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Unique Gene Expression Profile of the Proliferating Xenopus Tadpole Tail Blastema Cells Deciphered by RNA-Sequencing Analysis

https://doi.org/10.1371/journal.pone.0111655

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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SINEs

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Translational profiling of cardiomyocytes identifies an early Jak1/Stat3 injury response required for zebrafish heart regeneration

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Xenbase: expansion and updates of the Xenopus model organism database

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Members of the lysyl oxidase family are expressed during the development of the frog Xenopus laevis

inferredcites →https://doi.org/10.1126/science.1117637openalex-snapshot

fgf20 Is Essential for Initiating Zebrafish Fin Regeneration

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Early Cytokine and Chemokine Gene Expression duringPseudomonas aeruginosaCorneal Infection in Mice

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inferredcites →https://doi.org/10.1152/ajpgi.00050.2003openalex-snapshot

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inferredcites →https://doi.org/10.1186/1471-213x-11-70openalex-snapshot

Genome-wide analysis of gene expression during Xenopus tropicalis tadpole tail regeneration

inferredcites →https://doi.org/10.1186/1471-213x-8-66openalex-snapshot

Identification of genes associated with regenerative success of Xenopus laevishindlimbs

inferredcites →https://doi.org/10.1186/1471-2164-14-434openalex-snapshot

De novo transcriptome sequencing of axolotl blastema for identification of differentially expressed genes during limb regeneration

inferredcites →https://doi.org/10.1186/1741-7007-7-1openalex-snapshot

Microarray and cDNA sequence analysis of transcription during nerve-dependent limb regeneration

inferredcites →https://doi.org/10.1186/gb-2009-10-3-r25openalex-snapshot

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

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Cell lineage tracing duringXenopustail regeneration

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What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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HDAC Activity Inhibition Alters Histone H4 Acetylation Dynamics Coupled to HDAC Expression and Lipid Mediator 12(S)HETE Biogenesis in Xenopus laevis Tail Regeneration

inferred← citeshttps://doi.org/10.1002/dvdy.268openalex-snapshot

Tissue disaggregation and isolation of specific cell types from transgenic Xenopus appendages for transcriptional analysis by FACS

inferred← citeshttps://doi.org/10.1002/jmor.21251openalex-snapshot

Appendage regeneration in anamniotes utilizes genes active during larval‐metamorphic stages that have been lost or altered in amniotes: The case for studying lizard tail regeneration

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Macrophages and fibroblasts during inflammation and tissue repair in models of organ regeneration

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Communication in Neural Circuits: Tools, Opportunities, and Challenges

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inferred← citeshttps://doi.org/10.1038/s41467-017-00594-5openalex-snapshot

interleukin-11 induces and maintains progenitors of different cell lineages during Xenopus tadpole tail regeneration

inferred← citeshttps://doi.org/10.1038/s41467-018-06614-2openalex-snapshot

Early redox activities modulate Xenopus tail regeneration

inferred← citeshttps://doi.org/10.1038/s41467-024-50865-1openalex-snapshot

SoxC and MmpReg promote blastema formation in whole-body regeneration of fragmenting potworms Enchytraeus japonensis

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Xenopus laevis il11ra.L is an experimentally proven interleukin-11 receptor component that is required for tadpole tail regeneration

inferred← citeshttps://doi.org/10.1073/pnas.2504410122openalex-snapshot

Putative muscle stem cells promote Xenopus tail regeneration by modifying macrophage function via c1qtnf3

inferred← citeshttps://doi.org/10.1098/rspb.2019.2939openalex-snapshot

Salamander-like tail regeneration in the West African lungfish

inferred← citeshttps://doi.org/10.1101/2020.02.05.936294openalex-snapshot

Epigenetic immune-modulation by Histone Deacetylase Activity (HDAC) of tissue and organ regeneration in Xenopus laevis

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Decoding Phenotypic Variability in Osteogenesis Imperfecta: Zebrafish as a Model for Molecular and Ultrastructural Insights

inferred← citeshttps://doi.org/10.1111/dgd.12795openalex-snapshot

Cellular responses in the FGF10 ‐mediated improvement of hindlimb regenerative capacity in Xenopus laevis revealed by single‐cell transcriptomics

inferred← citeshttps://doi.org/10.1111/dgd.12797openalex-snapshot

Effective enrichment of stem cells in regenerating Xenopus laevis tadpole tails using the side population method

inferred← citeshttps://doi.org/10.1186/s13100-025-00356-xopenalex-snapshot

Impact of a horizontally transferred Helitron family on genome evolution in Xenopus laevis

inferred← citeshttps://doi.org/10.1242/dev.200467openalex-snapshot

regeneration factors expressed on myeloid expression in macrophage-like cells is required for tail regeneration in Xenopus laevis tadpoles

inferred← citeshttps://doi.org/10.3389/fphys.2019.00081openalex-snapshot

More Than Just a Bandage: Closing the Gap Between Injury and Appendage Regeneration

inferred← citeshttps://doi.org/10.3390/ijms19113390openalex-snapshot

Calcium Signaling in Vertebrate Development and Its Role in Disease

inferred← citeshttps://doi.org/10.3390/ijms252111597openalex-snapshot

Tail Tales: What We Have Learned About Regeneration from Xenopus Laevis Tadpoles

inferred← citeshttps://doi.org/10.7554/elife.52648openalex-snapshot

Chromatin accessibility dynamics and single cell RNA-Seq reveal new regulators of regeneration in neural progenitors

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