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Property Graph vs RDF Triple Store: A Comparison on Glycan Substructure Search

https://doi.org/10.1371/journal.pone.0144578
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/chin.200307266openalex-snapshot
International Union of Pure and Applied Chemistry and International Union of Biochemistry and Molecular Biology: Joint Commission on Biochemical Nomenclature: Nomenclature of Carbohydrates
inferredcites →https://doi.org/10.1002/pmic.200900708openalex-snapshot
Symbol nomenclature for glycan representation
inferredcites →https://doi.org/10.1007/3-540-48005-6_7openalex-snapshot
Sesame: A Generic Architecture for Storing and Querying RDF and RDF Schema
inferredcites →https://doi.org/10.1007/978-3-540-76298-0_52openalex-snapshot
DBpedia: A Nucleus for a Web of Open Data
inferredcites →https://doi.org/10.1007/978-3-642-02184-8openalex-snapshot
Networked Knowledge - Networked Media
inferredcites →https://doi.org/10.1007/978-3-642-02184-8_2openalex-snapshot
RDF Support in the Virtuoso DBMS
inferredcites →https://doi.org/10.1007/978-4-431-77922-3openalex-snapshot
Experimental Glycoscience
inferredcites →https://doi.org/10.1007/978-4-431-77922-3_104openalex-snapshot
GlycoEpitope: A Database of Carbohydrate Epitopes and Antibodies
inferredcites →https://doi.org/10.1007/bf01049370openalex-snapshot
IUPAC-IUB Joint Commission on Biochemical Nomenclature (JCBN). Nomenclature of glycoproteins, glycopeptides and peptidoglycans
inferredcites →https://doi.org/10.1016/j.carres.2005.09.019openalex-snapshot
GLYDE—an expressive XML standard for the representation of glycan structure
inferredcites →https://doi.org/10.1016/j.carres.2008.03.011openalex-snapshot
GlycoCT—a unifying sequence format for carbohydrates
inferredcites →https://doi.org/10.1016/j.jprot.2015.06.013openalex-snapshot
MzJava: An open source library for mass spectrometry data processing
inferredcites →https://doi.org/10.1016/s0008-6215(97)83449-0openalex-snapshot
Nomenclature of carbohydrates
inferredcites →https://doi.org/10.1016/s0962-8924(00)01855-9openalex-snapshot
Essentials of Glycobiology
inferredcites →https://doi.org/10.1021/ci400571eopenalex-snapshot
WURCS: The Web3 Unique Representation of Carbohydrate Structures
inferredcites →https://doi.org/10.1039/b907931aopenalex-snapshot
The repertoire of glycan determinants in the human glycome
inferredcites →https://doi.org/10.1093/bioinformatics/btu732openalex-snapshot
GlycoRDF: an ontology to standardize glycomics data in RDF
inferredcites →https://doi.org/10.1093/glycob/2.6.505openalex-snapshot
Letter to the Glyco-Forum
inferredcites →https://doi.org/10.1093/glycob/cwq188openalex-snapshot
EUROCarbDB: An open-access platform for glycoinformatics
inferredcites →https://doi.org/10.1093/nar/gkh473openalex-snapshot
KCaM (KEGG Carbohydrate Matcher): a software tool for analyzing the structures of carbohydrate sugar chains
inferredcites →https://doi.org/10.1093/nar/gkq1014openalex-snapshot
GlycomeDB--a unified database for carbohydrate structures
inferredcites →https://doi.org/10.1093/nar/gkt1128openalex-snapshot
UniCarbKB: building a knowledge platform for glycoproteomics
inferredcites →https://doi.org/10.1093/nar/gku989openalex-snapshot
UniProt: a hub for protein information
inferredcites →https://doi.org/10.1093/nar/gkv840openalex-snapshot
Carbohydrate structure database merged from bacterial, archaeal, plant and fungal parts
inferredcites →https://doi.org/10.1111/j.1432-1033.1986.tb09825.xopenalex-snapshot
Nomenclature of glycoproteins, glycopeptides and peptidoglycans
