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Role of CsrA in stress responses and metabolism important for Salmonella virulence revealed by integrated transcriptomics
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Outgoing claims: the papers this work cites, builds on, or argues with.
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Salmonella effector proteins and host-cell responses
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Thioredoxins in bacteria: functions in oxidative stress response and regulation of thioredoxin genes
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Iron supplying systems of Salmonella in diagnostics, epidemiology and infection
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The multifaceted capacity of Dps proteins to combat bacterial stress conditions: Detoxification of iron and hydrogen peroxide and DNA binding
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The Escherichia coli btuE gene, encodes a glutathione peroxidase that is induced under oxidative stress conditions
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Iron metabolism at the host pathogen interface: Lipocalin 2 and the pathogen-associated iroA gene cluster
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Salmonella Disrupts Host Endocytic Trafficking by SopD2-Mediated Inhibition of Rab7
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Probiotic Bacteria Reduce Salmonella Typhimurium Intestinal Colonization by Competing for Iron
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An Infection-Relevant Transcriptomic Compendium for Salmonella enterica Serovar Typhimurium
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Depletion of Butyrate-Producing Clostridia from the Gut Microbiota Drives an Aerobic Luminal Expansion of Salmonella
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Bacterial Stress Responses during Host Infection
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Salmonella SPI-2 Type III Secretion System Effectors: Molecular Mechanisms And Physiological Consequences
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Dysbiosis-Associated Change in Host Metabolism Generates Lactate to Support Salmonella Growth
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Dysbiosis-Associated Change in Host Metabolism Generates Lactate to Support Salmonella Growth
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Evolution of pathogenicity islands of Salmonella enterica
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Molecular Geometry of CsrA (RsmA) Binding to RNA and Its Implications for Regulated Expression
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Adaptation to the host environment: regulation of the SPI1 type III secretion system in Salmonella enterica serovar Typhimurium
inferredcites →https://doi.org/10.1016/j.mib.2008.01.002openalex-snapshot
The Salmonella-containing vacuole—Moving with the times
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Control of Salmonella pathogenicity island-2 gene expression
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Burden and aetiology of diarrhoeal disease in infants and young children in developing countries (the Global Enteric Multicenter Study, GEMS): a prospective, case-control study
inferredcites →https://doi.org/10.1016/s1286-4579(00)00273-2openalex-snapshot
pathogenicity islands: big virulence in small packages
inferredcites →https://doi.org/10.1021/acs.jafc.7b04237openalex-snapshot
Measurement of Fructose–Asparagine Concentrations in Human and Animal Foods
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SopD2 is a Novel Type III Secreted Effector of Salmonella typhimurium That Targets Late Endocytic Compartments Upon Delivery Into Host Cells
inferredcites →https://doi.org/10.1038/emboj.2013.206openalex-snapshot
A novel CsrA titration mechanism regulates fimbrial gene expression in Salmonella typhimurium
inferredcites →https://doi.org/10.1038/nature18597openalex-snapshot
Host-mediated sugar oxidation promotes post-antibiotic pathogen expansion
inferredcites →https://doi.org/10.1038/nmeth.1923openalex-snapshot
Fast gapped-read alignment with Bowtie 2
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The ribosome profiling strategy for monitoring translation in vivo by deep sequencing of ribosome-protected mRNA fragments
inferredcites →https://doi.org/10.1038/nprot.2013.133openalex-snapshot
Selective ribosome profiling as a tool for studying the interaction of chaperones and targeting factors with nascent polypeptide chains and ribosomes
inferredcites →https://doi.org/10.1038/nrg3645openalex-snapshot
Ribosome profiling: new views of translation, from single codons to genome scale
inferredcites →https://doi.org/10.1038/nrmicro1788openalex-snapshot
Salmonellae interplay with host cells
inferredcites →https://doi.org/10.1038/nrmicro2836openalex-snapshot
Nutritional immunity: transition metals at the pathogen–host interface
inferredcites →https://doi.org/10.1038/nrmicro3420openalex-snapshot
Salmonellae interactions with host processes
inferredcites →https://doi.org/10.1038/s41467-017-01613-1openalex-snapshot
Global role of the bacterial post-transcriptional regulator CsrA revealed by integrated transcriptomics
inferredcites →https://doi.org/10.1038/srep25057openalex-snapshot
The Csr system regulates genome-wide mRNA stability and transcription and thus gene expression in Escherichia coli
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Membrane cyclopropane fatty acid content is a major factor in acid resistance of Escherichia coli
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Unravelling the biology of macrophage infection by gene expression profiling of intracellular Salmonella enterica
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AraC/XylS family members, HilD and HilC, directly activate virulence gene expression independently of HilA in Salmonella typhimurium
inferredcites →https://doi.org/10.1046/j.1365-2958.2003.03535.xopenalex-snapshot
Global regulation by CsrA in Salmonella typhimurium
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Regulatory components, including integration host factor, CysB and H‐NS, that influence pH responses in Escherichia coli
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HilD-mediated transcriptional cross-talk between SPI-1 and SPI-2
inferredcites →https://doi.org/10.1073/pnas.0807071106openalex-snapshot
A dual-signal regulatory circuit activates transcription of a set of divergent operons in Salmonella typhimurium
inferredcites →https://doi.org/10.1073/pnas.1107857108openalex-snapshot
Intestinal inflammation allows Salmonella to use ethanolamine to compete with the microbiota
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Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays
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One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
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Trehalose synthesis is induced upon exposure of Escherichia coli to cold and is essential for viability at low temperatures
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Cloning and molecular characterization of genes whose products allow Salmonella typhimurium to penetrate tissue culture cells.
