/m9.figshare.13226009openalex-snapshot
Additional file 1 of Heterologous expression of heat stress-responsive AtPLC9 confers heat tolerance in transgenic rice
inferred← citeshttps://doi.org/10.6084/m9.figshare.13226012openalex-snapshot
Additional file 2 of Heterologous expression of heat stress-responsive AtPLC9 confers heat tolerance in transgenic rice
inferred← citeshttps://doi.org/10.6084/m9.figshare.13226015openalex-snapshot
Additional file 3 of Heterologous expression of heat stress-responsive AtPLC9 confers heat tolerance in transgenic rice
inferred← citeshttps://doi.org/10.6084/m9.figshare.13226018openalex-snapshot
Additional file 4 of Heterologous expression of heat stress-responsive AtPLC9 confers heat tolerance in transgenic rice
inferred← citeshttps://doi.org/10.6084/m9.figshare.13226021openalex-snapshot
Additional file 5 of Heterologous expression of heat stress-responsive AtPLC9 confers heat tolerance in transgenic rice
inferred← citeshttps://doi.org/10.6084/m9.figshare.13226024openalex-snapshot
Additional file 6 of Heterologous expression of heat stress-responsive AtPLC9 confers heat tolerance in transgenic rice
inferred← citeshttps://doi.org/10.6084/m9.figshare.13226027openalex-snapshot
Additional file 7 of Heterologous expression of heat stress-responsive AtPLC9 confers heat tolerance in transgenic rice
inferred← citeshttps://doi.org/10.6084/m9.figshare.26575421openalex-snapshot
Additional file 1 of Overexpression of OsERF106MZ promotes parental root growth in rice seedlings by relieving the ABA-mediated inhibition of root growth under salinity stress conditions
inferred← citeshttps://doi.org/10.6084/m9.figshare.26575424openalex-snapshot
Additional file 2 of Overexpression of OsERF106MZ promotes parental root growth in rice seedlings by relieving the ABA-mediated inhibition of root growth under salinity stress conditions
inferred← citeshttps://doi.org/10.6084/m9.figshare.26575427openalex-snapshot
Additional file 3 of Overexpression of OsERF106MZ promotes parental root growth in rice seedlings by relieving the ABA-mediated inhibition of root growth under salinity stress conditions
inferred← citeshttps://doi.org/10.6084/m9.figshare.26575430openalex-snapshot
Additional file 4 of Overexpression of OsERF106MZ promotes parental root growth in rice seedlings by relieving the ABA-mediated inhibition of root growth under salinity stress conditions
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