inferredcites →https://doi.org/10.1145/2457317.2457351openalex-snapshot
Performance of graph query languages
inferredcites →https://doi.org/10.1145/2484425openalex-snapshot
First International Workshop on Graph Data Management Experiences and Systems
inferredcites →https://doi.org/10.1145/2484425.2484440openalex-snapshot
Benchmarking database systems for social network applications
inferredcites →https://doi.org/10.1186/1471-2105-15-s1-s9openalex-snapshot
Toolboxes for a standardised and systematic study of glycans
inferredcites →https://doi.org/10.1186/1752-0509-7-s6-s2openalex-snapshot
KCF-S: KEGG Chemical Function and Substructure for improved interpretability and prediction in chemical bioinformatics
inferredcites →https://doi.org/10.1186/2041-1480-4-39openalex-snapshot
Introducing glycomics data into the Semantic Web

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.5281/zenodo.4033382openalex-extracted
inferred← citeshttps://doi.org/10.1007/978-1-4939-6783-4_7openalex-snapshot
Navigating the Glycome Space and Connecting the Glycoproteome
inferred← citeshttps://doi.org/10.1007/978-3-030-06170-8_7openalex-snapshot
Artificial Intelligence and Bioinformatics
inferred← citeshttps://doi.org/10.1007/978-3-030-62466-8_11openalex-snapshot
G2GML: Graph to Graph Mapping Language for Bridging RDF and Property Graphs
inferred← citeshttps://doi.org/10.1007/978-3-031-47240-4_15openalex-snapshot
Comparison of Knowledge Graph Representations for Consumer Scenarios
inferred← citeshttps://doi.org/10.1007/978-3-032-09527-5_26openalex-snapshot
Measuring the Impact of Narrative Complexity on Knowledge Graph Embeddings
inferred← citeshttps://doi.org/10.1007/978-4-431-56454-6_2openalex-snapshot
Development of Carbohydrate Nomenclature and Representation
inferred← citeshttps://doi.org/10.1007/978-981-10-6544-6_15openalex-snapshot
A System Architecture for Mapping Application Data into Complex Graph
inferred← citeshttps://doi.org/10.1007/s00203-025-04413-0openalex-snapshot
Microbiome knowledge graph as a tool to understand bacteria-host associations
inferred← citeshttps://doi.org/10.1007/s10257-022-00555-6openalex-snapshot
A proposal for future data organization in enterprise systems—an analysis of established database approaches
inferred← citeshttps://doi.org/10.1007/s12369-025-01335-1openalex-snapshot
KG-Retailbot: A Knowledge Graph-Based Chatbot for Explaining Robotic Scenario Information in a Retail Setting
inferred← citeshttps://doi.org/10.1007/s41019-021-00174-0openalex-snapshot
A Unification of Heterogeneous Data Sources into a Graph Model in E-commerce
inferred← citeshttps://doi.org/10.1016/b978-0-12-819475-1.00107-3openalex-snapshot
Glycoinformatics Resources Integrated Through the GlySpace Alliance
inferred← citeshttps://doi.org/10.1016/b978-0-443-29808-0.00044-3openalex-snapshot
Accelerating early-stage drug discovery with knowledge graphs
inferred← citeshttps://doi.org/10.1016/j.autcon.2025.106034openalex-snapshot
Releasing the power of graph for building information discovery
inferred← citeshttps://doi.org/10.1016/j.autcon.2026.106854openalex-snapshot
Comparative evaluation of resource description framework and labeled property graphs for BIM-based early design decisions
inferred← citeshttps://doi.org/10.1016/j.autcon.2026.107026openalex-snapshot
Semantic Digital Thread framework for explainable lifecycle carbon management: An ontology-driven and auditable automation backbone
inferred← citeshttps://doi.org/10.1016/j.compenvurbsys.2022.101884openalex-snapshot
Performance benchmark on semantic web repositories for spatially explicit knowledge graph applications