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The alternative sigma factor katF (rpoS) regulates Salmonella virulence.
inferredcites →https://doi.org/10.1073/pnas.89.5.1847openalex-snapshot
Identification of a Salmonella typhimurium invasion locus by selection for hyperinvasive mutants.
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Identification of a virulence locus encoding a second type III secretion system in Salmonella typhimurium.
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Global Iron-dependent Gene Regulation in Escherichia coli
inferredcites →https://doi.org/10.1074/jbc.m709843200openalex-snapshot
Overcoming H-NS-mediated Transcriptional Silencing of Horizontally Acquired Genes by the PhoP and SlyA Proteins in Salmonella enterica
inferredcites →https://doi.org/10.1084/jem.180.1.15openalex-snapshot
Salmonella typhimurium initiates murine infection by penetrating and destroying the specialized epithelial M cells of the Peyer's patches.
inferredcites →https://doi.org/10.1093/bioinformatics/btl140openalex-snapshot
Improved scoring of functional groups from gene expression data by decorrelating GO graph structure
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HTSeq—a Python framework to work with high-throughput sequencing data
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Mfold web server for nucleic acid folding and hybridization prediction
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Degradation of RNA in bacteria: comparison of mRNA and stable RNA
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High-throughput functional annotation and data mining with the Blast2GO suite
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A sequence-based approach for prediction of CsrA/RsmA targets in bacteria with experimental validation in Pseudomonas aeruginosa
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Why weight? Modelling sample and observational level variability improves power in RNA-seq analyses
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Antagonistic control of the turnover pathway for the global regulatory sRNA CsrB by the CsrA and CsrD proteins
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Estimates of Illnesses, Hospitalizations and Deaths Caused by Major Bacterial Enteric Pathogens in Young Children in the United States
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Regulation of the spvR gene of the Salmonella typhimurium virulence plasmid during exponential-phase growth in intracellular salts medium and at stationary phase in L broth
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Salmonella spp. survival strategies within the host gastrointestinal tract
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Lost in translation: the influence of ribosomes on bacterial mRNA decay: Figure 1.
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Identification of a novel regulatory protein (CsrD) that targets the global regulatory RNAs CsrB and CsrC for degradation by RNase E
inferredcites →https://doi.org/10.1101/gad.214734.113openalex-snapshot
Dual function of the McaS small RNA in controlling biofilm formation
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hilA is a novel ompR/toxR family member that activates the expression of Salmonella typhimurium invasion genes
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Co‐regulation of Salmonella enterica genes required for virulence and resistance to antimicrobial peptides by SlyA and PhoP/PhoQ
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The role of ferritins in the physiology of Salmonella enterica sv. Typhimurium: a unique role for ferritin B in iron‐sulphur cluster repair and virulence
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The response regulator SsrB activates expression of diverse Salmonella pathogenicity island 2 promoters and counters silencing by the nucleoid‐associated protein H‐NS
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Circuitry linking the Csr and stringent response global regulatory systems
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Integration of a complex regulatory cascade involving the SirA/BarA and Csr global regulatory systems that controls expression of the Salmonella SPI‐1 and SPI‐2 virulence regulons through HilD
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Complex regulatory network encompassing the Csr, c‐di‐GMP and motility systems of Salmonella Typhimurium
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Post‐transcriptional regulation on a global scale: form and function of Csr/Rsm systems
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Manipulating cellular transport and immune responses: dynamic interactions between intracellular Salmonella enterica and its host cells
inferredcites →https://doi.org/10.1111/j.1574-6968.2009.01661.xopenalex-snapshot
TheEscherichia coliCsrB and CsrC small RNAs are strongly induced during growth in nutrient-poor medium
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Glutathione transferases in bacteria
inferredcites →https://doi.org/10.1111/mmi.12136openalex-snapshot
CsrA activates flhDC expression by protecting flhDC m RNA from RN ase E ‐mediated cleavage
inferredcites →https://doi.org/10.1111/mmi.13259openalex-snapshot
Regulation of CsrB/C sRNA decay by EIIA Glc of the phosphoenolpyruvate: carbohydrate phosphotransferase system
inferredcites →https://doi.org/10.1111/mmi.13702openalex-snapshot
Alternative pathways for Escherichia coli biofilm formation revealed by sRNA overproduction
inferredcites →https://doi.org/10.1126/science.1189000openalex-snapshot
pH Sensing by Intracellular Salmonella Induces Effector Translocation
inferredcites →https://doi.org/10.1126/science.aah4886openalex-snapshot
Host cell attachment elicits posttranscriptional regulation in infecting enteropathogenic bacteria
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Cyclopropane ring formation in membrane lipids of bacteria
inferredcites →https://doi.org/10.1128/aem.00515-13openalex-snapshot
ProP Is Required for the Survival of Desiccated Salmonella enterica Serovar Typhimurium Cells on a Stainless Steel Surface
inferredcites →https://doi.org/10.1128/aem.02172-15openalex-snapshot
Global Transcriptome and Mutagenic Analyses of the Acid Tolerance Response of Salmonella enterica Serovar Typhimurium
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Timing of Induction of Osmotically Controlled Genes in Salmonella enterica Serovar Typhimurium, Determined with Quantitative Real-Time Reverse Transcription-PCR
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Enhanced Trehalose Production Improves Growth of Escherichia coli under Osmotic Stress
inferredcites →https://doi.org/10.1128/cmr.00066-12openalex-snapshot
Salmonella enterica Serovar Typhimurium Skills To Succeed in the Host: Virulence and Regulation
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The Aerobic and Anaerobic Respiratory Chain of Escherichia coli and Salmonella enterica : Enzymes and Energetics
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The Aerobic and Anaerobic Respiratory Chain of Escherichia coli and Salmonella enterica : Enzymes and Energetics
inferredcites →https://doi.org/10.1128/iai.00351-15openalex-snapshot
The Periplasmic Nitrate Reductase NapABC Supports Luminal Growth of Salmonella enterica Serovar Typhimurium during Colitis