inferred← citeshttps://doi.org/10.1016/j.jag.2025.104437openalex-snapshot
An integrated graph-spatial method for high-performance geospatial-temporal semantic query
inferred← citeshttps://doi.org/10.1021/acs.jproteome.9b00367openalex-snapshot
glypy: An Open Source Glycoinformatics Library
inferred← citeshttps://doi.org/10.1038/s40494-026-02779-yopenalex-snapshot
A multi-representation knowledge graph approach for preserving and reasoning over Ming-style furniture
inferred← citeshttps://doi.org/10.1038/s41597-024-03673-7openalex-snapshot
An ontology-based knowledge graph for representing interactions involving RNA molecules
inferred← citeshttps://doi.org/10.1038/s41597-025-05276-2openalex-snapshot
An epidemiological knowledge graph extracted from the World Health Organization’s Disease Outbreak News
inferred← citeshttps://doi.org/10.1074/mcp.ra118.000799openalex-snapshot
Glycomics@ExPASy: Bridging the Gap
inferred← citeshttps://doi.org/10.1080/10095020.2026.2690705openalex-snapshot
3D asset management graph analytics for proactive maintenance: a spatio-temporal graph modeling approach
inferred← citeshttps://doi.org/10.1088/1742-6596/3224/6/062044openalex-snapshot
Accelerating the Adoption of Knowledge Graphs for Cross-Disciplinary Collaboration in Wind Energy
inferred← citeshttps://doi.org/10.1093/bioinformatics/btac500openalex-snapshot
This is GlycoQL
inferred← citeshttps://doi.org/10.1093/bioinformatics/bty319openalex-snapshot
GlycoStore: a database of retention properties for glycan analysis
inferred← citeshttps://doi.org/10.1093/glycob/cwab013openalex-snapshot
The glycoconjugate ontology (GlycoCoO) for standardizing the annotation of glycoconjugate data and its application
inferred← citeshttps://doi.org/10.1093/glycob/cwy019openalex-snapshot
Understanding the glycome: an interactive view of glycosylation from glycocompositions to glycoepitopes
inferred← citeshttps://doi.org/10.1093/glycob/cwy084openalex-snapshot
A pipeline to translate glycosaminoglycan sequences into 3D models. Application to the exploration of glycosaminoglycan conformational space
inferred← citeshttps://doi.org/10.1093/nar/gkv1247openalex-snapshot
SugarBindDB, a resource of glycan-mediated host–pathogen interactions
inferred← citeshttps://doi.org/10.1109/access.2020.2993117openalex-snapshot
Mapping RDF Databases to Property Graph Databases
inferred← citeshttps://doi.org/10.1109/access.2021.3070395openalex-snapshot
Knowledge Graphs in Manufacturing and Production: A Systematic Literature Review
inferred← citeshttps://doi.org/10.1109/aeect69724.2026.11657875openalex-snapshot
Graph Database Systems & Graph-Native Processing for Biological Network Analysis
inferred← citeshttps://doi.org/10.1109/icic64337.2024.10956466openalex-snapshot
Data Warehouse Model for Outcome-based Education Curriculum based on Labeled Property Graph
inferred← citeshttps://doi.org/10.1109/ickg59574.2023.00008openalex-snapshot
Generation of New Bilingual Dictionaries Through Inference Techniques Supported by a Graph Oriented Database Management System
inferred← citeshttps://doi.org/10.1109/incip64058.2025.11019821openalex-snapshot
Enhancing Cloud Security: An Ontology-Based NIDS with Semantic Technologies for VM Attack Detection
inferred← citeshttps://doi.org/10.1109/snams.2019.8931838openalex-snapshot
Leveraging Graph Models to Design Acute Kidney Injury Disease Research Data Warehouse
inferred← citeshttps://doi.org/10.1109/sose62659.2024.10620964openalex-snapshot
Graph-based Parameter Management for Configuration Controlled Multi-level Modeling of Cyber-physical Systems