inferredcites →https://doi.org/10.1128/iai.00771-10openalex-snapshot
Discovery of Novel Secreted Virulence Factors from Salmonella enterica Serovar Typhimurium by Proteomic Analysis of Culture Supernatants
inferredcites →https://doi.org/10.1128/iai.00931-09openalex-snapshot
Systematic Analysis of the SsrAB Virulon of Salmonella enterica
inferredcites →https://doi.org/10.1128/iai.00945-17openalex-snapshot
Salmonella-Mediated Inflammation Eliminates Competitors for Fructose-Asparagine in the Gut
inferredcites →https://doi.org/10.1128/iai.01231-10openalex-snapshot
Role of Salmonella Pathogenicity Island 1 Protein IacP in Salmonella enterica Serovar Typhimurium Pathogenesis
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Expression of Salmonella typhimurium rpoS and rpoS-dependent genes in the intracellular environment of eukaryotic cells
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The gene slyA of Salmonella typhimurium is required for destruction of M cells and intracellular survival but not for invasion or colonization of the murine small intestine
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Acidification of phagosomes containing Salmonella typhimurium in murine macrophages
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Role of sigma factor RpoS in initial stages of Salmonella typhimurium infection
inferredcites →https://doi.org/10.1128/iai.65.9.3725-3730.1997openalex-snapshot
SlyA, a transcriptional regulator of Salmonella typhimurium, is required for resistance to oxidative stress and is expressed in the intracellular environment of macrophages
inferredcites →https://doi.org/10.1128/iai.68.12.6790-6797.2000openalex-snapshot
Regulation of Salmonella enterica Serovar Typhimurium Invasion Genes by csrA
inferredcites →https://doi.org/10.1128/iai.73.7.4354-4362.2005openalex-snapshot
SlyA Regulates Function of Salmonella Pathogenicity Island 2 (SPI-2) and Expression of SPI-2-Associated Genes
inferredcites →https://doi.org/10.1128/jb.00104-13openalex-snapshot
Low-pH Rescue of Acid-Sensitive Salmonella enterica Serovar Typhi Strains by a Rhamnose-Regulated Arginine Decarboxylase System
inferredcites →https://doi.org/10.1128/jb.00144-09openalex-snapshot
Redundant Hydrogen Peroxide Scavengers Contribute to Salmonella Virulence and Oxidative Stress Resistance
inferredcites →https://doi.org/10.1128/jb.00205-08openalex-snapshot
Formate Acts as a Diffusible Signal To InduceSalmonellaInvasion
inferredcites →https://doi.org/10.1128/jb.00529-07openalex-snapshot
CsrA Inhibits Translation Initiation of Escherichia coli hfq by Binding to a Single Site Overlapping the Shine-Dalgarno Sequence
inferredcites →https://doi.org/10.1128/jb.00721-15openalex-snapshot
CsrA Participates in a PNPase Autoregulatory Mechanism by Selectively Repressing Translation of pnp Transcripts That Have Been Previously Processed by RNase III and PNPase
inferredcites →https://doi.org/10.1128/jb.01685-09openalex-snapshot
The Physiological Stimulus for the BarA Sensor Kinase
inferredcites →https://doi.org/10.1128/jb.01799-14openalex-snapshot
HilD Induces Expression of Salmonella Pathogenicity Island 2 Genes by Displacing the Global Negative Regulator H-NS from ssrAB
inferredcites →https://doi.org/10.1128/jb.174.11.3637-3644.1992openalex-snapshot
osmY, a new hyperosmotically inducible gene, encodes a periplasmic protein in Escherichia coli
inferredcites →https://doi.org/10.1128/jb.175.15.4744-4755.1993openalex-snapshot
Identification and molecular characterization of csrA, a pleiotropic gene from Escherichia coli that affects glycogen biosynthesis, gluconeogenesis, cell size, and surface properties
inferredcites →https://doi.org/10.1128/jb.176.22.7017-7023.1994openalex-snapshot
Effects of rpoA and cysB mutations on acid induction of biodegradative arginine decarboxylase in Escherichia coli
inferredcites →https://doi.org/10.1128/jb.176.6.1695-1701.1994openalex-snapshot
Effects of nitrate respiration on expression of the Arc-controlled operons encoding succinate dehydrogenase and flavin-linked L-lactate dehydrogenase
inferredcites →https://doi.org/10.1128/jb.182.1.23-29.2000openalex-snapshot
Identification of SoxS-Regulated Genes in Salmonella enterica Serovar Typhimurium
inferredcites →https://doi.org/10.1128/jb.182.7.1872-1882.2000openalex-snapshot
Multiple Factors Independently RegulatehilAand Invasion Gene Expression inSalmonella entericaSerovar Typhimurium
inferredcites →https://doi.org/10.1128/mbio.00143-12openalex-snapshot
Phage-Mediated Acquisition of a Type III Secreted Effector Protein Boosts Growth of Salmonella by Nitrate Respiration
inferredcites →https://doi.org/10.1128/mbio.00960-16openalex-snapshot
Energy Taxis toward Host-Derived Nitrate Supports a Salmonella Pathogenicity Island 1-Independent Mechanism of Invasion
inferredcites →https://doi.org/10.1128/mbio.01727-14openalex-snapshot
A Horizontally Acquired Transcription Factor Coordinates Salmonella Adaptations to Host Microenvironments
inferredcites →https://doi.org/10.1128/mbio.02052-16openalex-snapshot
Cytochrome bd -Dependent Bioenergetics and Antinitrosative Defenses in Salmonella Pathogenesis
inferredcites →https://doi.org/10.1128/mmbr.00052-14openalex-snapshot
Regulation of Bacterial Virulence by Csr (Rsm) Systems
inferredcites →https://doi.org/10.1136/gutjnl-2014-307720openalex-snapshot
Iron fortification adversely affects the gut microbiome, increases pathogen abundance and induces intestinal inflammation in Kenyan infants
inferredcites →https://doi.org/10.1146/annurev-micro-091014-104108openalex-snapshot
The Pyromaniac Inside You: Salmonella Metabolism in the Host Gut
inferredcites →https://doi.org/10.1146/annurev-micro-092412-155725openalex-snapshot
Bacterial Type III Secretion Systems: Specialized Nanomachines for Protein Delivery into Target Cells
inferredcites →https://doi.org/10.1186/1471-2180-11-236openalex-snapshot
The Fur regulon in anaerobically grown Salmonella enterica sv. Typhimurium: identification of new Fur targets
inferredcites →https://doi.org/10.1186/1475-2859-11-79openalex-snapshot
Manipulation of the carbon storage regulator system for metabolite remodeling and biofuel production in Escherichia coli
inferredcites →https://doi.org/10.1186/gb-2009-10-3-r25openalex-snapshot
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
inferredcites →https://doi.org/10.1186/gb-2012-13-4-r30openalex-snapshot
Global mRNA decay analysis at single nucleotide resolution reveals segmental and positional degradation patterns in a Gram-positive bacterium
inferredcites →https://doi.org/10.1186/s12864-015-1482-8openalex-snapshot
Genome-wide investigation of mRNA lifetime determinants in Escherichia coli cells cultured at different growth rates
inferredcites →https://doi.org/10.1371/journal.pbio.0050244openalex-snapshot
Salmonella enterica Serovar Typhimurium Exploits Inflammation to Compete with the Intestinal Microbiota
inferredcites →https://doi.org/10.1371/journal.pbio.1002116openalex-snapshot
A FRET-Based DNA Biosensor Tracks OmpR-Dependent Acidification of Salmonella during Macrophage Infection
inferredcites →https://doi.org/10.1371/journal.pgen.1006556openalex-snapshot
Acylation of the Type 3 Secretion System Translocon Using a Dedicated Acyl Carrier Protein
inferredcites →https://doi.org/10.1371/journal.pmed.1001921openalex-snapshot
World Health Organization Estimates of the Global and Regional Disease Burden of 22 Foodborne Bacterial, Protozoal, and Viral Diseases, 2010: A Data Synthesis
inferredcites →https://doi.org/10.1371/journal.pone.0015466openalex-snapshot
Cationic Amino Acid Transporters and Salmonella Typhimurium ArgT Collectively Regulate Arginine Availability towards Intracellular Salmonella Growth
inferredcites →https://doi.org/10.1371/journal.pone.0021800openalex-snapshot
REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms
inferredcites →https://doi.org/10.1371/journal.pone.0029968openalex-snapshot
Iron Availability Increases the Pathogenic Potential of Salmonella Typhimurium and Other Enteric Pathogens at the Intestinal Epithelial Interface
inferredcites →https://doi.org/10.1371/journal.pone.0066386openalex-snapshot
The Carbon Storage Regulator (Csr) System Exerts a Nutrient-Specific Control over Central Metabolism in Escherichia coli Strain Nissle 1917
inferredcites →https://doi.org/10.1371/journal.pone.0142927openalex-snapshot
Aetiology-Specific Estimates of the Global and Regional Incidence and Mortality of Diarrhoeal Diseases Commonly Transmitted through Food
inferredcites →https://doi.org/10.1371/journal.pone.0145035openalex-snapshot
Genomic Targets and Features of BarA-UvrY (-SirA) Signal Transduction Systems
inferredcites →https://doi.org/10.1371/journal.ppat.1000306openalex-snapshot
Coordinated Regulation of Virulence during Systemic Infection of Salmonella enterica Serovar Typhimurium
inferredcites →https://doi.org/10.1371/journal.ppat.1003301openalex-snapshot
Parallel Exploitation of Diverse Host Nutrients Enhances Salmonella Virulence
inferredcites →https://doi.org/10.1371/journal.ppat.1004209openalex-snapshot
Fructose-Asparagine Is a Primary Nutrient during Growth of Salmonella in the Inflamed Intestine