inferred← citeshttps://doi.org/10.1109/tifs.2024.3396390openalex-snapshot
MEGR-APT: A Memory-Efficient APT Hunting System Based on Attack Representation Learning
inferred← citeshttps://doi.org/10.1109/tkde.2019.2891565openalex-snapshot
ChronoGraph: Enabling Temporal Graph Traversals for Efficient Information Diffusion Analysis over Time
inferred← citeshttps://doi.org/10.1109/tkde.2020.3005672openalex-snapshot
Enabling Time-Centric Computation for Efficient Temporal Graph Traversals From Multiple Sources
inferred← citeshttps://doi.org/10.1145/3183713.3190657openalex-snapshot
Cypher
inferred← citeshttps://doi.org/10.1162/dint_a_00096openalex-snapshot
Integrated “Generate, Make, and Test” for Formulated Products using Knowledge Graphs
inferred← citeshttps://doi.org/10.1371/journal.pone.0179130openalex-snapshot
biochem4j: Integrated and extensible biochemical knowledge through graph databases
inferred← citeshttps://doi.org/10.1371/journal.pone.0191917openalex-snapshot
Reducing vertices in property graphs
inferred← citeshttps://doi.org/10.1371/journal.pone.0269497openalex-snapshot
A semantics, energy-based approach to automate biomodel composition
inferred← citeshttps://doi.org/10.15265/iy-2016-022openalex-snapshot
Knowledge Representation and Management: a Linked Data Perspective
inferred← citeshttps://doi.org/10.17219/acem/70795openalex-snapshot
PIK3CA mutation in gastric cancer and the role of microsatellite instability status in mutations of exons 9 and 20 of the PIK3CA gene
inferred← citeshttps://doi.org/10.3233/sw-210444openalex-snapshot
Representing COVID-19 information in collaborative knowledge graphs: The case of Wikidata
inferred← citeshttps://doi.org/10.3390/app131810497openalex-snapshot
A Knowledge Graph Framework for Dementia Research Data
inferred← citeshttps://doi.org/10.3390/app142311171openalex-snapshot
Integration of BIM and GIS for the Digitization of the Built Environment
inferred← citeshttps://doi.org/10.3390/buildings12122162openalex-snapshot
The Application of Graph in BIM/GIS Integration
inferred← citeshttps://doi.org/10.3390/buildings14103041openalex-snapshot
PageRank Algorithm-Based Recommendation System for Construction Safety Guidelines
inferred← citeshttps://doi.org/10.3390/buildings15101722openalex-snapshot
Dynamic Multi-Model Container Framework for Cloud-Based Distributed Digital Twins (dDTws)
inferred← citeshttps://doi.org/10.3390/buildings16040685openalex-snapshot
Evaluation of Building Design Variants in Early Phases on the Basis of Adaptive Detailing Strategies
inferred← citeshttps://doi.org/10.3390/e19010030openalex-snapshot
Comparing Relational and Ontological Triple Stores in Healthcare Domain
inferred← citeshttps://doi.org/10.3390/molecules27010065openalex-snapshot
Dealing with the Ambiguity of Glycan Substructure Search
inferred← citeshttps://doi.org/10.3390/v11040374openalex-snapshot
A Bioinformatics View of Glycan–Virus Interactions
inferred← citeshttps://doi.org/10.3762/bjoc.16.215openalex-snapshot
A consensus-based and readable extension of Li near Co de for R eaction R ules (LiCoRR)
inferred← citeshttps://doi.org/10.4018/ijisscm.2022010104openalex-snapshot
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inferred← citeshttps://doi.org/10.53846/goediss-7554openalex-snapshot
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inferred← citeshttps://doi.org/10.70675/126d9b74z4f1cz4773z8da9z3b8080b47612openalex-snapshot
Collaborative systems for large-scale online citizen participation
inferred← citeshttps://doi.org/10.70675/e78139f1z6c9bz45d3z8957z90a81b8ab70fopenalex-snapshot
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