inferredcites →https://doi.org/10.1371/journal.ppat.1005262openalex-snapshot
RNA-seq Brings New Insights to the Intra-Macrophage Transcriptome of Salmonella Typhimurium
inferredcites →https://doi.org/10.1371/journal.ppat.1006129openalex-snapshot
Respiration of Microbiota-Derived 1,2-propanediol Drives Salmonella Expansion during Colitis
inferredcites →https://doi.org/10.1371/journal.ppat.1006497openalex-snapshot
The transcriptional regulator SsrB is involved in a molecular switch controlling virulence lifestyles of Salmonella
inferredcites →https://doi.org/10.15252/embj.201593360openalex-snapshot
Global RNA recognition patterns of post‐transcriptional regulators Hfq and CsrA revealed by UV crosslinking in vivo
inferredcites →https://doi.org/10.3389/fcimb.2014.00191openalex-snapshot
Salmonella—how a metabolic generalist adopts an intracellular lifestyle during infection
inferredcites →https://doi.org/10.3389/fcimb.2017.00335openalex-snapshot
What the SIF Is Happening—The Role of Intracellular Salmonella-Induced Filaments
inferredcites →https://doi.org/10.3389/fmicb.2011.00129openalex-snapshot
The Role of the spv Genes in Salmonella Pathogenesis
inferredcites →https://doi.org/10.3389/fmicb.2013.00331openalex-snapshot
Mechanisms of survival, responses and sources of Salmonella in low-moisture environments
inferredcites →https://doi.org/10.3389/fmicb.2015.00949openalex-snapshot
Regulatory principles governing Salmonella and Yersinia virulence
inferredcites →https://doi.org/10.4315/0362-028x.jfp-11-417openalex-snapshot
Annual Cost of Illness and Quality-Adjusted Life Year Losses in the United States Due to 14 Foodborne Pathogens
inferredcites →https://doi.org/10.7554/elife.01501openalex-snapshot
A serine sensor for multicellularity in a bacterium
inferredcites →https://doi.org/10.7554/elife.10747openalex-snapshot
The horizontally-acquired response regulator SsrB drives a Salmonella lifestyle switch by relieving biofilm silencing
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.2139/ssrn.4142367openalex-extracted
The Sub-Inhibitory Effect of Azithromycin and Ciprofloxacin on VirF Gene Expression in Enteroinvasive Escherichia Coli and Shigella Flexneri
inferred← citeshttps://doi.org/10.1002/1873-3468.14853openalex-snapshot
Global transcriptome analysis reveals Salmonella Typhimurium employs nitrate metabolism to combat bile stress
inferred← citeshttps://doi.org/10.1007/s11274-025-04383-xopenalex-snapshot
Targeted inhibition of E. coli adhesion using antisense oligonucleotides: an approach to combat bacteria via CsrB targeting
inferred← citeshttps://doi.org/10.1016/j.biotechadv.2021.107887openalex-snapshot
Feedback regulation and coordination of the main metabolism for bacterial growth and metabolic engineering for amino acid fermentation
inferred← citeshttps://doi.org/10.1016/j.ifset.2024.103633openalex-snapshot
Isolation and characterization of resistant variants of Salmonella Typhimurium after sequential exposure to plasma activated water (PAW)
inferred← citeshttps://doi.org/10.1016/j.jmb.2019.03.016openalex-snapshot
The Many Facets of the Small Non-coding RNA RsaE (RoxS) in Metabolic Niche Adaptation of Gram-Positive Bacteria
inferred← citeshttps://doi.org/10.1016/j.jprot.2023.104960openalex-snapshot
Proteomic analysis reveals the global effect of the BarA/SirA-Csr regulatory cascade in Salmonella Typhimurium grown in conditions that favor the expression of invasion genes
inferred← citeshttps://doi.org/10.1016/j.mib.2020.05.009openalex-snapshot
Who’s in control? Regulation of metabolism and pathogenesis in space and time
inferred← citeshttps://doi.org/10.1016/j.micres.2024.127926openalex-snapshot
Expression, regulation and physiological roles of the five Rsm proteins in Pseudomonas syringae pv. tomato DC3000
inferred← citeshttps://doi.org/10.1016/j.tig.2020.09.014openalex-snapshot
Keeping Up with RNA-Based Regulation in Bacteria: New Roles for RNA Binding Proteins
inferred← citeshttps://doi.org/10.1021/acs.jcim.2c00037openalex-snapshot
Recognition and Binding of RsmE to an AGGAC Motif of RsmZ: Insights from Molecular Dynamics Simulations
inferred← citeshttps://doi.org/10.1021/acssynbio.4c00668openalex-snapshot
Concentration-Dependent CsrA Regulation of the uxuB Transcript Leads to Development of a Post-Transcriptional Bandpass Filter
inferred← citeshttps://doi.org/10.1073/pnas.2308814121openalex-snapshot
Improved RNA stability estimation through Bayesian modeling reveals most Salmonella transcripts have subminute half-lives
inferred← citeshttps://doi.org/10.1093/bib/bbab549openalex-snapshot
RiboReport - benchmarking tools for ribosome profiling-based identification of open reading frames in bacteria
inferred← citeshttps://doi.org/10.1093/bioinformatics/btaa959openalex-snapshot
HRIBO: high-throughput analysis of bacterial ribosome profiling data
inferred← citeshttps://doi.org/10.1093/femsml/uqab001openalex-snapshot
An overview ofSalmonella entericametal homeostasis pathways during infection
inferred← citeshttps://doi.org/10.1099/jmm.0.001804openalex-snapshot
STnc1280, a trans-coding sRNA is involved in virulence modulation via targeting gldA mRNA in Salmonella Typhimurium
inferred← citeshttps://doi.org/10.1099/jmm.0.002206openalex-snapshot
Convergent methodologies in prosthetic joint infection research: integrating transdisciplinary approaches to understand and prevent biofilm-driven failure of orthopaedic prostheses
inferred← citeshttps://doi.org/10.1099/mgen.0.001017openalex-snapshot
Genome-wide fitness analysis identifies genes required for in vitro growth and macrophage infection by African and global epidemic pathovariants of Salmonella enterica Enteritidis
inferred← citeshttps://doi.org/10.1099/mgen.0.001403openalex-snapshot
Isolation, complete characterization and phylogeography of the first bacteriophage against Vibrio neocaledonicus, which encodes a pyruvate phosphate dikinase and represents a novel viral family
inferred← citeshttps://doi.org/10.1099/mic.0.001354openalex-snapshot
Evolution of cyclic di-GMP signalling on a short and long term time scale
inferred← citeshttps://doi.org/10.1101/2023.06.15.545048openalex-snapshot
Global transcriptome analysis reveals Salmonella Typhimurium employs the nitrate-dependent anaerobic pathway to combat bile stress
inferred← citeshttps://doi.org/10.1101/2024.08.01.606018openalex-snapshot
Thermodynamic modeling of Csr/Rsm- RNA interactions capture novel, direct binding interactions across the Pseudomonas aeruginosa transcriptome
inferred← citeshttps://doi.org/10.1101/2024.09.28.615595openalex-snapshot
Concentration dependent CsrA regulation of the uxuB transcript leads to development of post-transcriptional BANDPASS Filter
inferred← citeshttps://doi.org/10.1111/1462-2920.15558openalex-snapshot
Distinctive features of the Gac‐Rsm pathway in plant‐associated Pseudomonas
inferred← citeshttps://doi.org/10.1111/1541-4337.70439openalex-snapshot
How Salmonella Works Under Osmotic and Desiccation Stresses
inferred← citeshttps://doi.org/10.1111/1758-2229.12930openalex-snapshot
Pathogenesis of Salmonella Newport to BALB /c mice when internalized into cherry tomatoes
inferred← citeshttps://doi.org/10.1111/mmi.70016openalex-snapshot
A Small RNA Derived From the 5′ End of the IS 200 tnpA Transcript Regulates Multiple Virulence Regulons in Salmonella typhimurium
inferred← citeshttps://doi.org/10.1128/jb.00294-21openalex-snapshot
Identifying Small Open Reading Frames in Prokaryotes with Ribosome Profiling
inferred← citeshttps://doi.org/10.1128/jb.00354-23openalex-snapshot
Multitier regulation of the E. coli extreme acid stress response by CsrA
inferred← citeshttps://doi.org/10.1128/mbio.00849-20openalex-snapshot
CsrA-Mediated Translational Activation of ymdA Expression in Escherichia coli
inferred← citeshttps://doi.org/10.1128/mbio.01034-19openalex-snapshot
Regulation of Iron Storage by CsrA Supports Exponential Growth of Escherichia coli
inferred← citeshttps://doi.org/10.1128/mbio.02853-24openalex-snapshot
Vibrio cholerae CsrA controls ToxR levels by increasing the stability and translation of toxR mRNA
inferred← citeshttps://doi.org/10.1128/mbio.03380-20openalex-snapshot
Regulatory Effects of CsrA in Vibrio cholerae
inferred← citeshttps://doi.org/10.1128/msphere.00018-24openalex-snapshot
ProQ-dependent activation of Salmonella virulence genes mediated by post-transcriptional control of PhoP synthesis
inferred← citeshttps://doi.org/10.1128/spectrum.01296-21openalex-snapshot
CsrA Coordinates Compatible Solute Synthesis in Acinetobacter baumannii and Facilitates Growth in Human Urine
inferred← citeshttps://doi.org/10.1128/spectrum.01516-23openalex-snapshot
CsrA Positively and Directly Regulates the Expression of the pdu , pocR , and eut Genes Required for the Luminal Replication of Salmonella Typhimurium
inferred← citeshttps://doi.org/10.1371/journal.pgen.1008722openalex-snapshot
The phosphorelay BarA/SirA activates the non-cognate regulator RcsB in Salmonella enterica
inferred← citeshttps://doi.org/10.1371/journal.pone.0260981openalex-snapshot
Investigating the role of the carbon storage regulator A (CsrA) in Leptospira spp.
inferred← citeshttps://doi.org/10.21203/rs.3.rs-1644336/v1openalex-snapshot
The Sub-Inhibitory effect of azithromycin and ciprofloxacin on virF gene expression in Enteroinvasive Escherichia coli and Shigella Flexneri
inferred← citeshttps://doi.org/10.2174/1566523220999201230204814openalex-snapshot
Potential Non-coding RNAs from Microorganisms and their Therapeutic Use in the Treatment of Different Human Cancers
inferred← citeshttps://doi.org/10.3389/fcimb.2019.00270openalex-snapshot
Salmonella Pathogenicity Island 1 (SPI-1) and Its Complex Regulatory Network
inferred← citeshttps://doi.org/10.3389/fcimb.2025.1503337openalex-snapshot
Advances in sRNA-mediated regulation of Salmonella infection in the host
inferred← citeshttps://doi.org/10.3389/fmicb.2019.02704openalex-snapshot
Rugose Morphotype in Salmonella Typhimurium and Salmonella Heidelberg Induced by Sequential Exposure to Subinhibitory Sodium Hypochlorite Aids in Biofilm Tolerance to Lethal Sodium Hypochlorite on Polystyrene and Stainless Steel Surfaces
inferred← citeshttps://doi.org/10.3389/fmicb.2020.531596openalex-snapshot
Binding of Campylobacter jejuni FliW Adjacent to the CsrA RNA-Binding Pockets Modulates CsrA Regulatory Activity
inferred← citeshttps://doi.org/10.3389/fmicb.2020.601352openalex-snapshot
Diverse Mechanisms and Circuitry for Global Regulation by the RNA-Binding Protein CsrA
inferred← citeshttps://doi.org/10.3389/fmicb.2025.1534446openalex-snapshot
The role of CsrA in controls the extracellular electron transfer and biofilm production in Geobacter sulfurreducens
inferred← citeshttps://doi.org/10.3389/fmolb.2020.00127openalex-snapshot
Comparative Genomics and Evolutionary Analysis of RNA-Binding Proteins of the CsrA Family in the Genus Pseudomonas
inferred← citeshttps://doi.org/10.3389/fmolb.2025.1493891openalex-snapshot
Thermodynamic modeling of RsmA - mRNA interactions capture novel direct binding across the Pseudomonas aeruginosa transcriptome
inferred← citeshttps://doi.org/10.3390/foods10030617openalex-snapshot
Impact of the Resistance Responses to Stress Conditions Encountered in Food and Food Processing Environments on the Virulence and Growth Fitness of Non-Typhoidal Salmonellae
inferred← citeshttps://doi.org/10.3390/ijms23052570openalex-snapshot
Combined Transcriptomic and Proteomic Profiling of E. coli under Microaerobic versus Aerobic Conditions: The Multifaceted Roles of Noncoding Small RNAs and Oxygen-Dependent Sensing in Global Gene Expression Control
inferred← citeshttps://doi.org/10.3390/microorganisms9112383openalex-snapshot
CsrA Regulates Swarming Motility and Carbohydrate and Amino Acid Metabolism in Vibrio alginolyticus
inferred← citeshttps://doi.org/10.5812/archcid-145666openalex-snapshot
The Sub-inhibitory Effect of Azithromycin and Ciprofloxacin on virF Gene Expression in Enteroinvasive Escherichia coli and Shigella flexneri
inferred← citeshttps://doi.org/10.58837/chula.the.2020.307openalex-snapshot
Characterization of Carbon Storage Regulator A (CsrA) homolog as a global gene regulator in Leptospira spp.
inferred← citeshttps://doi.org/10.64898/2026.02.05.704111openalex-snapshot
Modeling binding of the conserved Csr/Rsm protein family across species of the γ-proteobacteria reveals niche-specific adaptation of the post-transcriptional regulon
inferred← citeshttps://doi.org/10.70675/ff6164c4zfbe1z4759z82b2z526bf3f563deopenalex-snapshot
Roles of regulatory RNAs in Vibrio pathogenic to species of aquaculture interest
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